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PDB: 150 件
4TOH
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1.80A resolution structure of Iron Bound BfrB (C89S, K96C) from Pseudomonas aeruginosa
分子名称: Bacterioferritin, FE (II) ION, POTASSIUM ION, ...
著者Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
登録日2014-06-05
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
4TOG
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1.80A resolution structure of BfrB (C89S, K96C) crystal form 2 from Pseudomonas aeruginosa
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Bacterioferritin, POTASSIUM ION, ...
著者Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
登録日2014-06-05
公開日2015-02-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
6ONM
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Crystal Structure of (+)-Limonene Synthase Complexed with 8,9-Difluorolinalyl Diphosphate
分子名称: (+)-limonene synthase, (3R)-8-fluoro-7-(fluoromethyl)-3-methylocta-1,6-dien-3-yl trihydrogen diphosphate, MANGANESE (II) ION
著者Prem Kumar, R, Morehouse, B.R, Yu, Q, Oprian, D.D.
登録日2019-04-22
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Direct Evidence of an Enzyme-Generated LPP Intermediate in (+)-Limonene Synthase Using a Fluorinated GPP Substrate Analog.
Acs Chem.Biol., 14, 2019
5UV0
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Crystal Structure of (+)-Limonene Synthase from Citrus sinensis
分子名称: (+)-limonene synthase
著者Prem Kumar, R, Oprian, D.D.
登録日2017-02-17
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Functional and Structural Characterization of a (+)-Limonene Synthase from Citrus sinensis.
Biochemistry, 56, 2017
5UV1
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Crystal Structure of (+)-Limonene Synthase Complexed with 2-Fluorogeranyl Diphosphate
分子名称: (+)-limonene synthase, (2Z)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, MANGANESE (II) ION
著者Prem Kumar, R, Malik, K, Oprian, D.D.
登録日2017-02-17
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Characterization of Early Michaelis Complexes in the Reaction Catalyzed by (+)-Limonene Synthase from Citrus sinensis Using Fluorinated Substrate Analogues.
Biochemistry, 56, 2017
5UV2
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Crystal Structure of (+)-Limonene Synthase Complexed with 2-Fluoroneryl Diphosphate
分子名称: (+)-limonene synthase, (2E)-2-fluoro-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate, MANGANESE (II) ION
著者Prem Kumar, R, Malik, K, Oprian, D.D.
登録日2017-02-17
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Characterization of Early Michaelis Complexes in the Reaction Catalyzed by (+)-Limonene Synthase from Citrus sinensis Using Fluorinated Substrate Analogues.
Biochemistry, 56, 2017
3KJZ
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Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
分子名称: Peptidyl-tRNA hydrolase
著者Kumar, A, Singh, N, Yadav, R, Prem Kumar, R, Sharma, S, Arora, A, Singh, T.P.
登録日2009-11-04
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of peptidyl-tRNA hydrolase from mycobacterium smegmatis reveals novel features related to enzyme dynamics.
Int J Biochem Mol Biol, 3, 2012
5VYD
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BU of 5vyd by Molmil
Crystal structure of phosphodiesterase domain of RhoPDE fusion protein from the Choanoflagellate Salpingoeca rosetta
分子名称: MAGNESIUM ION, Phosphodiesterase, ZINC ION
著者Prem Kumar, R, Lamarche, L.B, Oprian, D.D.
登録日2017-05-25
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Purification and Characterization of RhoPDE, a Retinylidene/Phosphodiesterase Fusion Protein and Potential Optogenetic Tool from the Choanoflagellate Salpingoeca rosetta.
Biochemistry, 56, 2017
1SQZ
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BU of 1sqz by Molmil
Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between Group II Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
分子名称: Phospholipase A2, SULFATE ION, synthetic peptide
著者Singh, N, Prem Kumar, R, Somvanshi, R.K, Bilgrami, S, Ethayathulla, A.S, Sharma, S, Dey, S, Singh, T.P.
登録日2004-03-22
公開日2004-04-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between GroupII Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
To be Published
6WKI
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BU of 6wki by Molmil
Crystal structure of pentalenene synthase mutant F76H
分子名称: Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKG
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BU of 6wkg by Molmil
Crystal structure of pentalenene synthase mutant F76W
分子名称: Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
1H0Q
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BU of 1h0q by Molmil
NMR solution structure of a fully modified locked nucleic acid (LNA) hybridized to RNA
分子名称: 5-D(*(LKC)P*(TLN)P*(LCG)P*(LCA)P*(TLN)P*(LCA)P* (TLN)P*(LCG)P*(LCC))-3, 5-R(*GP*CP*AP*UP*AP*UP*CP*AP*G)-3
著者Rasmussen, J, Petersen, M, Nielsen, K.E, Kumar, R, Wengel, J, Jacobsen, J.P.
登録日2002-06-27
公開日2003-07-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Studies of Fully Modified Locked Nucleic Acid (Lna) Hybrids: Solution Structure of an Lna:RNA Hybrid and Characterization of an Lna:RNA Hybrid
Bioconjug.Chem., 15, 2004
2YVV
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Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites
分子名称: Hyaluronidase, phage associated, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Mishra, P, Prem Kumar, R, Singh, N, Sharma, S, Kaur, P, Perbandt, M, Betzel, C, Bhakuni, V, Singh, T.P.
登録日2007-04-16
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites
To be Published
2YW0
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Crystal structure of hyluranidase trimer at 2.6 A resolution
分子名称: Hyaluronidase, phage associated
著者Prem Kumar, R, Mishra, P, Singh, N, Perbandt, M, Kaur, P, Sharma, S, Betzel, C, Bhakuni, V, Singh, T.P.
登録日2007-04-18
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Polysaccharide binding sites in hyaluronate lyase--crystal structures of native phage-encoded hyaluronate lyase and its complexes with ascorbic acid and lactose
Febs J., 276, 2009
2YX2
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BU of 2yx2 by Molmil
Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
分子名称: Hyaluronidase, phage associated
著者Mishra, P, Prem Kumar, R, Bhakuni, V, Singh, N, Sharma, S, Kaur, P, Perbandt, M, Betzel, C, Singh, T.P.
登録日2007-04-23
公開日2007-05-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
To be Published
6WKD
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BU of 6wkd by Molmil
Crystal structure of pentalenene synthase complexed with 12,13-difluorofarnesyl diphosphate
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, GLYCEROL, MAGNESIUM ION, ...
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKC
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BU of 6wkc by Molmil
Crystal structure of pentalenene synthase complexed with Mg2+ ions
分子名称: MAGNESIUM ION, Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKF
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Crystal structure of pentalenene synthase mutant F76Y complexed with 12,13-difluorofarnesyl diphosphate
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKE
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BU of 6wke by Molmil
Crystal structure of pentalenene synthase mutant F76Y
分子名称: GLYCEROL, Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKJ
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BU of 6wkj by Molmil
Crystal structure of pentalenene synthase mutant F76H complexed with 12,13-difluorofarnesyl diphosphate
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
6WKH
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BU of 6wkh by Molmil
Crystal structure of pentalenene synthase mutant F76W complexed with 12,13-difluorofarnesyl diphosphate
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Pentalenene synthase
著者Prem Kumar, R, Matos, J.O, Oprian, D.D.
登録日2020-04-16
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanism Underlying Anti-Markovnikov Addition in the Reaction of Pentalenene Synthase.
Biochemistry, 59, 2020
1SQ0
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Crystal Structure of the Complex of the Wild-type Von Willebrand Factor A1 domain and Glycoprotein Ib alpha at 2.6 Angstrom Resolution
分子名称: Platelet glycoprotein Ib alpha chain (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (CD42B-alpha) (CD42B) [Contains: Glycocalicin], Von Willebrand factor (vWF) [Contains: Von Willebrand antigen II]
著者Dumas, J.J, Kumar, R, McDonagh, T, Sullivan, F, Stahl, M.L, Somers, W.S, Mosyak, L.
登録日2004-03-17
公開日2004-04-13
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the wild-type von Willebrand factor A1-glycoprotein Ibalpha complex reveals conformation differences with a complex bearing von Willebrand disease mutations
J.Biol.Chem., 279, 2004
6AO9
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Crystal structure of monomeric guanylyl cyclase domain of RhoGC fusion protein from the aquatic fungus Blastocladiella emersonii
分子名称: Bacterio-rhodopsin/guanylyl cyclase 1 fusion protein
著者Prem Kumar, R, Oprian, D.D.
登録日2017-08-15
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Structure and monomer/dimer equilibrium for the guanylyl cyclase domain of the optogenetics protein RhoGC.
J. Biol. Chem., 292, 2017
6AOA
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Monomeric crystal structure of the E497/C566D double mutant of the guanylyl cyclase domain of the RhoGC fusion protein from the aquatic fungus Blastocladiella emersonii
分子名称: Bacterio-rhodopsin/guanylyl cyclase 1 fusion protein
著者Prem Kumar, R, Oprian, D.D.
登録日2017-08-15
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure and monomer/dimer equilibrium for the guanylyl cyclase domain of the optogenetics protein RhoGC.
J. Biol. Chem., 292, 2017
6AOB
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Crystal structure of non-canonical dimeric guanylyl cyclase domain of RhoGC fusion protein from the aquatic fungus Blastocladiella emersonii
分子名称: Bacterio-rhodopsin/guanylyl cyclase 1 fusion protein, L(+)-TARTARIC ACID, MANGANESE (II) ION
著者Prem Kumar, R, Oprian, D.D.
登録日2017-08-15
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and monomer/dimer equilibrium for the guanylyl cyclase domain of the optogenetics protein RhoGC.
J. Biol. Chem., 292, 2017

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