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PDB: 56 results

6VTW
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BU of 6vtw by Molmil
De novo protein design enables the precise induction of RSV-neutralizing antibodies
Descriptor: 101F Fab Heavy Chain, 101F Fab Light Chain, S4_2.45
Authors:Jardetzky, T, Correia, B.
Deposit date:2020-02-13
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
4DAG
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BU of 4dag by Molmil
Structure of the Human Metapneumovirus Fusion Protein with Neutralizing Antibody Identifies a Pneumovirus Antigenic Site
Descriptor: Fusion glycoprotein F0, Neutralizing Antibody DS7 heavy chain, Neutralizing Antibody DS7 light chain, ...
Authors:Jardetzky, T.S, Wen, X.
Deposit date:2012-01-12
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.3904 Å)
Cite:Structure of the human metapneumovirus fusion protein with neutralizing antibody identifies a pneumovirus antigenic site.
Nat.Struct.Mol.Biol., 19, 2012
1SEB
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BU of 1seb by Molmil
COMPLEX OF THE HUMAN MHC CLASS II GLYCOPROTEIN HLA-DR1 AND THE BACTERIAL SUPERANTIGEN SEB
Descriptor: ENDOGENOUS PEPTIDE MODEL, POLY-ALA, ENTEROTOXIN TYPE B, ...
Authors:Jardetzky, T.S, Brown, J.H, Gorga, J.C, Stern, L.J, Urban, R.G, Chi, Y.I, Stauffacher, C, Strominger, J.L, Wiley, D.C.
Deposit date:1995-11-26
Release date:1996-06-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Three-dimensional structure of a human class II histocompatibility molecule complexed with superantigen.
Nature, 368, 1994
3MAW
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BU of 3maw by Molmil
Structure of the Newcastle disease virus F protein in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:Jardetzky, T.S, Wen, X.
Deposit date:2010-03-24
Release date:2010-05-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the Newcastle disease virus F protein in the post-fusion conformation.
Virology, 402, 2010
7MXI
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BU of 7mxi by Molmil
IgE-Fc in complex with DARPins E2_79 and E3_53
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-IgE Inhibitor E2_79, DARPin E3_53, ...
Authors:Pennington, L.F, Jardetzky, T.J.
Deposit date:2021-05-19
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-guided design of ultrapotent disruptive IgE inhibitors to rapidly terminate acute allergic reactions.
J.Allergy Clin.Immunol., 148, 2021
4WSG
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BU of 4wsg by Molmil
Crystal Structure of Soluble WR PIV5 F-GCNt
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:Poor, T.A, Song, A.S, Welch, B.D, Kors, C.A, Jardetzky, T.S, Lamb, R.A.
Deposit date:2014-10-27
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Soluble WR PIV5 F-GCNt
J.Virol., 89, 2015
1BXT
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BU of 1bxt by Molmil
STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES
Descriptor: PROTEIN (STREPTOCOCCAL SUPERANTIGEN)
Authors:Sundberg, E, Jardetzky, T.
Deposit date:1998-10-08
Release date:1998-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for HLA-DQ binding by the streptococcal superantigen SSA.
Nat.Struct.Biol., 6, 1999
2P6A
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BU of 2p6a by Molmil
The structure of the Activin:Follistatin 315 complex
Descriptor: Follistatin, Inhibin beta A chain, probable fragment of follistatin
Authors:Lerch, T.F, Shimasaki, S, Woodruff, T.K, Jardetzky, T.S.
Deposit date:2007-03-16
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and biophysical coupling of heparin and activin binding to follistatin isoform functions.
J.Biol.Chem., 282, 2007
5EJB
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BU of 5ejb by Molmil
Crystal structure of prefusion Hendra virus F protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, ...
Authors:Wong, J.W, Jardetzky, T.S, Paterson, R.G, Lamb, R.A.
Deposit date:2015-11-01
Release date:2016-01-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and stabilization of the Hendra virus F glycoprotein in its prefusion form.
Proc.Natl.Acad.Sci.USA, 113, 2016
8TQK
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BU of 8tqk by Molmil
Human parainfluenza virus type 3 prefusion F trimer in complex with rPIV3-18 Fab
Descriptor: Fusion glycoprotein F0, Heavy chain Fab rPIV3-18, Light chain Fab rPIV3-28
Authors:Otrelo-Cardoso, A.R, Jardetzky, T.S.
Deposit date:2023-08-07
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Functional and structural characteristics of human monoclonal antibodies that potently neutralize human parainfluenza virus type 3
To be published
8TQI
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BU of 8tqi by Molmil
Hemagglutinin-neuraminidase from Human parainfluenza virus type 3: complex with rPIV3-23 and rPIV3-28 Fabs
Descriptor: Heavy chain Fab rPIV3-23, Heavy chain Fab rPIV3-28, Hemagglutinin-neuraminidase, ...
Authors:Otrelo-Cardoso, A.R, Jardetzky, T.S.
Deposit date:2023-08-07
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Functional and structural characteristics of human monoclonal antibodies that potently neutralize human parainfluenza virus type 3
To Be Published
3FD4
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BU of 3fd4 by Molmil
Crystal Structure of Epstein-Barr virus gp42 protein
Descriptor: Glycoprotein gp42
Authors:Kirschner, A, Jardetzky, T.
Deposit date:2008-11-24
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Epstein-Barr virus glycoprotein 42 suggests a mechanism for triggering receptor-activated virus entry.
Structure, 17, 2009
7SI0
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BU of 7si0 by Molmil
IgE-Fc in complex with 813
Descriptor: 813 Variable fragment Heavy chain, 813 Variable fragment Light chain, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-12
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHY
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BU of 7shy by Molmil
IgE-Fc in complex with omalizumab scFv
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, IgE Fc, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
7SHZ
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BU of 7shz by Molmil
IgE-Fc in complex with HAE
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Pennington, L.F, Jardetzky, T.J, Kleinboelting, S.
Deposit date:2021-10-11
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex.
Nat Commun, 12, 2021
5HYS
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BU of 5hys by Molmil
Structure of IgE complexed with omalizumab
Descriptor: Epididymis luminal protein 214, Ig epsilon chain C region, SULFATE ION, ...
Authors:Pennington, L.F, Tarchevskaya, S.S, Sathiyamoorthy, K, Jardetzky, T.S.
Deposit date:2016-02-01
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of omalizumab therapy and omalizumab-mediated IgE exchange.
Nat Commun, 7, 2016
5U68
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BU of 5u68 by Molmil
Structural basis for antibody cross-neutralization of respiratory syncytial virus and human metapneumovirus
Descriptor: Chimera protein of Fusion glycoprotein F0 and Envelope glycoprotein, MPE8
Authors:Wen, X, Jardetzky, T.S.
Deposit date:2016-12-07
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.083 Å)
Cite:Structural basis for antibody cross-neutralization of respiratory syncytial virus and human metapneumovirus.
Nat Microbiol, 2, 2017
5T1D
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BU of 5t1d by Molmil
Crystal structure of EBV gHgL/gp42/E1D1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E1D1 IgG2a heavy chain, E1D1 IgG2a light chain, ...
Authors:Sathiyamoorthy, K, Jardetzky, T.S.
Deposit date:2016-08-18
Release date:2016-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for Epstein-Barr virus host cell tropism mediated by gp42 and gHgL entry glycoproteins.
Nat Commun, 7, 2016
6UQR
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BU of 6uqr by Molmil
Complex of IgE and Ligelizumab
Descriptor: IgE, Ligelizumab, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tarchevskaya, S.S, Kleinboelting, S, Jardetzky, T.S.
Deposit date:2019-10-21
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.6502912 Å)
Cite:The mechanistic and functional profile of the therapeutic anti-IgE antibody ligelizumab differs from omalizumab.
Nat Commun, 11, 2020
3PHF
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BU of 3phf by Molmil
Crystal Structure of the Epstein-Barr virus gH and gL complex
Descriptor: Envelope glycoprotein H, Envelope glycoprotein L
Authors:Matsuura, H, Kirschner, A.N, Jardetzky, T.S.
Deposit date:2010-11-04
Release date:2011-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.58 Å)
Cite:Crystal structure of the Epstein-Barr virus (EBV) glycoprotein H/glycoprotein L (gH/gL) complex.
Proc.Natl.Acad.Sci.USA, 107, 2010
3QW9
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BU of 3qw9 by Molmil
Crystal structure of betaglycan ZP-C domain
Descriptor: Transforming growth factor beta receptor type 3, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Lin, S.J, Jardetzky, T.S.
Deposit date:2011-02-27
Release date:2011-04-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of betaglycan zona pellucida (ZP)-C domain provides insights into ZP-mediated protein polymerization and TGF-{beta} binding.
Proc.Natl.Acad.Sci.USA, 108, 2011
8EAY
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BU of 8eay by Molmil
HMPV F complex with 4I3 Fab
Descriptor: 4I3 heavy chain protein, 4I3 light chain protein, Fusion glycoprotein F0
Authors:Wen, X, Jardetzky, T.S.
Deposit date:2022-08-30
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Potent cross-neutralization of respiratory syncytial virus and human metapneumovirus through a structurally conserved antibody recognition mode.
Cell Host Microbe, 31, 2023
8DZW
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BU of 8dzw by Molmil
RSV F trimer bound to RSV-199 Fab
Descriptor: RSV fusion protein, RSV-199 Heavy chain protein, RSV-199 Light chain protein
Authors:Wen, X, Jardetzky, T.S.
Deposit date:2022-08-08
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Potent cross-neutralization of respiratory syncytial virus and human metapneumovirus through a structurally conserved antibody recognition mode.
Cell Host Microbe, 31, 2023
8EBP
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BU of 8ebp by Molmil
HMPV F dimer bound to RSV-199 Fab
Descriptor: Fusion glycoprotein F0, RSV-199 heavy chain protein, RSV-199 light chain protein
Authors:Wen, X, Jardetzky, T.S.
Deposit date:2022-08-31
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Potent cross-neutralization of respiratory syncytial virus and human metapneumovirus through a structurally conserved antibody recognition mode.
Cell Host Microbe, 31, 2023
8E2U
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BU of 8e2u by Molmil
HMPV F monomer bound to RSV-199 Fab
Descriptor: Fusion glycoprotein F0, RSV-199 heavy chain, RSV-199 light chain
Authors:Wen, X, Jardetzky, T.S.
Deposit date:2022-08-16
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Potent cross-neutralization of respiratory syncytial virus and human metapneumovirus through a structurally conserved antibody recognition mode.
Cell Host Microbe, 31, 2023

 

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