Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 54 results

7S6B
DownloadVisualize
BU of 7s6b by Molmil
Crystal structure of modular polyketide synthase apo-Lsd14 from the Lasalocid biosynthesis pathway, trapped in the transacylation step
Descriptor: Polyketide synthase
Authors:Bagde, S.R, Mathews, I.I, Kim, C.-Y.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Modular polyketide synthase contains two reaction chambers that operate asynchronously.
Science, 374, 2021
7S6C
DownloadVisualize
BU of 7s6c by Molmil
CryoEM structure of modular PKS holo-Lsd14 stalled at the condensation step and bound to antibody fragment 1B2, composite structure
Descriptor: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 4'-PHOSPHOPANTETHEINE, 6-deoxyerythronolide-B synthase EryA2, ...
Authors:Bagde, S.R, Kim, C.-Y, Fromme, J.C.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Modular polyketide synthase contains two reaction chambers that operate asynchronously.
Science, 374, 2021
7S6D
DownloadVisualize
BU of 7s6d by Molmil
CryoEM structure of modular PKS holo-Lsd14 bound to antibody fragment 1B2, composite structure
Descriptor: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4, ...
Authors:Bagde, S.R, Kim, C.-Y, Fromme, J.C.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Modular polyketide synthase contains two reaction chambers that operate asynchronously.
Science, 374, 2021
5KSV
DownloadVisualize
BU of 5ksv by Molmil
Crystal structure of HLA-DQ2.5-CLIP2
Descriptor: HLA class II histocompatibility antigen gamma chain, MHC class II HLA-DQ-alpha chain, MHC class II HLA-DQ-beta-1
Authors:Nguyen, T.B, Jayaraman, P, Bergseng, E, Madhusudhan, M.S, Kim, C.-Y, Sollid, L.M.
Deposit date:2016-07-10
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Unraveling the structural basis for the unusually rich association of human leukocyte antigen DQ2.5 with class-II-associated invariant chain peptides.
J. Biol. Chem., 292, 2017
5KSU
DownloadVisualize
BU of 5ksu by Molmil
Crystal structure of HLA-DQ2.5-CLIP1 at 2.73 resolution
Descriptor: HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, DQ alpha 1 chain, ...
Authors:Nguyen, T.-B, Jayaraman, P, Bergseng, E, Madhusudhan, M.S, Kim, C.-Y, Sollid, L.M.
Deposit date:2016-07-10
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Unraveling the structural basis for the unusually rich association of human leukocyte antigen DQ2.5 with class-II-associated invariant chain peptides.
J. Biol. Chem., 292, 2017
7SH1
DownloadVisualize
BU of 7sh1 by Molmil
Class II UvrA protein - Ecm16
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Excinuclease ABC subunit UvrA, ...
Authors:Grade, P, Erlandson, A, Ullah, A, Mathews, I.I, Chen, X, Kim, C.-Y, Mera, P.E.
Deposit date:2021-10-07
Release date:2022-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural and functional analyses of the echinomycin resistance conferring protein Ecm16 from Streptomyces lasalocidi.
Sci Rep, 13, 2023
4HC6
DownloadVisualize
BU of 4hc6 by Molmil
Mycobacterium tuberculosis Rv2523cE77A x-ray structure solved with 1.8 angstrom resolution
Descriptor: BROMIDE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Kim, H.-B, Han, G.-W, Hung, L.-W, Terwilliger, C.T, Kim, C.-Y, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2012-09-28
Release date:2012-11-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mycobacterium tuberculosis Rv2523cE77A x-ray structure solved with 1.8 angstrom resolution
To be Published
4JJT
DownloadVisualize
BU of 4jjt by Molmil
The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
Descriptor: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
Authors:Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-03-08
Release date:2013-03-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
6O7F
DownloadVisualize
BU of 6o7f by Molmil
Mycobacterium tuberculosis L-alanine dehydrogenase x-ray structure in complex with N6-isobutyl adenosine
Descriptor: Alanine dehydrogenase, N-(2-methylpropanoyl)adenosine
Authors:Kim, H.-B, Hung, L.-W, Terwilliger, T.C, Kim, C.-Y, Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2019-03-07
Release date:2020-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Mycobacterium tuberculosis L-alanine dehydrogenase x-ray structure in complex with N6-isobutyl adenosine
To Be Published
3LP6
DownloadVisualize
BU of 3lp6 by Molmil
Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A resolution
Descriptor: FORMIC ACID, GLYCEROL, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Kim, H, Yu, M, Hung, L.-W, Terwilliger, T.C, Kim, C.-Y, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
Deposit date:2010-02-04
Release date:2010-06-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A Resolution
To be Published
4LMP
DownloadVisualize
BU of 4lmp by Molmil
Mycobacterium tuberculosis L-alanine dehydrogenase x-ray structure in complex with N6-methyl adenosine
Descriptor: Alanine dehydrogenase, GLYCEROL, N-methyladenosine, ...
Authors:Kim, H.-B, Hung, L.-W, Goulding, C.W, Terwilliger, T.C, Kim, C.-Y, Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-07-10
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Drug target analysis by dye-ligand affinity chromatography
To be Published
2A2J
DownloadVisualize
BU of 2a2j by Molmil
Crystal structure of a putative pyridoxine 5'-phosphate oxidase (Rv2607) from Mycobacterium tuberculosis
Descriptor: Pyridoxamine 5'-phosphate oxidase
Authors:Pedelacq, J.-D, Rho, B.-S, Kim, C.-Y, Waldo, G.S, Lekin, T.P, Segelke, B.W, Rupp, B, Hung, L.-W, Kim, S.-I, Terwilliger, T.C, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2005-06-22
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a putative pyridoxine 5'-phosphate oxidase (Rv2607) from Mycobacterium tuberculosis.
Proteins, 62, 2005
1SIX
DownloadVisualize
BU of 1six by Molmil
Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.-S, Kim, M, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-01
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
1SM8
DownloadVisualize
BU of 1sm8 by Molmil
M. tuberculosis dUTPase complexed with chromium and dUTP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHROMIUM ION, DEOXYURIDINE-5'-TRIPHOSPHATE, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-08
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
1SNF
DownloadVisualize
BU of 1snf by Molmil
MYCOBACTERIUM TUBERCULOSIS DUTPASE COMPLEXED WITH MAGNESIUM AND DEOXYURIDINE 5'-MONOPHOSPHATE
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-10
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
1SJN
DownloadVisualize
BU of 1sjn by Molmil
Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-04
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
1SLH
DownloadVisualize
BU of 1slh by Molmil
Mycobacterium tuberculosis dUTPase complexed with magnesium and dUDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-05
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
1SMC
DownloadVisualize
BU of 1smc by Molmil
Mycobacterium tuberculosis dUTPase complexed with dUTP in the absence of metal ion.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYURIDINE-5'-TRIPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ...
Authors:Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.S, Kim, M.-Y, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-03-09
Release date:2004-03-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.
J.Mol.Biol., 341, 2004
2G2D
DownloadVisualize
BU of 2g2d by Molmil
Crystal structure of a putative pduO-type ATP:cobalamin adenosyltransferase from Mycobacterium tuberculosis
Descriptor: ATP:cobalamin adenosyltransferase
Authors:Moon, J.H, Kaviratne, A, Yu, M, Bursey, E.H, Hung, L.-W, Lekin, T.P, Segelke, B.W, Terwilliger, T.C, Kim, C.-Y, TB Structural Genomics Consortium (TBSGC)
Deposit date:2006-02-15
Release date:2006-03-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative pduO-type ATP:cobalamin adenosyltransferase from Mycobacterium tuberculosis.
To be Published
4RZM
DownloadVisualize
BU of 4rzm by Molmil
Crystal structure of the Lsd19-lasalocid A complex
Descriptor: CHLORIDE ION, Epoxide hydrolase LasB, FORMIC ACID, ...
Authors:Mathews, I.I, Hotta, K, Chen, X, Kim, C.-Y.
Deposit date:2014-12-22
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis.
J.Am.Chem.Soc., 137, 2015
3B4W
DownloadVisualize
BU of 3b4w by Molmil
Crystal structure of Mycobacterium tuberculosis aldehyde dehydrogenase complexed with NAD+
Descriptor: Aldehyde dehydrogenase, ETHANOL, GLYCEROL, ...
Authors:Moon, J.H, Lyon, A.E, Yu, M, Hung, L.-W, Terwilliger, T, Kim, C.-Y, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
Deposit date:2007-10-24
Release date:2007-11-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of aldehyde dehydrogenase from Mycobacterium tuberculosis complexed with NAD+.
To Be Published
4NEC
DownloadVisualize
BU of 4nec by Molmil
Conversion of a Disulfide Bond into a Thioacetal Group during Echinomycin Biosynthesis
Descriptor: 2-CARBOXYQUINOXALINE, ACETATE ION, Echinomycin, ...
Authors:Hotta, K, Keegan, R.M, Ranganathan, S, Fang, M, Bibby, J, Winn, M.D, Sato, M, Lian, M, Watanabe, K, Rigden, D.J, Kim, C.-Y.
Deposit date:2013-10-29
Release date:2014-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conversion of a disulfide bond into a thioacetal group during echinomycin biosynthesis.
Angew.Chem.Int.Ed.Engl., 53, 2014
3RGA
DownloadVisualize
BU of 3rga by Molmil
Crystal structure of epoxide hydrolase for polyether lasalocid A biosynthesis
Descriptor: (4R,5S)-3-[(2R)-2-{(2S,2'R,4S,5S,5'R)-2,5'-diethyl-5'-[(1S)-1-hydroxyethyl]-4-methyloctahydro-2,2'-bifuran-5-yl}butanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one, (4R,5S)-3-[(2R,3S,4S)-2-ethyl-5-[(3R)-2-ethyl-3-[2-[(2R,3R)-2-ethyl-3-methyl-oxiran-2-yl]ethyl]oxiran-2-yl]-3-hydroxy-4-methyl-pentanoyl]-4-methyl-5-phenyl-1,3-oxazolidin-2-one, ACETATE ION, ...
Authors:Hotta, K, Mathews, I.I, Chen, X, Kim, C.-Y.
Deposit date:2011-04-08
Release date:2012-03-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Enzymatic catalysis of anti-Baldwin ring closure in polyether biosynthesis
Nature, 483, 2012
2A7Y
DownloadVisualize
BU of 2a7y by Molmil
Solution Structure of the Conserved Hypothetical Protein Rv2302 from the Bacterium Mycobacterium tuberculosis
Descriptor: Hypothetical protein Rv2302/MT2359
Authors:Buchko, G.W, Kim, C.-Y, Terwilliger, T.C, Kennedy, M.A, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-07-06
Release date:2005-08-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the conserved hypothetical protein Rv2302 from Mycobacterium tuberculosis.
J.Bacteriol., 188, 2006
1IF8
DownloadVisualize
BU of 1if8 by Molmil
Carbonic Anhydrase II Complexed With (S)-N-(3-Indol-1-yl-2-methyl-propyl)-4-sulfamoyl-benzamide
Descriptor: (S)-N-(3-INDOL-1-YL-2-METHYL-PROPYL)-4-SULFAMOYL-BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Grzybowski, B.A, Ishchenko, A.V, Kim, C.-Y, Topalov, G, Chapman, R, Christianson, D.W, Whitesides, G.M, Shakhnovich, E.I.
Deposit date:2001-04-12
Release date:2001-05-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Combinatorial computational method gives new picomolar ligands for a known enzyme.
Proc.Natl.Acad.Sci.USA, 99, 2002

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon