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PDB: 985 件

4ZUU
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Crystal structure of Equine MHC I(Eqca-N*00602) in complexed with equine infectious anaemia virus (EIAV) derived peptide Gag-CF9
分子名称: Beta-2-microglobulin, CYS-THR-SER-GLU-GLU-MET-ASN-ALA-PHE, Classical MHC class I antigen
著者Yao, S, Liu, J, Qi, J, Chen, R, Zhang, N, Liu, Y, Xia, C.
登録日2015-05-17
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Illumination of Equine MHC Class I Molecules Highlights Unconventional Epitope Presentation Manner That Is Evolved in Equine Leukocyte Antigen Alleles
J Immunol., 196, 2016
4ZUV
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Crystal structure of Equine MHC I(Eqca-N*00602) in complexed with equine infectious anaemia virus (EIAV) derived peptide Env-RW12
分子名称: ARG-VAL-GLU-ASP-VAL-THR-ASN-THR-ALA-GLU-TYR-TRP, Beta-2-microglobulin, Classical MHC class I antigen
著者Yao, S, Liu, J, Qi, J, Chen, R, Zhang, N, Liu, Y, Xia, C.
登録日2015-05-17
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Illumination of Equine MHC Class I Molecules Highlights Unconventional Epitope Presentation Manner That Is Evolved in Equine Leukocyte Antigen Alleles
J Immunol., 196, 2016
1C76
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STAPHYLOKINASE (SAK) MONOMER
分子名称: STAPHYLOKINASE
著者Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
登録日2000-02-01
公開日2000-08-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Staphylokinase Dimer Offers New Clue to Reduction of Immunogenicity
To be published
5OFB
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Crystal structure of human MORC2 (residues 1-603) with spinal muscular atrophy mutation S87L
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MORC family CW-type zinc finger protein 2, ...
著者Douse, C.H, Liu, Y, Modis, Y.
登録日2017-07-10
公開日2018-02-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Neuropathic MORC2 mutations perturb GHKL ATPase dimerization dynamics and epigenetic silencing by multiple structural mechanisms.
Nat Commun, 9, 2018
4ZUS
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Crystal structure of Equine MHC I(Eqca-N*00602) in complexed with equine infectious anaemia virus (EIAV) derived peptide REV-QW11
分子名称: Beta-2-microglobulin, Classical MHC class I antigen, GLN-ALA-GLU-VAL-LEU-GLN-GLU-ARG-LEU-GLU-TRP
著者Yao, S, Liu, J, Qi, J, Chen, R, Zhang, N, Liu, Y, Xia, C.
登録日2015-05-17
公開日2016-04-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Illumination of Equine MHC Class I Molecules Highlights Unconventional Epitope Presentation Manner That Is Evolved in Equine Leukocyte Antigen Alleles
J Immunol., 196, 2016
4ZUW
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BU of 4zuw by Molmil
Crystal structure of Equine MHC I(Eqca-N*00601) in complexed with equine infectious anaemia virus (EIAV) derived peptide Gag-GW12
分子名称: Beta-2-microglobulin, Classical MHC class I antigen, GLY-SER-GLN-LYS-LEU-THR-THR-GLY-ASN-CYS-ASN-TRP
著者Yao, S, Liu, J, Qi, J, Chen, R, Zhang, N, Liu, Y, Xia, C.
登録日2015-05-17
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Illumination of Equine MHC Class I Molecules Highlights Unconventional Epitope Presentation Manner That Is Evolved in Equine Leukocyte Antigen Alleles
J Immunol., 196, 2016
4ZUT
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BU of 4zut by Molmil
Crystal structure of Equine MHC I(Eqca-N*00602) in complexed with equine infectious anaemia virus (EIAV) derived peptide Gag-GW12
分子名称: Beta-2-microglobulin, Classical MHC class I antigen, GLY-SER-GLN-LYS-LEU-THR-THR-GLY-ASN-CYS-ASN-TRP
著者Yao, S, Liu, J, Qi, J, Chen, R, Zhang, N, Liu, Y, Xia, C.
登録日2015-05-17
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Illumination of Equine MHC Class I Molecules Highlights Unconventional Epitope Presentation Manner That Is Evolved in Equine Leukocyte Antigen Alleles
J Immunol., 196, 2016
3QWY
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CED-2
分子名称: Cell death abnormality protein 2, GLYCEROL, SULFATE ION
著者Kang, Y, Sun, J, Liu, Y, Sun, D, Hu, Y, Liu, Y.F.
登録日2011-02-28
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Crystal structure of the cell corpse engulfment protein CED-2 in Caenorhabditis elegans.
Biochem.Biophys.Res.Commun., 410, 2011
3M03
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Crystal structure of human Orc6 fragment
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Origin recognition complex subunit 6, SULFATE ION
著者Liu, S.X, Wu, L.J, Sun, J, Wang, H.F, Liu, Y.F.
登録日2010-03-02
公開日2011-03-09
最終更新日2014-03-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural analysis of human Orc6 protein reveals a homology with transcription factor TFIIB
Proc.Natl.Acad.Sci.USA, 108, 2011
1J48
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Crystal Structure of Apo-C1027
分子名称: Apoprotein of C1027
著者Chen, Y, Li, J, Liu, Y, Bartlam, M, Gao, Y, Jin, L, Tang, H, Shao, Y, Zhen, Y, Rao, Z.
登録日2001-07-30
公開日2003-06-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Apo-C1027 and Computer Modeling Analysis of C1027 Chromophore- Protein Complex
To be published
1NXK
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BU of 1nxk by Molmil
Crystal structure of staurosporine bound to MAP KAP kinase 2
分子名称: MAP kinase-activated protein kinase 2, STAUROSPORINE, SULFATE ION
著者Underwood, K.W, Parris, K.D, Federico, E, Mosyak, L, Czerwinski, R.M, Shane, T, Taylor, M, Svenson, K, Liu, Y, Hsiao, C.L, Wolfrom, S, Malakian, K, Telliez, J.B, Lin, L.L, Kriz, R.W, Seehra, J, Somers, W.S, Stahl, M.L.
登録日2003-02-10
公開日2003-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Catalytically active MAP KAP kinase 2 structures in complex with staurosporine and ADP reveal differences with the autoinhibited enzyme
Structure, 11, 2003
8XEG
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Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom.
分子名称: Capsid protein VP1
著者Zhang, R, Liu, Y, Lou, Z.
登録日2023-12-12
公開日2024-01-24
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (1.76 Å)
主引用文献Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
8V3N
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CCP5 in complex with Glu-P-Glu transition state analog
分子名称: (2S)-2-{[(S)-[(3S)-3-acetamido-4-(ethylamino)-4-oxobutyl](hydroxy)phosphoryl]methyl}pentanedioic acid, Cytosolic carboxypeptidase-like protein 5, D-MALATE, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3O
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CCP5 in complex with Glu-P-peptide 1 transition state analog
分子名称: Cytosolic carboxypeptidase-like protein 5, D-MALATE, POTASSIUM ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3P
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CCP5 in complex with Glu-P-peptide 2 transition state analog
分子名称: Cytosolic carboxypeptidase-like protein 5, Tubulin beta-2A chain, ZINC ION
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
8V3Q
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Structure of CCP5 class1
分子名称: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
著者Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
登録日2023-11-28
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Tubulin code eraser CCP5 binds branch glutamates by substrate deformation
Nature, 2024
6GRC
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eukaryotic junction-resolving enzyme GEN-1 binding with Sodium
分子名称: DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), MAGNESIUM ION, ...
著者Lilley, D.M.J, Liu, Y, Freeman, D.J.
登録日2018-06-11
公開日2018-09-26
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.452 Å)
主引用文献A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018
6GRD
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eukaryotic junction-resolving enzyme GEN-1 binding with Cesium
分子名称: CESIUM ION, DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), ...
著者Lilley, D.M.J, Liu, Y, Freeman, D.J.
登録日2018-06-11
公開日2018-09-26
最終更新日2018-11-28
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018
6OJ0
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Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1)
分子名称: Structural protein VP4, Uncharacterized protein
著者Wang, F, Liu, Y, Conway, J.F, Krupovic, M, Prangishvili, D, Egelman, E.H.
登録日2019-04-10
公開日2019-10-02
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A packing for A-form DNA in an icosahedral virus.
Proc.Natl.Acad.Sci.USA, 116, 2019
1C78
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STAPHYLOKINASE (SAK) DIMER
分子名称: STAPHYLOKINASE
著者Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
登録日2000-02-01
公開日2000-08-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C77
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STAPHYLOKINASE (SAK) DIMER
分子名称: STAPHYLOKINASE
著者Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
登録日2000-02-01
公開日2000-08-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C79
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STAPHYLOKINASE (SAK) DIMER
分子名称: STAPHYLOKINASE
著者Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
登録日2000-02-01
公開日2000-08-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1VKL
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RABBIT MUSCLE PHOSPHOGLUCOMUTASE
分子名称: NICKEL (II) ION, PHOSPHOGLUCOMUTASE
著者Ray Junior, W.J, Baranidharan, S, Liu, Y.
登録日1996-07-03
公開日1997-01-11
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural changes at the metal ion binding site during the phosphoglucomutase reaction.
Biochemistry, 32, 1993
3H3B
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Crystal structure of the single-chain Fv (scFv) fragment of an anti-ErbB2 antibody chA21 in complex with residues 1-192 of ErbB2 extracellular domain
分子名称: Receptor tyrosine-protein kinase erbB-2, anti-ErbB2 antibody chA21
著者Zhou, H, Liu, Y, Niu, L, Zhu, J, Teng, M.
登録日2009-04-16
公開日2010-04-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Insights into the Down-regulation of Overexpressed p185her2/neu Protein of Transformed Cells by the Antibody chA21.
J.Biol.Chem., 286, 2011
6GRB
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eukaryotic junction-resolving enzyme GEN-1 binding with Potassium
分子名称: DNA (5'-D(*TP*AP*CP*CP*CP*AP*CP*CP*AP*CP*CP*GP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP*GP*T)-3'), MAGNESIUM ION, ...
著者Lilley, D.M.J, Liu, Y, Freeman, D.J.
登録日2018-06-11
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Nucleic Acids Res., 46, 2018

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