Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 257 results

8F8E
DownloadVisualize
BU of 8f8e by Molmil
Crystal structure of the WDR domain of human DCAF1 in complex with OICR-8268 compound
Descriptor: (3P)-N-[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]-3-(4-chloro-2-fluorophenyl)-1H-pyrazole-4-carboxamide, CITRIC ACID, DDB1- and CUL4-associated factor 1
Authors:Kimani, S, Li, A, Dong, A, Li, Y, Hutchinson, A, Seitova, A, Wilson, B, Al-Awar, R, Vedadi, M, Brown, P, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2022-11-21
Release date:2023-03-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the WDR domain of human DCAF1 in complex with OICR-8268 compound
To be published
5AXM
DownloadVisualize
BU of 5axm by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
Descriptor: MAGNESIUM ION, RNA (75-MER), tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXN
DownloadVisualize
BU of 5axn by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RNA (75-MER), ...
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXK
DownloadVisualize
BU of 5axk by Molmil
Crystal structure of Thg1 like protein (TLP)
Descriptor: GLYCEROL, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXL
DownloadVisualize
BU of 5axl by Molmil
Crystal structure of Thg1 like protein (TLP) with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.998 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
4O9A
DownloadVisualize
BU of 4o9a by Molmil
Crystal structure of Beta-ketothiolase (PhaA) from Ralstonia eutropha H16
Descriptor: Acetyl-CoA acetyltransferase
Authors:Kim, E.J, Kim, J, Kim, S, Kim, K.J.
Deposit date:2014-01-02
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystal structure and biochemical characterization of PhaA from Ralstonia eutropha, a polyhydroxyalkanoate-producing bacterium.
Biochem.Biophys.Res.Commun., 452, 2014
8OSB
DownloadVisualize
BU of 8osb by Molmil
TWIST1-TCF4-ALX4 complex on specific DNA
Descriptor: DNA (25-MER), Homeobox protein aristaless-like 4, Transcription factor 4, ...
Authors:Morgunova, E, Kim, S, Popov, A, Wysocka, J, Taipale, J.
Deposit date:2023-04-18
Release date:2024-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:DNA-guided transcription factor cooperativity shapes face and limb mesenchyme.
Cell, 187, 2024
6LAI
DownloadVisualize
BU of 6lai by Molmil
The structural basis of the beta-carbonic anhydrase CafD (E54A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
9IKC
DownloadVisualize
BU of 9ikc by Molmil
Orf virus scaffolding protein Orfv075
Descriptor: 62 kDa protein
Authors:Hyun, J, Kim, S, Ko, S, Kim, M, Jang, Y.
Deposit date:2024-06-27
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (1.9 Å)
Cite:Cryo-EM structure of orf virus scaffolding protein orfv075.
Biochem.Biophys.Res.Commun., 728, 2024
6K69
DownloadVisualize
BU of 6k69 by Molmil
Application of anti-helix antibodies in protein structure determination (9213-3LRH)
Descriptor: 3LRH intrabody, Engineered T4 lysozyme
Authors:Lee, J.O, Jin, M.S, Kim, J.W, Kim, S, Lee, H, Cho, G.Y.
Deposit date:2019-06-01
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Application of antihelix antibodies in protein structure determination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6K68
DownloadVisualize
BU of 6k68 by Molmil
Application of anti-helix antibodies in protein structure determination (8420-3MNZ)
Descriptor: 3MNZ Variable heavy chain, 3MNZ Variable light chain, Protein A
Authors:Lee, J.O, Jin, M.S, Kim, J.W, Kim, S, Lee, H, Cho, G.Y.
Deposit date:2019-06-01
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Application of antihelix antibodies in protein structure determination.
Proc.Natl.Acad.Sci.USA, 116, 2019
7CQ0
DownloadVisualize
BU of 7cq0 by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
Descriptor: Mature Streptoavidin-C1
Authors:Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
Deposit date:2020-08-08
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
7CPZ
DownloadVisualize
BU of 7cpz by Molmil
Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis
Descriptor: BIOTIN, Mature Streptoavidin-C1
Authors:Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y.
Deposit date:2020-08-08
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites.
Iucrj, 8, 2021
8YR4
DownloadVisualize
BU of 8yr4 by Molmil
Cryo-EM structure of the human ABCB6 in complex with Cd(II):Phytochelatin 2
Descriptor: ATP-binding cassette sub-family B member 6, CADMIUM ION, GAMMA-D-GLUTAMIC ACID, ...
Authors:Choi, S.H, Lee, S.S, Lee, H.Y, Kim, S, Kim, J.W, Jin, M.S.
Deposit date:2024-03-20
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of cadmium-bound human ABCB6.
Commun Biol, 7, 2024
8YR3
DownloadVisualize
BU of 8yr3 by Molmil
Cryo-EM structure of the human ABCB6 in complex with Cd(II):GSH
Descriptor: ATP-binding cassette sub-family B member 6, CADMIUM ION, GLUTATHIONE
Authors:Choi, S.H, Lee, S.S, Lee, H.Y, Kim, S, Kim, J.W, Jin, M.S.
Deposit date:2024-03-20
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of cadmium-bound human ABCB6.
Commun Biol, 7, 2024
7C11
DownloadVisualize
BU of 7c11 by Molmil
Formate--tetrahydrofolate ligase from Methylobacterium extorquens CM4 strain
Descriptor: ACETATE ION, CITRATE ANION, Formate-tetrahydrofolate ligase, ...
Authors:Kim, K.-J, Kim, S, Seo, H, Lee, S.
Deposit date:2020-05-02
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:Biochemical properties and crystal structure of formate-tetrahydrofolate ligase from Methylobacterium extorquens CM4.
Biochem.Biophys.Res.Commun., 528, 2020
2UZ8
DownloadVisualize
BU of 2uz8 by Molmil
The crystal structure of p18, human translation elongation factor 1 epsilon 1
Descriptor: EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1, GLYCEROL
Authors:Kang, B.S, Kim, K.J, Kim, M.H, Oh, Y.S, Kim, S.
Deposit date:2007-04-26
Release date:2008-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Determination of Three-Dimensional Structure and Residues of the Novel Tumor Suppressor Aimp3/P18 Required for the Interaction with Atm.
J.Biol.Chem., 283, 2008
5JJH
DownloadVisualize
BU of 5jjh by Molmil
Crystal structure of amylomaltase from Corynebacterium glutamicum
Descriptor: 4-alpha-glucanotransferase, GLYCEROL, SULFATE ION
Authors:Joo, S, Kim, S, Kim, K.-J.
Deposit date:2016-04-24
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of amylomaltase from Corynebacterium glutamicum
to be published
6LAC
DownloadVisualize
BU of 6lac by Molmil
The structural basis of the beta-carbonic anhydrase CafD (C39A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jiin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
6J10
DownloadVisualize
BU of 6j10 by Molmil
Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
Descriptor: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
Authors:Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
Deposit date:2018-12-27
Release date:2019-04-17
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
5ZNX
DownloadVisualize
BU of 5znx by Molmil
Crystal structure of CM14-treated HlyU from Vibrio vulnificus
Descriptor: Transcriptional activator
Authors:Park, N, Kim, S, Jo, I, Ahn, J, Hong, S, Jeong, S, Baek, Y.
Deposit date:2018-04-11
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.114 Å)
Cite:Small-molecule inhibitor of HlyU attenuates virulence of Vibrio species.
Sci Rep, 9, 2019
5B68
DownloadVisualize
BU of 5b68 by Molmil
Crystal structure of apo amylomaltase from Corynebacterium glutamicum
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-alpha-glucanotransferase, GLYCEROL, ...
Authors:Joo, S, Kim, S, Kim, K.-J.
Deposit date:2016-05-25
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Amylomaltase from Corynebacterium glutamicum.
J.Agric.Food Chem., 64, 2016
7COJ
DownloadVisualize
BU of 7coj by Molmil
Crystal structure of the b-carbonic anhydrase CafA of the fungal pathogen Aspergillus fumigatus
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, Carbonic anhydrase, ZINC ION
Authors:Jin, M.S, Kim, S, Yeon, J, Sung, J.
Deposit date:2020-08-04
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of beta-Carbonic Anhydrase CafA from the Fungal Pathogen Aspergillus fumigatus .
Mol.Cells, 43, 2020
2V0V
DownloadVisualize
BU of 2v0v by Molmil
Crystal Structure of Rev-Erb beta
Descriptor: ORPHAN NUCLEAR RECEPTOR NR1D2
Authors:Woo, E.-J, Jeong, D.G, Lim, M.-Y, Jun Kim, S, Eon Ryu, S.
Deposit date:2007-05-19
Release date:2007-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insight Into the Constitutive Repression Function of the Nuclear Receptor Rev-Erbbeta
J.Mol.Biol., 373, 2007
4J15
DownloadVisualize
BU of 4j15 by Molmil
Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Descriptor: Aspartate--tRNA ligase, cytoplasmic, GLYCEROL
Authors:Kim, K.R, Park, S.H, Kim, H.S, Kim, B.-G, Kim, D.G, Rhee, K.H, Park, M.S, Kim, H.-J, Kim, S, Han, B.W.
Deposit date:2013-02-01
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Proteins, 81, 2013

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon