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PDB: 3296 件

1O5B
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Dissecting and Designing Inhibitor Selectivity Determinants at the S1 site Using an Artificial Ala190 Protease (Ala190 uPA)
分子名称: 4-IODOBENZO[B]THIOPHENE-2-CARBOXAMIDINE, CITRIC ACID, Urokinase-type plasminogen activator
著者Katz, B.A, Luong, C, Ho, J.D, Somoza, J.R, Gjerstad, E, Tang, J, Williams, S.R, Verner, E, Mackman, R.L, Young, W.B, Sprengeler, P.A, Chan, H, Mortara, K, Janc, J.W, McGrath, M.E.
登録日2003-09-09
公開日2004-09-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Dissecting and designing inhibitor selectivity determinants at the S1 site using an artificial Ala190 protease (Ala190 uPA)
J.Mol.Biol., 344, 2004
1OBU
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Apocrustacyanin C1 crystals grown in space and earth using vapour diffusion geometry
分子名称: CRUSTACYANIN C1 SUBUNIT
著者Habash, J, Boggon, T.J, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
登録日2003-01-31
公開日2003-07-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Apocrustacyanin C(1) Crystals Grown in Space and on Earth Using Vapour-Diffusion Geometry: Protein Structure Refinements and Electron-Density Map Comparisons
Acta Crystallogr.,Sect.D, 59, 2003
6AYW
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The structure of human CamKII with bound inhibitor
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Calcium/calmodulin-dependent protein kinase type II subunit delta, N-[2-(dimethylamino)ethyl]-3-[6-(thiophen-2-yl)imidazo[1,2-b]pyridazin-3-yl]benzamide
著者Somoza, J.R, Villasenor, A.G.
登録日2017-09-08
公開日2017-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of human CamKII with bound inhibitor
To Be Published
5TRE
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Zinc and the Iron Donor Frataxin Regulate Oligomerization of the Scaffold Protein to Form New Fe-S Cluster Assembly Centers
分子名称: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
著者Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Thompson, J.R, Isaya, G.
登録日2016-10-26
公開日2017-06-07
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (15.6 Å)
主引用文献Zinc and the iron donor frataxin regulate oligomerization of the scaffold protein to form new Fe-S cluster assembly centers.
Metallomics, 9, 2017
5MLN
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The crystal structure of alcohol dehydrogenase 10 from Candida magnoliae
分子名称: Alcohol dehydrogenase 3, DI(HYDROXYETHYL)ETHER, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Castellanos, J.R.G, Mattevi, A.
登録日2016-12-07
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献One-Pot Biocatalytic Double Oxidation of alpha-Isophorone for the Synthesis of Ketoisophorone
Chemcatchem, 2017
1OBQ
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Apocrustacyanin C1 crystals grown in space and earth using vapour diffusion geometry
分子名称: CRUSTACYANIN C1 SUBUNIT
著者Habash, J, Boggon, T.J, Raftery, J, Chayen, N.E, Zagalsky, P.F, Helliwell, J.R.
登録日2003-01-31
公開日2003-07-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Apocrustacyanin C(1) Crystals Grown in Space and on Earth Using Vapour-Diffusion Geometry: Protein Structure Refinements and Electron-Density Map Comparisons
Acta Crystallogr.,Sect.D, 59, 2003
5TXT
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Structure of asymmetric apo/holo ALAS dimer from S. cerevisiae
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 5-aminolevulinate synthase, mitochondrial, ...
著者Brown, B.L, Grant, R.A, Kardon, J.R, Sauer, R.T, Baker, T.A.
登録日2016-11-17
公開日2018-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Mitochondrial Aminolevulinic Acid Synthase, a Key Heme Biosynthetic Enzyme.
Structure, 26, 2018
5UEC
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Crystal Structure of CYP2B6 (Y226H/K262R) in complex with myrtenyl bromide.
分子名称: (1S,5R)-2-(bromomethyl)-6,6-dimethylbicyclo[3.1.1]hept-2-ene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
著者Shah, M.B, Halpert, J.R.
登録日2016-12-30
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Halogen-pi Interactions in the Cytochrome P450 Active Site: Structural Insights into Human CYP2B6 Substrate Selectivity.
ACS Chem. Biol., 12, 2017
1NXI
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Solution structure of Vibrio cholerae protein VC0424
分子名称: conserved hypothetical protein VC0424
著者Ramelot, T.A, Ni, S, Goldsmith-Fischman, S, Cort, J.R, Honig, B, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2003-02-10
公開日2003-07-01
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Solution structure of Vibrio cholerae protein VC0424: a variation of the ferredoxin-like fold.
Protein Sci., 12, 2003
5U4R
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Crystal structure of the broadly neutralizing Influenza A antibody VRC 315 53-1A09 Fab.
分子名称: VRC 315 53-1A09 Fab Heavy chain, VRC 315 53-1A09 Fab Light chain
著者Joyce, M.G, Andrews, S.F, Mascola, J.R, McDermott, A.B, Kwong, P.D.
登録日2016-12-05
公開日2017-11-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Preferential induction of cross-group influenza A hemagglutinin stem-specific memory B cells after H7N9 immunization in humans.
Sci Immunol, 2, 2017
5MK7
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Crystal structure of the receptor-binding domain of botulinum neurotoxin A1 (crystal form 2)
分子名称: Botulinum neurotoxin type A
著者Davies, J.R, Acharya, K.R.
登録日2016-12-02
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High resolution crystal structures of the receptor-binding domain ofClostridium botulinumneurotoxin serotypes A and FA.
PeerJ, 6, 2018
6B74
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Structures of the two-chain human plasma Factor XIIa co-crystallized with potent inhibitors
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, Coagulation factor XII, ...
著者Dementiev, A.A, Partridge, J.R.
登録日2017-10-03
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.323 Å)
主引用文献Structures of human plasma beta-factor XIIa cocrystallized with potent inhibitors.
Blood Adv, 2, 2018
7ESR
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Crystal structure of Synechocystis sp PCC6803 guanidinium hydrolase (R32)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Mayans, O.M, Fleming, J.R.
登録日2021-05-11
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Discovery of a Ni 2+ -dependent guanidine hydrolase in bacteria.
Nature, 603, 2022
7EW6
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Barley photosystem I-LHCI-Lhca5 supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-24
公開日2021-12-22
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7F9O
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PSI-NDH supercomplex of Barley
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Shen, J.R, Zhang, X.
登録日2021-07-04
公開日2021-12-22
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7FEF
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Crystal structure of AtMBD6 with DNA
分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*(5CM)P*GP*TP*TP*GP*GP*C)-3'), Methyl-CpG-binding domain-containing protein 6
著者Wu, Z.B, Liu, K, Min, J.R.
登録日2021-07-19
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs.
J.Mol.Biol., 434, 2022
5TPX
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Bromodomain from Plasmodium Faciparum Gcn5, complexed with compound
分子名称: (1S,2S)-N~1~,N~1~-dimethyl-N~2~-(3-methyl[1,2,4]triazolo[3,4-a]phthalazin-6-yl)-1-phenylpropane-1,2-diamine, CHLORIDE ION, Histone acetyltransferase GCN5, ...
著者Lin, Y.H, Hou, C.F.D, MOUSTAKIM, M, DIXON, D.J, Loppnau, P, Tempel, W, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, BRENNAN, P.E, Walker, J.R, Structural Genomics Consortium (SGC)
登録日2016-10-21
公開日2017-01-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of a PCAF Bromodomain Chemical Probe.
Angew. Chem. Int. Ed. Engl., 56, 2017
7FEO
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Crystal structure of AtMBD5 MBD domain
分子名称: Methyl-CpG-binding domain-containing protein 5, SULFATE ION
著者Zhou, M.Q, Wu, Z.B, Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
登録日2021-07-21
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Family-wide Characterization of Methylated DNA Binding Ability of Arabidopsis MBDs.
J.Mol.Biol., 434, 2022
7EU3
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Chloroplast NDH complex
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-15
公開日2021-12-29
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
7EWK
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Barley photosystem I-LHCI-Lhca6 supercomplex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W.D, Shen, L, Tang, K, Han, G.Y, Zhang, X, Shen, J.R.
登録日2021-05-25
公開日2022-01-12
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Architecture of the chloroplast PSI-NDH supercomplex in Hordeum vulgare.
Nature, 601, 2022
5MK8
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Crystal structure of the receptor-binding domain of the FA hybrid Clostridium botulinum neurotoxin
分子名称: Botulinum neurotoxin FA binding domain, CHLORIDE ION, FORMIC ACID
著者Davies, J.R, Acharya, K.R.
登録日2016-12-02
公開日2018-03-28
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献High resolution crystal structures of the receptor-binding domain ofClostridium botulinumneurotoxin serotypes A and FA.
PeerJ, 6, 2018
1Q48
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Solution NMR Structure of The Haemophilus Influenzae Iron-Sulfur Cluster Assembly Protein U (IscU) with Zinc Bound at the Active Site. Northeast Structural Genomics Consortium Target IR24. This protein is not apo, it is a model without zinc binding constraints.
分子名称: NifU-like protein
著者Ramelot, T.A, Cort, J.R, Xiao, R, Shastry, R, Acton, T.B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2003-08-01
公開日2003-11-18
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR structure of the iron-sulfur cluster assembly protein U (IscU) with zinc bound at the active site.
J.Mol.Biol., 344, 2004
6BCM
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Structure of a Self-inhibited N475A variant of the Venezuelan Equine Encephalitis Virus (VEEV) nsP2 cysteine protease
分子名称: GLYCEROL, Protease nsP2, SODIUM ION
著者Compton, J.R, Legler, P.M.
登録日2017-10-20
公開日2017-11-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mutation of Asn-475 in the Venezuelan Equine Encephalitis Virus nsP2 Cysteine Protease Leads to a Self-Inhibited State.
Biochemistry, 56, 2017
6B2N
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Crystal structure of TEM-1 beta-lactamase mutant M182N
分子名称: Beta-lactamase TEM, SULFATE ION
著者Jimah, J.R, Tolia, N.H.
登録日2017-09-20
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Prediction of New Stabilizing Mutations Based on Mechanistic Insights from Markov State Models.
ACS Cent Sci, 3, 2017
7JZ2
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Succinate: quinone oxidoreductase SQR from E.coli K12
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Lyu, M, Su, C.-C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W.
登録日2020-09-01
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021

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