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PDB: 1191 件

3BW2
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Crystal structures and site-directed mutagenesis study of nitroalkane oxidase from Streptomyces ansochromogenes
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-nitropropane dioxygenase, FLAVIN MONONUCLEOTIDE
著者Li, Y.H, Gao, Z.Q, Hou, H.F.
登録日2008-01-08
公開日2009-01-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure and site-directed mutagenesis of a nitroalkane oxidase from Streptomyces ansochromogenes
Biochem.Biophys.Res.Commun., 405, 2011
1HQR
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BU of 1hqr by Molmil
CRYSTAL STRUCTURE OF A SUPERANTIGEN BOUND TO THE HIGH-AFFINITY, ZINC-DEPENDENT SITE ON MHC CLASS II
分子名称: HLA-DR ALPHA CHAIN, HLA-DR BETA CHAIN, MYELIN BASIC PROTEIN, ...
著者Li, Y, Li, H, Dimasi, N, Schlievert, P, Mariuzza, R.
登録日2000-12-19
公開日2001-01-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of a superantigen bound to the high-affinity, zinc-dependent site on MHC class II.
Immunity, 14, 2001
4XVJ
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BU of 4xvj by Molmil
STRUCTURE OF THE HEPATITIS C VIRUS ENVELOPE GLYCOPROTEIN E2 ANTIGENIC 2 REGION 412-423 BOUND TO THE BROADLY NEUTRALIZING ANTIBODY HC33.1
分子名称: HCV E2 antigen, antibody heavy chain variable domain, antibody light chain variable domain
著者Li, Y, Mariuzza, R.A.
登録日2015-01-27
公開日2015-03-11
最終更新日2016-12-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for penetration of the glycan shield of hepatitis C virus e2 glycoprotein by a broadly neutralizing human antibody.
J.Biol.Chem., 290, 2015
5YYF
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BU of 5yyf by Molmil
Crystal structure of AF9 YEATS domain in complex with a peptide inhibitor "PHQ-H3(Q5-K9)" modified at K9 with 2-furancarboyl group
分子名称: 2-FUROIC ACID, Peptide inhibitor PHQ-H3(Q5-K9), Protein AF-9, ...
著者Li, Y, Li, H.
登録日2017-12-09
公開日2018-11-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Structure-guided development of YEATS domain inhibitors by targeting pi-pi-pi stacking.
Nat. Chem. Biol., 14, 2018
6IUS
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BU of 6ius by Molmil
A higher kcat Rubisco
分子名称: Ribulose-1,5-bisphosphate carboxylase/oxygenase
著者Li, Y, Cai, Z.
登録日2018-11-30
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献A higher kcat Rubisco
To Be Published
4N4H
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BU of 4n4h by Molmil
Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha in complex with histone H3.1K36me3
分子名称: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Peptide from Histone H3.1, ...
著者Li, Y, Ren, Y, Li, H.
登録日2013-10-08
公開日2014-03-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
Nature, 508, 2014
4N4G
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BU of 4n4g by Molmil
Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha
分子名称: PHOSPHATE ION, ZINC ION, Zinc finger MYND domain-containing protein 11
著者Li, Y, Ren, Y, Li, H.
登録日2013-10-08
公開日2014-03-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression
Nature, 508, 2014
8GPX
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BU of 8gpx by Molmil
YFV_E_YD73Fab_postfusion
分子名称: Envelope protein, YD73Fab_H, YD73Fab_K
著者Li, Y, Wu, L, Chai, Y, Qi, J, Yan, J, Gao, G.F.
登録日2022-08-27
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A neutralizing-protective supersite of human monoclonal antibodies for yellow fever virus.
Innovation (N Y), 3, 2022
8GPU
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BU of 8gpu by Molmil
YFV_E_YD6Fab_prefusion
分子名称: Envelope protein, YD6Fab_H, YD6Fab_L
著者Li, Y, Wu, L, Qi, J, Yan, J, Gao, G.F.
登録日2022-08-27
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献A neutralizing-protective supersite of human monoclonal antibodies for yellow fever virus.
Innovation (N Y), 3, 2022
6H8Q
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BU of 6h8q by Molmil
Structural basis for Scc3-dependent cohesin recruitment to chromatin
分子名称: Cohesin subunit SCC3, DNA (5'-D(P*CP*TP*TP*TP*CP*GP*TP*TP*TP*CP*CP*TP*TP*GP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*CP*AP*AP*GP*GP*AP*AP*AP*CP*GP*AP*AP*AP*G)-3'), ...
著者Li, Y, Muir, K, Panne, D.
登録日2018-08-03
公開日2018-08-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.631 Å)
主引用文献Structural basis for Scc3-dependent cohesin recruitment to chromatin.
Elife, 7, 2018
8EFM
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BU of 8efm by Molmil
Structure of coral STING receptor from Stylophora pistillata in complex with 2',3'-cGAMP
分子名称: SULFATE ION, Stimulator of interferon genes protein, cGAMP
著者Li, Y, Slavik, K.M, Morehouse, B.R, Mears, K, Kranzusch, P.J.
登録日2022-09-08
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
8GPT
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BU of 8gpt by Molmil
YFV_E_YD6scFv_postfusion
分子名称: Envelope protein, YD6_VH, YD6_VL
著者Li, Y, Wu, L, Qi, J, Yan, J, Gao, G.F.
登録日2022-08-27
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献A neutralizing-protective supersite of human monoclonal antibodies for yellow fever virus.
Innovation (N Y), 3, 2022
8CX2
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BU of 8cx2 by Molmil
Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC dimeric complex in State 2
分子名称: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
著者Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
登録日2022-05-19
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The structural basis for HIV-1 Vif antagonism of human APOBEC3G.
Nature, 615, 2023
8CX0
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Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC monomeric complex
分子名称: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
著者Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
登録日2022-05-19
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献The structural basis for HIV-1 Vif antagonism of human APOBEC3G.
Nature, 615, 2023
8CX1
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BU of 8cx1 by Molmil
Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC dimeric complex in State 1
分子名称: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
著者Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
登録日2022-05-19
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structural basis for HIV-1 Vif antagonism of human APOBEC3G.
Nature, 615, 2023
8F2E
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BU of 8f2e by Molmil
Crystal Structure of the CoV-Y domain of SARS-CoV-2 Nonstructural Protein 3
分子名称: GLYCEROL, Papain-like protease nsp3
著者Li, Y, Shi, W, Hao, B.
登録日2022-11-07
公開日2023-03-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of the CoV-Y domain of SARS-CoV-2 nonstructural protein 3.
Sci Rep, 13, 2023
5Y27
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BU of 5y27 by Molmil
Crystal structure of Se-Met Dpb4-Dpb3
分子名称: DNA polymerase epsilon subunit D, GLYCEROL, Putative transcription factor C16C4.22
著者Li, Y, Gao, F, Su, M, Zhang, F.B, Chen, Y.H.
登録日2017-07-24
公開日2018-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Coordinated regulation of heterochromatin inheritance by Dpb3-Dpb4 complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5C2O
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BU of 5c2o by Molmil
Crystal structure of Streptococcus mutans Deoxycytidylate Deaminase complexed with dTTP
分子名称: MAGNESIUM ION, Putative deoxycytidylate deaminase, THYMIDINE-5'-TRIPHOSPHATE, ...
著者Li, Y.H, Gao, Z.Q, Hou, H.F, Dong, Y.H.
登録日2015-06-16
公開日2016-07-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanism of the allosteric regulation of Streptococcus mutans 2'-deoxycytidylate deaminase.
Acta Crystallogr D Struct Biol, 72, 2016
8WNS
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BU of 8wns by Molmil
Cryo EM map of SLC7A10 in the apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1
著者Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
登録日2023-10-06
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8WNY
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BU of 8wny by Molmil
Cryo EM map of SLC7A10-SLC3A2 complex in the D-serine bound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1, ...
著者Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
登録日2023-10-06
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8WNT
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BU of 8wnt by Molmil
Cryo EM map of SLC7A10 with L-Alanine substrate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALANINE, ...
著者Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
登録日2023-10-06
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8XAB
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BU of 8xab by Molmil
Crystal structure of Ubl1 domain of nonstructural protein 3 of SARS-CoV-2
分子名称: GLYCEROL, Papain-like protease nsp3
著者Li, Y, Ke, Z.
登録日2023-12-03
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献N-terminus of SARS-CoV-2 Nsp3 Interrupts RNA-driven Phase Separation of N Protein by Displacing RNA
To Be Published
8JA5
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BU of 8ja5 by Molmil
Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
分子名称: 14F8 antibody heavy chain, 14F8 antibody light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, Y.H, Huang, X.Y, Xu, J.J, Chen, W.
登録日2023-05-05
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
To Be Published
6U18
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BU of 6u18 by Molmil
Directed evolution of a biosensor selective for the macrolide antibiotic clarithromycin
分子名称: CITRATE ANION, CLARITHROMYCIN, Erythromycin resistance repressor protein
著者Li, Y, Reed, M, Wright, H.T, Cropp, T.A, Williams, G.
登録日2019-08-15
公開日2020-08-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of Genetically Encoded Biosensors for Reporting the Methyltransferase-Dependent Biosynthesis of Semisynthetic Macrolide Antibiotics.
Acs Synth Biol, 2021
8GZ1
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BU of 8gz1 by Molmil
Cryo-EM structure of human NaV1.6/beta1/beta2,apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Sodium channel protein type 8 subunit alpha, ...
著者Li, Y, Jiang, D.
登録日2022-09-24
公開日2023-03-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of human Na V 1.6 channel reveals Na + selectivity and pore blockade by 4,9-anhydro-tetrodotoxin.
Nat Commun, 14, 2023

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