6AO9
Crystal structure of monomeric guanylyl cyclase domain of RhoGC fusion protein from the aquatic fungus Blastocladiella emersonii
Summary for 6AO9
| Entry DOI | 10.2210/pdb6ao9/pdb |
| Descriptor | Bacterio-rhodopsin/guanylyl cyclase 1 fusion protein (2 entities in total) |
| Functional Keywords | gc, rhogc, enzyme, nucleotide cyclase, class iii nucleotidyl cyclase, lyase |
| Biological source | Blastocladiella emersonii (Aquatic fungus) |
| Total number of polymer chains | 1 |
| Total formula weight | 21502.59 |
| Authors | Prem Kumar, R.,Oprian, D.D. (deposition date: 2017-08-15, release date: 2017-11-22, Last modification date: 2023-10-04) |
| Primary citation | Kumar, R.P.,Morehouse, B.R.,Fofana, J.,Trieu, M.M.,Zhou, D.H.,Lorenz, M.O.,Oprian, D.D. Structure and monomer/dimer equilibrium for the guanylyl cyclase domain of the optogenetics protein RhoGC. J. Biol. Chem., 292:21578-21589, 2017 Cited by PubMed Abstract: RhoGC is a fusion protein from the aquatic fungus , combining a type I rhodopsin domain with a guanylyl cyclase domain. It has generated excitement as an optogenetics tool for the manipulation of cyclic nucleotide signaling pathways. To investigate the regulation of the cyclase activity, we isolated the guanylyl cyclase domain from with (GCwCC) and without (GC) the coiled-coil linker. Both constructs were constitutively active but were monomeric as determined by size-exclusion chromatography and analytical ultracentrifugation, whereas other class III nucleotidyl cyclases are functional dimers. We also observed that crystals of GC have only a monomer in an asymmetric unit. Dimers formed when crystals were grown in the presence of the non-cyclizable substrate analog 2',3'-dideoxyguanosine-5'-triphosphate, MnCl, and tartrate, but their quaternary structure did not conform to the canonical pairing expected for class III enzymes. Moreover, the structure contained a disulfide bond formed with an active-site Cys residue required for activity. We consider it unlikely that the disulfide would form under intracellular reducing conditions, raising the possibility that this unusual dimer might have a biologically relevant role in the regulation of full-length RhoGC. Although we did not observe it with direct methods, a functional dimer was identified as the active state by following the dependence of activity on total enzyme concentration. The low affinity observed for GC monomers is unusual for this enzyme class and suggests that dimer formation may contribute to light activation of the full-length protein. PubMed: 29118188DOI: 10.1074/jbc.M117.812685 PDB entries with the same primary citation |
| Experimental method | X-RAY DIFFRACTION (1.13 Å) |
Structure validation
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