Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2437 results

4UCY
DownloadVisualize
BU of 4ucy by Molmil
X-ray structure and activities of an essential Mononegavirales L- protein domain
Descriptor: RNA-DIRECTED RNA POLYMERASE L, SULFATE ION, ZINC ION
Authors:Paesen, G.C, Collet, A, Sallamand, C, Debart, F, Vasseur, J.J, Canard, B, Decroly, E, Grimes, J.M.
Deposit date:2014-12-05
Release date:2015-11-18
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:X-Ray Structure and Activities of an Essential Mononegavirales L-Protein Domain.
Nat.Commun., 6, 2015
7V6A
DownloadVisualize
BU of 7v6a by Molmil
Cry-EM structure of M4-c110-G protein complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.J, Wu, M, Wu, L.J, Hua, T, Liu, Z.J, Wang, T.
Deposit date:2021-08-20
Release date:2022-05-11
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The unconventional activation of the muscarinic acetylcholine receptor M4R by diverse ligands.
Nat Commun, 13, 2022
7V69
DownloadVisualize
BU of 7v69 by Molmil
Cryo-EM structure of a class A GPCR-G protein complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Wang, J.J, Wu, M, Wu, L.J, Hua, T, Liu, Z.J, Wang, T.
Deposit date:2021-08-20
Release date:2022-05-11
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The unconventional activation of the muscarinic acetylcholine receptor M4R by diverse ligands.
Nat Commun, 13, 2022
6NMU
DownloadVisualize
BU of 6nmu by Molmil
Kick-Off Fab 115 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Descriptor: Fab 115 anti-SIRP-alpha antibody Variable Heavy Chain, Fab 115 anti-SIRP-alpha antibody Variable Light Chain, Tyrosine-protein phosphatase non-receptor type substrate 1
Authors:Wibowo, A.S, Carter, J.J, Sim, J.
Deposit date:2019-01-11
Release date:2019-08-07
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Discovery of high affinity, pan-allelic, and pan-mammalian reactive antibodies against the myeloid checkpoint receptor SIRP alpha.
Mabs, 11, 2019
5I79
DownloadVisualize
BU of 5i79 by Molmil
Crystal structure of a beta-1,4-endoglucanase mutant from Aspergillus niger in complex with sugar
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Endo-beta-1, ...
Authors:Liu, W.D, Yan, J.J, Li, Y.J, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2016-02-17
Release date:2016-12-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Functional and structural analysis of Pichia pastoris-expressed Aspergillus niger 1,4-beta-endoglucanase
Biochem. Biophys. Res. Commun., 475, 2016
2W80
DownloadVisualize
BU of 2w80 by Molmil
Structure of a complex between Neisseria meningitidis factor H binding protein and CCPs 6-7 of human complement factor H
Descriptor: COMPLEMENT FACTOR H, FACTOR H BINDING PROTEIN
Authors:Schneider, M.C, Prosser, B.E, Caesar, J.J.E, Kugelberg, E, Li, S, Zhang, Q, Quoraishi, S, Lovett, J.E, Deane, J.E, Sim, R.B, Roversi, P, Johnson, S, Tang, C.M, Lea, S.M.
Deposit date:2009-01-08
Release date:2009-03-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Neisseria Meningitidis Recruits Factor H Using Protein Mimicry of Host Carbohydrates.
Nature, 458, 2009
4GWP
DownloadVisualize
BU of 4gwp by Molmil
Structure of the Mediator Head Module from S. cerevisiae
Descriptor: Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, Mediator of RNA polymerase II transcription subunit 18, ...
Authors:Robinson, P.J.J, Bushnell, D.A, Trnka, M.J, Burlingame, A.L, Kornberg, R.D.
Deposit date:2012-09-03
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structure of the Mediator Head module bound to the carboxy-terminal domain of RNA polymerase II.
Proc.Natl.Acad.Sci.USA, 109, 2012
4GNK
DownloadVisualize
BU of 4gnk by Molmil
Crystal structure of Galphaq in complex with full-length human PLCbeta3
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Lyon, A.M, Tesmer, J.J.G.
Deposit date:2012-08-17
Release date:2013-02-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Full-length G alpha (q)-phospholipase C-beta 3 structure reveals interfaces of the C-terminal coiled-coil domain.
Nat.Struct.Mol.Biol., 20, 2013
1L1M
DownloadVisualize
BU of 1l1m by Molmil
SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
Descriptor: 5'-D(*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3', 5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3', Lactose operon repressor
Authors:Kalodimos, C.G, Bonvin, A.M.J.J, Salinas, R.K, Wechselberger, R, Boelens, R, Kaptein, R.
Deposit date:2002-02-19
Release date:2002-06-26
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain.
EMBO J., 21, 2002
2W81
DownloadVisualize
BU of 2w81 by Molmil
Structure of a complex between Neisseria meningitidis factor H binding protein and CCPs 6-7 of human complement factor H
Descriptor: COMPLEMENT FACTOR H, FACTOR H BINDING PROTEIN
Authors:Schneider, M.C, Prosser, B.E, Caesar, J.J.E, Kugelberg, E, Li, S, Zhang, Q, Quoraishi, S, Lovett, J.E, Deane, J.E, Sim, R.B, Roversi, P, Johnson, S, Tang, C.M, Lea, S.M.
Deposit date:2009-01-08
Release date:2009-03-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Neisseria Meningitidis Recruits Factor H Using Protein Mimicry of Host Carbohydrates.
Nature, 458, 2009
3N97
DownloadVisualize
BU of 3n97 by Molmil
RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA
Descriptor: ACETATE ION, DNA (5'-D(*CP*CP*AP*TP*GP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*AP*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*CP*AP*TP*GP*G)-3'), ...
Authors:Lara-Gonzalez, S, Birktoft, J.J, Lawson, C.L.
Deposit date:2010-05-28
Release date:2011-06-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.252 Å)
Cite:The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element.
Biochemistry, 59, 2020
1XWQ
DownloadVisualize
BU of 1xwq by Molmil
Structure Of A Cold-Adapted Family 8 Xylanase
Descriptor: beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, endo-1,4-beta-xylanase
Authors:De Vos, D, Collins, T, Hoyoux, A, Savvides, S.N, Gerday, C, Van Beeumen, J.J, Feller, G.
Deposit date:2004-11-02
Release date:2005-10-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Study of the active site residues of a glycoside hydrolase family 8 xylanase
J.Mol.Biol., 354, 2005
4N3T
DownloadVisualize
BU of 4n3t by Molmil
Candida albicans Superoxide Dismutase 5 (SOD5), Cu(I)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COPPER (I) ION, Potential secreted Cu/Zn superoxide dismutase, ...
Authors:Galaleldeen, A, Taylor, A.B, Waninger-Saroni, J.J, Holloway, S.P, Hart, P.J.
Deposit date:2013-10-07
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Candida albicans SOD5 represents the prototype of an unprecedented class of Cu-only superoxide dismutases required for pathogen defense.
Proc.Natl.Acad.Sci.USA, 111, 2014
4GWQ
DownloadVisualize
BU of 4gwq by Molmil
Structure of the Mediator Head Module from S. cerevisiae in complex with the carboxy-terminal domain (CTD) of RNA Polymerase II Rpb1 subunit
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, ...
Authors:Robinson, P.J.J, Bushnell, D.A, Trnka, M.J, Burlingame, A.L, Kornberg, R.D.
Deposit date:2012-09-03
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structure of the Mediator Head module bound to the carboxy-terminal domain of RNA polymerase II.
Proc.Natl.Acad.Sci.USA, 109, 2012
7WB1
DownloadVisualize
BU of 7wb1 by Molmil
PlmCasX-sgRNAv2-dsDNA ternary complex at nts loading state
Descriptor: NTS-DNA, RNA (121-MER), TS-DNA, ...
Authors:Zhang, S, Liu, J.J.G.
Deposit date:2021-12-15
Release date:2022-03-16
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Chimeric CRISPR-CasX enzymes and guide RNAs for improved genome editing activity.
Mol.Cell, 82, 2022
1XWT
DownloadVisualize
BU of 1xwt by Molmil
Structure Of A Cold-Adapted Family 8 Xylanase
Descriptor: endo-1,4-beta-xylanase
Authors:De Vos, D, Collins, T, Hoyoux, A, Savvides, S.N, Gerday, C, Van Beeumen, J.J, Feller, G.
Deposit date:2004-11-02
Release date:2005-10-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Study of the active site residues of a glycoside hydrolase family 8 xylanase
J.Mol.Biol., 354, 2005
3RQU
DownloadVisualize
BU of 3rqu by Molmil
Crystal structure of a prokaryotic pentameric ligand-gated ion channel, ELIC
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, GLYCEROL
Authors:Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
Deposit date:2011-04-28
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.089 Å)
Cite:Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
5W5V
DownloadVisualize
BU of 5w5v by Molmil
TBK1 co-crystal structure with amlexanox
Descriptor: 2-amino-7-(1-methylethyl)-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxylic acid, Serine/threonine-protein kinase TBK1
Authors:Beyett, T.S, Tesmer, J.J.G.
Deposit date:2017-06-15
Release date:2018-06-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.645 Å)
Cite:Carboxylic Acid Derivatives of Amlexanox Display Enhanced Potency toward TBK1 and IKKepsilonand Reveal Mechanisms for Selective Inhibition.
Mol. Pharmacol., 94, 2018
7XIV
DownloadVisualize
BU of 7xiv by Molmil
Structural insight into the interactions between Lloviu virus VP30 and nucleoprotein
Descriptor: Nucleocapsid protein,Minor nucleoprotein VP30
Authors:Dong, S.S, Qin, X.C, Sun, W.Y, Luan, F.C, Wang, J.J, Ma, L, Li, X.X, Yang, G.X, Hao, C.Y.
Deposit date:2022-04-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structural insights into the interactions between lloviu virus VP30 and nucleoprotein.
Biochem.Biophys.Res.Commun., 616, 2022
7XC2
DownloadVisualize
BU of 7xc2 by Molmil
Cryo EM structure of oligomeric complex formed by wheat CNL Sr35 and the effector AvrSr35 of the wheat stem rust pathogen
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Avirulence factor, CNL9
Authors:Alexander, F, Li, E.T, Aaron, L, Deng, Y.N, Sun, Y, Chai, J.J.
Deposit date:2022-03-22
Release date:2022-09-21
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A wheat resistosome defines common principles of immune receptor channels.
Nature, 610, 2022
7XDD
DownloadVisualize
BU of 7xdd by Molmil
Cryo-EM structure of EDS1 and PAD4
Descriptor: Lipase-like PAD4, Protein EDS1
Authors:Huang, S.J, Jia, A.L, Sun, Y, Han, Z.F, Chai, J.J.
Deposit date:2022-03-26
Release date:2022-07-13
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Identification and receptor mechanism of TIR-catalyzed small molecules in plant immunity.
Science, 377, 2022
7XJP
DownloadVisualize
BU of 7xjp by Molmil
Cryo-EM structure of EDS1 and SAG101 with ATP-APDR
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, ISOPROPYL ALCOHOL, ...
Authors:Huang, S.J, Jia, A.L, Han, Z.F, Chai, J.J.
Deposit date:2022-04-18
Release date:2022-07-20
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity.
Science, 377, 2022
4QGN
DownloadVisualize
BU of 4qgn by Molmil
Human acireductone dioxygenase with iron ion and L-methionine in active center
Descriptor: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, ACETATE ION, CHLORIDE ION, ...
Authors:Milaczewska, A.M, Chruszcz, M, Petkowski, J.J, Niedzialkowska, E, Minor, W, Borowski, T.
Deposit date:2014-05-23
Release date:2015-05-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:On the Structure and Reaction Mechanism of Human Acireductone Dioxygenase.
Chemistry, 24, 2018
5T19
DownloadVisualize
BU of 5t19 by Molmil
Structure of PTP1B complexed with N-(3'-(1,1-dioxido-4-oxo-1,2,5-thiadiazolidin-2-yl)-4'-methyl-[1,1'-biphenyl]-4-yl)acetamide
Descriptor: 5-[4-methyl-4'-(methylamino)[1,1'-biphenyl]-3-yl]-1lambda~6~,2,5-thiadiazolidine-1,1,3-trione, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Laciak, A.R, Tanner, J.J.
Deposit date:2016-08-18
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1001 Å)
Cite:Covalent Allosteric Inactivation of Protein Tyrosine Phosphatase 1B (PTP1B) by an Inhibitor-Electrophile Conjugate.
Biochemistry, 56, 2017
1LQC
DownloadVisualize
BU of 1lqc by Molmil
LAC REPRESSOR HEADPIECE (RESIDUES 1-56), NMR, 32 STRUCTURES
Descriptor: LAC REPRESSOR
Authors:Slijper, M, Bonvin, A.M.J.J, Boelens, R, Kaptein, R.
Deposit date:1996-08-13
Release date:1997-02-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data: change of tertiary structure upon binding to the lac operator.
J.Mol.Biol., 259, 1996

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon