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PDB: 13 results

8H78
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BU of 8h78 by Molmil
Crystal structure of human MMP-2 catalytic domain in complex with inhibitor
Descriptor: (2~{R})-2-[[4-[(4-aminocarbonylphenyl)carbonylamino]phenyl]sulfonylamino]-5-[(2~{S},4~{S})-4-azanyl-2-[[(2~{S})-1-[[(2~{S})-1-[(5-azanyl-5-oxidanylidene-pentyl)amino]-5-oxidanyl-1,5-bis(oxidanylidene)pentan-2-yl]-methyl-amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamoyl]pyrrolidin-1-yl]-5-oxidanylidene-pentanoic acid, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Takeuchi, T, Mima, M.
Deposit date:2022-10-19
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of TP0597850: A Selective, Chemically Stable, and Slow Tight-Binding Matrix Metalloproteinase-2 Inhibitor with a Phenylbenzamide-Pentapeptide Hybrid Scaffold.
J.Med.Chem., 66, 2023
7XJO
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BU of 7xjo by Molmil
Crystal structure of human MMP-2 catalytic domain in complex with inhibitor
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kamitani, M, Mima, M, Takeuchi, T.
Deposit date:2022-04-18
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Aryloxyphenyl-Heptapeptide Hybrids as Potent and Selective Matrix Metalloproteinase-2 Inhibitors for the Treatment of Idiopathic Pulmonary Fibrosis.
J.Med.Chem., 65, 2022
7XGJ
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BU of 7xgj by Molmil
Crystal structure of human MMP-2 catalytic domain in complex with inhibitor
Descriptor: CALCIUM ION, GZS-ASN-ASP-ALA-LEU-IML-EOE-NH2, Matrix metalloproteinase-2, ...
Authors:Kamitani, M, Mima, M, Takeuchi, T.
Deposit date:2022-04-05
Release date:2022-06-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of Aryloxyphenyl-Heptapeptide Hybrids as Potent and Selective Matrix Metalloproteinase-2 Inhibitors for the Treatment of Idiopathic Pulmonary Fibrosis.
J.Med.Chem., 65, 2022
7WXX
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BU of 7wxx by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, Matrilysin, Peptide Inhibitor, ...
Authors:Kamitani, M, Oka, Y, Tabuse, H.
Deposit date:2022-02-15
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of Highly Potent and Selective Matrix Metalloproteinase-7 Inhibitors by Hybridizing the S1' Subsite Binder with Short Peptides.
J.Med.Chem., 65, 2022
8K5Y
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BU of 8k5y by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (3-azanyl-4-fluoranyl-5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)-[6-(2-oxidanylpropan-2-yl)-1H-indol-2-yl]methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5X
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BU of 8k5x by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: (6-cyclopropyl-1~{H}-indol-2-yl)-(5,7,8,9-tetrahydropyrido[4,3-c]azepin-6-yl)methanone, CALCIUM ION, CHLORIDE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5W
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BU of 8k5w by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 2-[[5-fluoranyl-7-(methylamino)-1H-indol-2-yl]carbonyl]-N-(2-pyrrol-1-ylethyl)-3,4-dihydro-1H-isoquinoline-7-carboxamide, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
8K5V
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BU of 8k5v by Molmil
Crystal structure of human proMMP-9 catalytic domain in complex with inhibitor
Descriptor: 6,7-dihydro-4H-[1,3]oxazolo[4,5-c]pyridin-5-yl-(7-ethyl-2H-indazol-3-yl)methanone, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Kamitani, M, Mima, M, Nishikawa-Shimono, R.
Deposit date:2023-07-24
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of novel indole derivatives as potent and selective inhibitors of proMMP-9 activation.
Bioorg.Med.Chem.Lett., 97, 2023
7C7O
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BU of 7c7o by Molmil
Crystal structure of E.coli DNA gyrase B in complex with 6-fluoro-8-(methylamino)-2-oxo-1,2-dihydroquinoline derivative
Descriptor: 4-[[4-(3-azanylpropylamino)-6-fluoranyl-8-(methylamino)-2-oxidanylidene-1~{H}-quinolin-3-yl]carbonylamino]benzoic acid, DNA gyrase subunit B
Authors:Kamitani, M, Mima, M, Takeuchi, T, Ushiyama, F.
Deposit date:2020-05-26
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lead optimization of 8-(methylamino)-2-oxo-1,2-dihydroquinolines as bacterial type II topoisomerase inhibitors.
Bioorg.Med.Chem., 28, 2020
8JUF
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BU of 8juf by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, Matrilysin, Peptide Inhibitor, ...
Authors:Kamitani, M, Abe-Sato, K, Oka, Y.
Deposit date:2023-06-26
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structure-Based Optimization and Biological Evaluation of Potent and Selective MMP-7 Inhibitors for Kidney Fibrosis.
J.Med.Chem., 66, 2023
8JUD
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BU of 8jud by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, Matrilysin, Peptide Inhibitor, ...
Authors:Kamitani, M, Abe-Sato, K, Oka, Y.
Deposit date:2023-06-26
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Based Optimization and Biological Evaluation of Potent and Selective MMP-7 Inhibitors for Kidney Fibrosis.
J.Med.Chem., 66, 2023
8JUG
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BU of 8jug by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, Matrilysin, Peptide Inhibitor, ...
Authors:Kamitani, M, Abe-Sato, K, Oka, Y.
Deposit date:2023-06-26
Release date:2023-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-Based Optimization and Biological Evaluation of Potent and Selective MMP-7 Inhibitors for Kidney Fibrosis.
J.Med.Chem., 66, 2023
8K4Z
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BU of 8k4z by Molmil
Crystal structure of human MMP-7 in complex with inhibitor
Descriptor: CALCIUM ION, CHLORIDE ION, IODIDE ION, ...
Authors:Kamitani, M, Mima, M, Oka, Y.
Deposit date:2023-07-20
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of TP0628103: A Selective MMP-7 Inhibitor Based on the Mitigation of OATP Substrate Recognition through Isoelectric Point Shift Strategy
To Be Published

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