Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 113 results

6DC7
DownloadVisualize
BU of 6dc7 by Molmil
Apo Fab structure of mouse monoclonal antibody 8B2
Descriptor: Fab heavy chain, Fab light chain
Authors:Chukwu, J.E, Kong, X.-P.
Deposit date:2018-05-04
Release date:2019-03-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural characterization of monoclonal antibodies targeting C-terminal Ser404region of phosphorylated tau protein.
MAbs, 11, 2019
6DC9
DownloadVisualize
BU of 6dc9 by Molmil
Fab/epitope complex of human chimeric monoclonal antibody h4E6 targeting a phosphorylated tau epitope.
Descriptor: Fab heavy chain, Fab light chain, GLYCEROL, ...
Authors:Chukwu, J.E, Kong, X.-P.
Deposit date:2018-05-04
Release date:2019-03-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.999 Å)
Cite:Structural characterization of monoclonal antibodies targeting C-terminal Ser404region of phosphorylated tau protein.
MAbs, 11, 2019
6DC8
DownloadVisualize
BU of 6dc8 by Molmil
Fab/epitope complex of mouse monoclonal antibody 8B2 targeting a non-phosphorylated tau epitope.
Descriptor: GLYCEROL, IgG heavy chain, IgG light chain, ...
Authors:Chukwu, J.E, Kong, X.-P.
Deposit date:2018-05-04
Release date:2019-03-20
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural characterization of monoclonal antibodies targeting C-terminal Ser404region of phosphorylated tau protein.
MAbs, 11, 2019
3Q6F
DownloadVisualize
BU of 3q6f by Molmil
Crystal structure of Fab of human mAb 2909 specific for quaternary neutralizing epitope of HIV-1 gp120
Descriptor: DI(HYDROXYETHYL)ETHER, Heavy chain of Fab of human mAb 2909, Light chain of Fab of human mAb 2909
Authors:Spurrier, B, Sampson, J, Totrov, M, Li, H, O'Neal, T, William, C, Robinson, J, Gorny, M.K, Zolla-Pazner, S, Kong, X.P.
Deposit date:2010-12-31
Release date:2011-05-25
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (3.192 Å)
Cite:Structural Analysis of Human and Macaque mAbs 2909 and 2.5B: Implications for the Configuration of the Quaternary Neutralizing Epitope of HIV-1 gp120.
Structure, 19, 2011
3Q6G
DownloadVisualize
BU of 3q6g by Molmil
Crystal structure of Fab of rhesus mAb 2.5B specific for quaternary neutralizing epitope of HIV-1 gp120
Descriptor: Heavy chain of Fab of rhesus mAb 2.5B, Light chain of Fab of rhesus mAb 2.5B
Authors:Spurrier, B, Sampson, J, Totrov, M, Li, H, O'Neal, T, William, C, Robinson, J, Gorny, M.K, Zolla-Pazner, S, Kong, X.P.
Deposit date:2010-12-31
Release date:2011-05-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural Analysis of Human and Macaque mAbs 2909 and 2.5B: Implications for the Configuration of the Quaternary Neutralizing Epitope of HIV-1 gp120.
Structure, 19, 2011
8WWS
DownloadVisualize
BU of 8wws by Molmil
Crystal structure of cis-epoxysuccinate hydrolase from Klebsiella oxytoca with L(+)-tartaric acid
Descriptor: (S)-2-haloacid dehalogenase, 1,2-ETHANEDIOL, CARBONATE ION, ...
Authors:Han, Y, Kong, X.D, Li, J, Xu, J.H.
Deposit date:2023-10-26
Release date:2024-06-12
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Insights of a cis -Epoxysuccinate Hydrolase Facilitate the Development of Robust Biocatalysts for the Production of l-(+)-Tartrate.
Biochemistry, 63, 2024
3QPA
DownloadVisualize
BU of 3qpa by Molmil
Structure of Fusarium Solani Cutinase expressed in Pichia pastoris
Descriptor: Cutinase
Authors:Lu, A, Gosser, Y, Montclare, J.K, Liu, Z, Kong, X.
Deposit date:2011-02-11
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Structure of Fusarium Solani Cutinase expressed in Pichia pastoris
To be Published
3QPC
DownloadVisualize
BU of 3qpc by Molmil
Structure of Fusarium Solani Cutinase expressed in Pichia pastoris, crystallized in the presence of Paraoxon
Descriptor: Cutinase
Authors:Lu, A, Gosser, Y, Montclare, J.K, Liu, Z, Kong, X.
Deposit date:2011-02-11
Release date:2012-02-29
Method:X-RAY DIFFRACTION (0.978 Å)
Cite:Structure of Fusarium Solani Cutinase expressed in Pichia pastoris
To be Published
6DB6
DownloadVisualize
BU of 6db6 by Molmil
Crystal structure of anti-HIV-1 V3 Fab 311-11D in complex with a HIV-1 gp120 V3 peptide from MN strain
Descriptor: HIV-1 gp120 V3 peptide from MN strain, Human monoclonal anti-HIV-1 gp120 V3 antibody 311-11D Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody 311-11D Fab light chain, ...
Authors:Chan, K.-W, Kong, X.-P.
Deposit date:2018-05-02
Release date:2018-07-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Structural Comparison of Human Anti-HIV-1 gp120 V3 Monoclonal Antibodies of the Same Gene Usage Induced by Vaccination and Chronic Infection.
J. Virol., 92, 2018
6DB5
DownloadVisualize
BU of 6db5 by Molmil
Crystal structure of anti-HIV-1 V3 Fab TA6 in complex with a HIV-1 gp120 V3 peptide from NY5 strain
Descriptor: HIV-1 gp120 V3 peptide from NY5 strain, Human monoclonal anti-HIV-1 gp120 V3 antibody TA6 Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody TA6 Fab light chain
Authors:Chan, K.-W, Kong, X.-P.
Deposit date:2018-05-02
Release date:2018-07-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Structural Comparison of Human Anti-HIV-1 gp120 V3 Monoclonal Antibodies of the Same Gene Usage Induced by Vaccination and Chronic Infection.
J. Virol., 92, 2018
4F57
DownloadVisualize
BU of 4f57 by Molmil
Fab structure of a neutralizing antibody L1 from an early subtype A HIV-1 infected patient
Descriptor: GLYCEROL, Heavy chain of Fab of a neutralizing antibody L1, Light chain of Fab of a neutralizing antibody L1
Authors:Pan, R.M, Kong, X.P.
Deposit date:2012-05-12
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Viral Escape from Neutralizing Antibodies in Early Subtype A HIV-1 Infection Drives an Increase in Autologous Neutralization Breadth.
Plos Pathog., 9, 2013
2M30
DownloadVisualize
BU of 2m30 by Molmil
Solution NMR refinement of a metal ion bound protein using quantum mechanical/molecular mechanical and molecular dynamics methods
Descriptor: Repressor protein, ZINC ION
Authors:Chakravorty, D.K, Wang, B.I, Lee, C.I, Guerra, A.J, Giedroc, D.P, Merz Jr, K.M, Arunkumar, A.I, Pennella, M, Kong, X.
Deposit date:2013-01-04
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR refinement of a metal ion bound protein using metal ion inclusive restrained molecular dynamics methods.
J.Biomol.Nmr, 56, 2013
4M1D
DownloadVisualize
BU of 4m1d by Molmil
Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 cyclic peptide MN
Descriptor: Cyclic V3 Arch Peptide, Fab mAb 447-52D Heavy Chain, Fab mAb 447-52D Light Chain, ...
Authors:Killikelly, A, Kong, X.P.
Deposit date:2013-08-02
Release date:2013-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thermodynamic Signatures of the Antigen Binding Site of mAb 447-52D Targeting the Third Variable Region of HIV-1 gp120.
Biochemistry, 52, 2013
6DCA
DownloadVisualize
BU of 6dca by Molmil
Fab/epitope complex of mouse monoclonal antibody 6B2 targeting a non-phosphorylated tau epitope.
Descriptor: Fab heavy chain, Fab light chain, Microtubule-associated protein tau, ...
Authors:Chukwu, J.E, Kong, X.-P.
Deposit date:2018-05-04
Release date:2019-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Structural characterization of monoclonal antibodies targeting C-terminal Ser404region of phosphorylated tau protein.
MAbs, 11, 2019
3RQW
DownloadVisualize
BU of 3rqw by Molmil
Crystal structure of acetylcholine bound to a prokaryotic pentameric ligand-gated ion channel, ELIC
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYLCHOLINE, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, ...
Authors:Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
Deposit date:2011-04-28
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
6DB7
DownloadVisualize
BU of 6db7 by Molmil
Crystal structure of anti-HIV-1 V3 Fab 1334 in complex with a HIV-1 gp120 V3 peptide from MN strain
Descriptor: GLYCEROL, HIV-1 gp120 V3 peptide from MN strain, Human monoclonal anti-HIV-1 gp120 V3 antibody 1334 Fab heavy chain, ...
Authors:Chan, K.-W, Kong, X.-P.
Deposit date:2018-05-02
Release date:2018-07-11
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.213 Å)
Cite:Structural Comparison of Human Anti-HIV-1 gp120 V3 Monoclonal Antibodies of the Same Gene Usage Induced by Vaccination and Chronic Infection.
J. Virol., 92, 2018
3RQU
DownloadVisualize
BU of 3rqu by Molmil
Crystal structure of a prokaryotic pentameric ligand-gated ion channel, ELIC
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, GLYCEROL
Authors:Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
Deposit date:2011-04-28
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.089 Å)
Cite:Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
5UBY
DownloadVisualize
BU of 5uby by Molmil
Fab structure of anti-HIV-1 gp120 mAb 1A8
Descriptor: Heavy chain of Fab fragment of anti-HIV1 gp120 mAb 1A8, Light chain of Fab fragment of anti-HIV1 gp120 mAb 1A8
Authors:Pan, R, Kong, X.-P.
Deposit date:2016-12-21
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:High Antibody Diversity and Low Inter-clonal Competition Favor Production of Functional Neutralizing Antibodies
To be Published
4F58
DownloadVisualize
BU of 4f58 by Molmil
Fab structure of a neutralizing antibody L3 from an early subtype A HIV-1 infected patient
Descriptor: Heavy chain of Fab of a neutralizing antibody L3, Light chain of Fab of a neutralizing antibody L3, SULFATE ION
Authors:Pan, R.M, Kong, X.P.
Deposit date:2012-05-12
Release date:2013-03-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.488 Å)
Cite:Viral Escape from Neutralizing Antibodies in Early Subtype A HIV-1 Infection Drives an Increase in Autologous Neutralization Breadth.
Plos Pathog., 9, 2013
5UBZ
DownloadVisualize
BU of 5ubz by Molmil
Fab structure of HIV gp120 specific mAb 1E12
Descriptor: Anti-HIV1 gp120 mAb 1E12 Fab heavy chain, Anti-HIV1 gp120 mAb 1E12 Fab light chain
Authors:Pan, R, Kong, X.-P.
Deposit date:2016-12-21
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:High Antibody Diversity and Low Inter-clonal Competition Favor Production of Functional Neutralizing Antibodies
To be published
1PRO
DownloadVisualize
BU of 1pro by Molmil
HIV-1 PROTEASE DIMER COMPLEXED WITH A-98881
Descriptor: (5R,6R)-2,4-BIS-(4-HYDROXY-3-METHOXYBENZYL)-1,5-DIBENZYL-3-OXO-6-HYDROXY-1,2,4-TRIAZACYCLOHEPTANE, HIV-1 PROTEASE
Authors:Park, C.H, Kong, X.P, Dealwis, C.G.
Deposit date:1995-07-18
Release date:1996-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel, picomolar inhibitor of human immunodeficiency virus type 1 protease.
J.Med.Chem., 39, 1996
5YB5
DownloadVisualize
BU of 5yb5 by Molmil
The complex crystal structure of VrEH2 mutant M263N with SNO
Descriptor: (S)-PARA-NITROSTYRENE OXIDE, Epoxide hydrolase
Authors:Li, F.L, Chen, F.F, Chen, Q, Kong, X.D, Yu, H.L, Xu, J.H.
Deposit date:2017-09-03
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Regioselectivity Engineering of Epoxide Hydrolase: Near-Perfect Enantioconvergence through a Single Site Mutation
Acs Catalysis, 8, 2018
4OAW
DownloadVisualize
BU of 4oaw by Molmil
Fab structure of anti-HIV gp120 V2 mAb 2158
Descriptor: GLYCEROL, Heavy chain of Fab fragment of anti-HIV1 gp120 V2 mAb 2158, Light chain of Fab fragment of anti-HIV1 gp120 V2 mAb 2158, ...
Authors:Spurrier, B.R, Kong, X.P.
Deposit date:2014-01-06
Release date:2014-03-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Functional Implications of the Binding Mode of a Human Conformation-Dependent V2 Monoclonal Antibody against HIV.
J.Virol., 88, 2014
4F8H
DownloadVisualize
BU of 4f8h by Molmil
X-ray Structure of the Anesthetic Ketamine Bound to the GLIC Pentameric Ligand-gated Ion Channel
Descriptor: (R)-ketamine, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Proton-gated ion channel, ...
Authors:Pan, J.J, Chen, Q, Willenbring, D, Kong, X.P, Cohen, A, Xu, Y, Tang, P.
Deposit date:2012-05-17
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structure of the Pentameric Ligand-Gated Ion Channel GLIC Bound with Anesthetic Ketamine.
Structure, 20, 2012
8HO1
DownloadVisualize
BU of 8ho1 by Molmil
Crystal structure of cytochrome P450 NasF5053 mutant F387G
Descriptor: CALCIUM ION, Cytochrome P450-F5053, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ma, B.D, Tian, W, Qu, X, Kong, X.D.
Deposit date:2022-12-09
Release date:2023-04-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineering the Substrate Specificity of a P450 Dimerase Enables the Collective Biosynthesis of Heterodimeric Tryptophan-Containing Diketopiperazines.
Angew.Chem.Int.Ed.Engl., 62, 2023

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon