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PDB: 1057 results

4X98
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Immunoglobulin Fc heterodimer variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Seok, S.H, Choi, H.J, Kim, Y.J, Seo, M.D, Kim, Y.S.
Deposit date:2014-12-11
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Crystal structures of immunoglobulin Fc heterodimers reveal the molecular basis for heterodimer formation.
Mol.Immunol., 65, 2015
4X99
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Immunoglobulin Fc heterodimers variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region
Authors:Seok, S.H, Choi, H.J, Kim, Y.J, Seo, M.D, Kim, Y.S.
Deposit date:2014-12-11
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal structures of immunoglobulin Fc heterodimers reveal the molecular basis for heterodimer formation.
Mol.Immunol., 65, 2015
4V46
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Crystal structure of the BAFF-BAFF-R complex
Descriptor: MAGNESIUM ION, Tumor necrosis factor ligand superfamily member 13B, Tumor necrosis factor receptor superfamily member 13C
Authors:Kim, H.M, Yu, K.S, Lee, M.E, Shin, D.R, Kim, Y.S, Paik, S.G, Yoo, O.J, Lee, H, Lee, J.-O.
Deposit date:2003-03-23
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the BAFF-BAFF-R complex and its implications for receptor activation
NAT.STRUCT.BIOL., 10, 2003
1CEK
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THREE-DIMENSIONAL STRUCTURE OF THE MEMBRANE-EMBEDDED M2 CHANNEL-LINING SEGMENT FROM THE NICOTINIC ACETYLCHOLINE RECEPTOR BY SOLID-STATE NMR SPECTROSCOPY
Descriptor: PROTEIN (ACETYLCHOLINE RECEPTOR M2)
Authors:Marassi, F.M, Gesell, J.J, Kim, Y, Valente, A.P, Oblatt-Montal, M, Montal, M, Opella, S.J.
Deposit date:1999-03-09
Release date:1999-03-11
Last modified:2023-12-27
Method:SOLID-STATE NMR
Cite:Structures of the M2 channel-lining segments from nicotinic acetylcholine and NMDA receptors by NMR spectroscopy.
Nat.Struct.Biol., 6, 1999
1DBO
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CRYSTAL STRUCTURE OF CHONDROITINASE B
Descriptor: 4-deoxy-alpha-D-glucopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, 4-deoxy-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CHONDROITINASE B
Authors:Huang, W, Matte, A, Li, Y, Kim, Y.S, Linhardt, R.J, Su, H, Cygler, M.
Deposit date:1999-11-03
Release date:2000-01-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
J.Mol.Biol., 294, 1999
1CI6
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TRANSCRIPTION FACTOR ATF4-C/EBP BETA BZIP HETERODIMER
Descriptor: BETA-MERCAPTOETHANOL, FE (III) ION, TRANSCRIPTION FACTOR ATF-4, ...
Authors:Podust, L.M, Kim, Y.
Deposit date:1999-04-07
Release date:2000-12-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the CCAAT box/enhancer-binding protein beta activating transcription factor-4 basic leucine zipper heterodimer in the absence of DNA
J.Biol.Chem., 276, 2001
1CJE
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ADRENODOXIN FROM BOVINE
Descriptor: ADRENODOXIN, FE2/S2 (INORGANIC) CLUSTER
Authors:Pikuleva, I.A, Tesh, K, Waterman, M.R, Kim, Y.
Deposit date:1999-04-12
Release date:2000-01-21
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The tertiary structure of full-length bovine adrenodoxin suggests functional dimers.
Arch.Biochem.Biophys., 373, 2000
8JZJ
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E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
Authors:Jang, K, Hlaing, S.H.S, Kim, H.G, Kim, N, Choe, H.W, Kim, Y.J.
Deposit date:2023-07-05
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
To Be Published
4UOX
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Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate and putrescine
Descriptor: 1,4-DIAMINOBUTANE, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-06-11
Release date:2014-12-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.085 Å)
Cite:Structure of Putrescine Aminotransferase from Escherichia Coli Provides Insights Into the Substrate Specificity Among Class III Aminotransferases.
Plos One, 9, 2014
7O2L
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Yeast 20S proteasome in complex with the covalently bound inhibitor b-lactone (2R,3S)-3-isopropyl-4-oxo-2-oxetane-carboxylate (IOC)
Descriptor: (2 {R},3 {S})-3-methanoyl-4-methyl-2-hydroxy-pentanoic acid, 20S proteasome, BJ4_G0020160.mRNA.1.CDS.1, ...
Authors:Shi, Y.M, Hirschmann, M, Shi, Y.N, Shabbir, A, Abebew, D, Tobias, N.J, Gruen, P, Crames, J.J, Poeschel, L, Kuttenlochner, W, Richter, C, Herrmann, J, Mueller, R, Thanwisai, A, Pidot, S.J, Stinear, T.P, Groll, M, Kim, Y, Bode, H.
Deposit date:2021-03-30
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria.
Nat.Chem., 14, 2022
4UOY
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Crystal structure of YgjG in complex with Pyridoxal-5'-phosphate
Descriptor: FORMIC ACID, GLYCEROL, PUTRESCINE AMINOTRANSFERASE, ...
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-06-11
Release date:2014-12-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Structure of Putrescine Aminotransferase from Escherichia Coli Provides Insights Into the Substrate Specificity Among Class III Aminotransferases.
Plos One, 9, 2014
4X3Z
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Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP and NAD
Descriptor: GLYCEROL, Inosine-5'-monophosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Osipiuk, J, MALTSEVA, N, KIM, Y, Mulligan, R, MAKOWSKA-GRZYSKA, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-12-02
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Inosine 5'-monophosphate dehydrogenase from Vibrio cholerae, deletion mutant, in complex with XMP and NAD
to be published
7BXA
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Crystal structure of PD-1 in complex with tislelizumab Fab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S, Lee, S.H, Lim, H, Lee, H.T, Kim, Y.J, Park, E.B.
Deposit date:2020-04-18
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Crystal structure of PD-1 in complex with an antibody-drug tislelizumab used in tumor immune checkpoint therapy.
Biochem.Biophys.Res.Commun., 527, 2020
1ACP
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BU of 1acp by Molmil
REFINEMENT OF THE NMR STRUCTURES FOR ACYL CARRIER PROTEIN WITH SCALAR COUPLING DATA
Descriptor: ACYL-CARRIER PROTEIN
Authors:Prestegard, J.H, Kim, Y.
Deposit date:1990-07-29
Release date:1993-04-15
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Refinement of the NMR structures for acyl carrier protein with scalar coupling data.
Proteins, 8, 1990
4XSJ
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Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter fused with T4 lysozyme
Descriptor: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-01-22
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
4XTB
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Crystal structure of the N-terminal domain of the human mitochondrial calcium uniporter
Descriptor: Calcium uniporter protein, mitochondrial, TETRAETHYLENE GLYCOL
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-01-23
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
8H87
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Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR2 in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR2, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2022-10-21
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
8H86
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Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR1, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2022-10-21
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
8IU0
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Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc
Descriptor: (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, HcKCR1, PALMITIC ACID, ...
Authors:Tajima, S, Kim, Y, Nakamura, S, Yamashita, K, Fukuda, M, Deisseroth, K, Kato, H.E.
Deposit date:2023-03-23
Release date:2023-09-06
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural basis for ion selectivity in potassium-selective channelrhodopsins.
Cell, 186, 2023
5BZ6
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Crystal structure of the N-terminal domain single mutant (S92A) of the human mitochondrial calcium uniporter fused with T4 lysozyme
Descriptor: Lysozyme,Calcium uniporter protein, mitochondrial, SULFATE ION
Authors:Lee, Y, Min, C.K, Kim, T.G, Song, H.K, Lim, Y, Kim, D, Shin, K, Kang, M, Kang, J.Y, Youn, H.-S, Lee, J.-G, An, J.Y, Park, K.R, Lim, J.J, Kim, J.H, Kim, J.H, Park, Z.Y, Kim, Y.-S, Wang, J, Kim, D.H, Eom, S.H.
Deposit date:2015-06-11
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure and function of the N-terminal domain of the human mitochondrial calcium uniporter.
Embo Rep., 16, 2015
7BU2
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Structure of alcohol dehydrogenase YjgB from Escherichia coli
Descriptor: Alcohol dehydrogenase, GLYCEROL, NITRATE ION, ...
Authors:Nguyen, G.T, Kim, Y.-G, Ahn, J.-W, Chang, J.H.
Deposit date:2020-04-03
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.553 Å)
Cite:Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli .
Molecules, 25, 2020
7BU3
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Structure of alcohol dehydrogenase YjgB in complex with NADP from Escherichia coli
Descriptor: ASPARTIC ACID, Alcohol dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Nguyen, G.T, Kim, Y.-G, Ahn, J.-W, Chang, J.H.
Deposit date:2020-04-03
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli .
Molecules, 25, 2020
4RT5
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The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
Authors:Wu, R, Bearden, J, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-13
Release date:2014-12-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from Planctomyces limnophilus dsm 3776
TO BE PUBLISHED
4XBB
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1.85A resolution structure of Norovirus 3CL protease complex with a covalently bound dipeptidyl inhibitor diethyl [(1R,2S)-2-[(N-{[(3-chlorobenzyl)oxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-(2-oxo-2H-pyrrol-3-yl)propyl]phosphonate
Descriptor: 3C-LIKE PROTEASE, SULFATE ION, diethyl [(1R,2S)-2-[(N-{[(3-chlorobenzyl)oxy]carbonyl}-3-cyclohexyl-L-alanyl)amino]-1-hydroxy-3-(2-oxo-2H-pyrrol-3-yl)propyl]phosphonate
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Weerawarna, P.M, Uy, R.A.Z, Damalanka, V.C, Mandadapu, S.R, Alliston, K.R, Groutas, W.C, Chang, K.-O.
Deposit date:2014-12-16
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Guided Design and Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease. Structure-Activity Relationships and Biochemical, X-ray Crystallographic, Cell-Based, and In Vivo Studies.
J.Med.Chem., 58, 2015
4UY5
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Crystal structure of Histidine-specific methyltransferase EgtD from Mycobacterium smegmatis
Descriptor: ACETATE ION, HISTIDINE-SPECIFIC METHYLTRANSFERASE EGTD, IMIDAZOLE
Authors:Jeong, J.H, Kim, Y.G.
Deposit date:2014-08-29
Release date:2014-10-08
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural Insights Into the Histidine Trimethylation Activity of Egtd from Mycobacterium Smegmatis.
Biochem.Biophys.Res.Commun., 452, 2014

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