Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 193 results

3Q0W
DownloadVisualize
BU of 3q0w by Molmil
ETHR From mycobacterium tuberculosis in complex with compound BDM33066
Descriptor: (2S)-2-amino-3-methyl-1-{4-[3-(thiophen-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}butan-1-one, GLYCEROL, HTH-type transcriptional regulator EthR
Authors:Flipo, M, Desrose, M, Dirie, B, Carette, X, Leroux, F, Lens, Z, Rucktooa, P, Piveteau, C, Demirkaya, F, Locht, C, Villeret, V, Christophe, T, Jeon, H.K, Brodin, P, Deprez, B, Baulard, A, Willand, N.
Deposit date:2010-12-16
Release date:2011-12-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural activation of the transcriptional repressor EthR from Mycobacterium tuberculosis by single amino acid change mimicking natural and synthetic ligands.
Nucleic Acids Res., 40, 2012
2KRM
DownloadVisualize
BU of 2krm by Molmil
RDC refined solution structure of the first SH3 domain of CD2AP
Descriptor: CD2-associated protein
Authors:Ortega Roldan, J.A.J, Azuaga, A.I, van Nuland, N.A.J.
Deposit date:2009-12-21
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure, Dynamics and Thermodynamics of the three SH3 domains of CD2AP
To be Published
2KRO
DownloadVisualize
BU of 2kro by Molmil
RDC refined high resolution structure of the third SH3 domain of CD2AP
Descriptor: CD2-associated protein
Authors:Ortega Roldan, J, Azuaga, A.I, van Nuland, N.A.J, Blackledge, M.
Deposit date:2009-12-21
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure, Dynamics and Thermodynamics of the three SH3 domains of CD2AP
To be Published
1TQM
DownloadVisualize
BU of 1tqm by Molmil
Crystal Structure of A. fulgidus Rio2 Serine Protein Kinase Bound to AMPPNP
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, conserved hypothetical protein
Authors:LaRonde-LeBlanc, N, Wlodawer, A.
Deposit date:2004-06-17
Release date:2004-09-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal Structure of A. fulgidus Rio2 Defines a New Family of Serine Protein Kinases
Structure, 12, 2004
1TQI
DownloadVisualize
BU of 1tqi by Molmil
Crystal Structure of A. Fulgidus Rio2 Serine Protein Kinase
Descriptor: 1,2-ETHANEDIOL, conserved hypothetical protein
Authors:LaRonde-LeBlanc, N, Wlodawer, A.
Deposit date:2004-06-17
Release date:2004-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of A. fulgidus Rio2 Defines a New Family of Serine Protein Kinases
Structure, 12, 2004
3PCI
DownloadVisualize
BU of 3pci by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-IODO-4-HYDROXYBENZOATE
Descriptor: 3-IODO-4-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Elango, N, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-02
Release date:1998-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
3PCH
DownloadVisualize
BU of 3pch by Molmil
STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-CHLORO-4-HYDROXYBENZOATE
Descriptor: 3-CHLORO-4-HYDROXYBENZOIC ACID, BETA-MERCAPTOETHANOL, FE (III) ION, ...
Authors:Orville, A.M, Elango, N, Lipscomb, J.D, Ohlendorf, D.H.
Deposit date:1997-07-01
Release date:1998-01-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of competitive inhibitor complexes of protocatechuate 3,4-dioxygenase: multiple exogenous ligand binding orientations within the active site.
Biochemistry, 36, 1997
2JZW
DownloadVisualize
BU of 2jzw by Molmil
How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription
Descriptor: DNA (5'-D(*DGP*DTP*DCP*DCP*DCP*DTP*DGP*DTP*DTP*DCP*DGP*DGP*DGP*DC)-3'), HIV-1 nucleocapsid protein NCp7(12-55), ZINC ION
Authors:Bourbigot, S, Ramalanjaona, N, Salgado, G.F.J, Mely, Y, Roques, B.P, Bouaziz, S, Morellet, N.
Deposit date:2008-01-21
Release date:2009-01-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription.
J.Mol.Biol., 383, 2008
2JMC
DownloadVisualize
BU of 2jmc by Molmil
Chimer between Spc-SH3 and P41
Descriptor: Spectrin alpha chain, brain and P41 peptide chimera
Authors:van Nuland, N.A.J, Candel, A.M, Martinez, J.C, Conejero-Lara, F, Bruix, M.
Deposit date:2006-11-02
Release date:2007-04-24
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The high-resolution NMR structure of a single-chain chimeric protein mimicking a SH3-peptide complex
Febs Lett., 581, 2007
2JTE
DownloadVisualize
BU of 2jte by Molmil
Third SH3 domain of CD2AP
Descriptor: CD2-associated protein
Authors:van Nuland, N.A.J, Ortega, R.J, Romero Romero, M, Ab, E, Ora, A, Lopez, M.O, Azuaga, A.I.
Deposit date:2007-07-28
Release date:2007-12-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The high resolution NMR structure of the third SH3 domain of CD2AP.
J.Biomol.Nmr, 39, 2007
2JM9
DownloadVisualize
BU of 2jm9 by Molmil
R21A Spc-SH3 bound
Descriptor: Spectrin alpha chain, brain
Authors:van Nuland, N.A.J, Casares, S, Ab, E, Eshuis, H, Lopez-Mayorga, O, Conejero-Lara, F.
Deposit date:2006-10-25
Release date:2007-04-24
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The high-resolution NMR structure of the R21A Spc-SH3:P41 complex: Understanding the determinants of binding affinity by comparison with Abl-SH3
Bmc Struct.Biol., 7, 2007
2JMA
DownloadVisualize
BU of 2jma by Molmil
R21A Spc-SH3:P41 complex
Descriptor: P41 peptide, Spectrin alpha chain, brain
Authors:van Nuland, N.A.J, Casares, S, Ab, E, Eshuis, H, Lopez-Mayorga, O, Conejero-Lara, F.
Deposit date:2006-10-25
Release date:2007-04-24
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The high-resolution NMR structure of the R21A Spc-SH3:P41 complex: Understanding the determinants of binding affinity by comparison with Abl-SH3
Bmc Struct.Biol., 7, 2007
2BS6
DownloadVisualize
BU of 2bs6 by Molmil
LECTIN FROM RALSTONIA SOLANACEARUM COMPLEXED WITH XYLOGLUCAN FRAGMENT
Descriptor: GLYCEROL, LECTIN, alpha-L-fucopyranose, ...
Authors:Mitchell, E.P, Kostlanova, N, Wimmerova, M, Imberty, A.
Deposit date:2005-05-18
Release date:2005-05-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The fucose-binding lectin from Ralstonia solanacearum. A new type of beta-propeller architecture formed by oligomerization and interacting with fucoside, fucosyllactose, and plant xyloglucan.
J. Biol. Chem., 280, 2005
1PFH
DownloadVisualize
BU of 1pfh by Molmil
THE PHOSPHORYLATED FORM OF THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR
Descriptor: PHOSPHO-HPR
Authors:Van Nuland, N.A.J, Scheek, R.M, Robillard, G.T.
Deposit date:1995-08-18
Release date:1995-11-14
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:High-resolution structure of the phosphorylated form of the histidine-containing phosphocarrier protein HPr from Escherichia coli determined by restrained molecular dynamics from NMR-NOE data.
J.Mol.Biol., 246, 1995
1PG5
DownloadVisualize
BU of 1pg5 by Molmil
CRYSTAL STRUCTURE OF THE UNLIGATED (T-STATE) ASPARTATE TRANSCARBAMOYLASE FROM THE EXTREMELY THERMOPHILIC ARCHAEON SULFOLOBUS ACIDOCALDARIUS
Descriptor: Aspartate carbamoyltransferase, Aspartate carbamoyltransferase regulatory chain, ZINC ION
Authors:De Vos, D, Van Petegem, F, Remaut, H, Legrain, C, Glansdorff, N, Van Beeumen, J.J.
Deposit date:2003-05-27
Release date:2004-06-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of T State Aspartate Carbamoyltransferase of the Hyperthermophilic Archaeon Sulfolobus acidocaldarius.
J.Mol.Biol., 339, 2004
4JIN
DownloadVisualize
BU of 4jin by Molmil
X-ray crystal structure of Archaeoglobus fulgidus Rio1 bound to (2E)-N-benzyl-2-cyano-3-(pyridine-4-yl)acrylamide (WP1086)
Descriptor: (2E)-N-benzyl-2-cyano-3-(pyridin-4-yl)prop-2-enamide, RIO-type serine/threonine-protein kinase Rio1
Authors:Mielecki, M, Krawiec, K, Kiburu, I, Grzelak, K, Wlodzimierz, Z, Kierdaszuk, B, Kowa, K, Fokt, I, Szymanski, S, Piotr, S, Szeja, W, Priebe, W, Lesyng, B, LaRonde-LeBlanc, N.
Deposit date:2013-03-06
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Development of novel molecular probes of the Rio1 atypical protein kinase.
Biochim.Biophys.Acta, 1834, 2013
1PVV
DownloadVisualize
BU of 1pvv by Molmil
Refined Structure of Pyrococcus furiosus Ornithine Carbamoyltransferase at 1.87 A
Descriptor: Ornithine carbamoyltransferase, SULFATE ION
Authors:Massant, J, Wouters, J, Glansdorff, N.
Deposit date:2003-06-29
Release date:2003-12-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Refined structure of Pyrococcus furiosus ornithine carbamoyltransferase at 1.87 A.
Acta Crystallogr.,Sect.D, 59, 2003
1ODB
DownloadVisualize
BU of 1odb by Molmil
THE CRYSTAL STRUCTURE OF HUMAN S100A12 - COPPER COMPLEX
Descriptor: CALCIUM ION, CALGRANULIN C, COPPER (II) ION
Authors:Moroz, O.V, Antson, A.A, Grist, S.J, Maitland, N.J, Dodson, G.G, Wilson, K.S, Lukanidin, E.M, Bronstein, I.B.
Deposit date:2003-02-15
Release date:2003-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure of the Human S100A12-Copper Complex: Implications for Host-Parasite Defence
Acta Crystallogr.,Sect.D, 59, 2003
1XFQ
DownloadVisualize
BU of 1xfq by Molmil
structure of the blue shifted intermediate state of the photoactive yellow protein lacking the N-terminal part
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
Deposit date:2004-09-15
Release date:2005-08-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
1XGV
DownloadVisualize
BU of 1xgv by Molmil
Isocitrate Dehydrogenase from the hyperthermophile Aeropyrum pernix
Descriptor: Isocitrate dehydrogenase
Authors:Karlstrom, M, Stokke, R, Steen, I.H, Birkeland, N.-K, Ladenstein, R.
Deposit date:2004-09-17
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix: X-ray structure analysis of a ternary enzyme-substrate complex and thermal stability
J.Mol.Biol., 345, 2005
1XFN
DownloadVisualize
BU of 1xfn by Molmil
NMR structure of the ground state of the photoactive yellow protein lacking the N-terminal part
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Bernard, C, Houben, K, Derix, N.M, Marks, D, van der Horst, M.A, Hellingwerf, K.J, Boelens, R, Kaptein, R, van Nuland, N.A.
Deposit date:2004-09-15
Release date:2005-08-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The solution structure of a transient photoreceptor intermediate: delta25 photoactive yellow protein
STRUCTURE, 13, 2005
1XKD
DownloadVisualize
BU of 1xkd by Molmil
Ternary complex of Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix
Descriptor: CALCIUM ION, ISOCITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Karlstrom, M, Stokke, R, Steen, I.H, Birkeland, N.-K, Ladenstein, R.
Deposit date:2004-09-28
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Isocitrate dehydrogenase from the hyperthermophile Aeropyrum pernix: X-ray structure analysis of a ternary enzyme-substrate complex and thermal stability.
J.Mol.Biol., 345, 2005
3Q0V
DownloadVisualize
BU of 3q0v by Molmil
ETHR From mycobacterium tuberculosis in complex with compound bdm31369
Descriptor: 4-methyl-1-{4-[3-(thiophen-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}pentan-1-one, HTH-type transcriptional regulator EthR
Authors:Flipo, M, Desroses, M, Dirie, B, Carette, X, Leroux, F, Lens, Z, Rucktooa, P, Leroux, F, Piveteau, C, Demirkaya, F, Locht, C, Villeret, V, Christophe, T, Jeon, H.K, Brodin, P, Deprez, B, Baulard, A, Willand, N.
Deposit date:2010-12-16
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Design, synthesis and optimization of new EthR inhibitors. A new alternative approach to fight tuberculosis by boosting ethionamide
To be Published
1OF9
DownloadVisualize
BU of 1of9 by Molmil
Solution structure of the pore forming toxin of entamoeba histolytica (Amoebapore A)
Descriptor: PORE-FORMING PEPTIDE AMEOBAPORE A
Authors:Hecht, O, Schleinkofer, K, Bruhn, H, Leippe, M, Van Nuland, N, Dingley, A.J, Grotzinger, J.
Deposit date:2003-04-09
Release date:2004-02-26
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the Pore-Forming Protein of Entamoeba Histolytica
J.Biol.Chem., 279, 2004
3Q0U
DownloadVisualize
BU of 3q0u by Molmil
EthR from Mycobacterium tuberculosis in complex with compound BDM31379
Descriptor: 2-phenyl-1-{4-[3-(thiophen-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}ethanone, HTH-type transcriptional regulator EthR
Authors:Flipo, M, Desroses, M, Dirie, B, Carette, X, Lens, Z, Rucktooa, P, Leroux, F, Piveteau, C, Demirkaya, F, Locht, C, Villeret, V, Christophe, T, Jeon, H.K, Brodin, P, Deprez, B, Baulard, A, Willand, N.
Deposit date:2010-12-16
Release date:2012-01-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design, synthesis and optimization of new EthR inhibitors. A new alternative approach to fight tuberculosis by boosting ethionamide
To be Published

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon