Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2437 results

9JDV
DownloadVisualize
BU of 9jdv by Molmil
Human URAT1 bound with Uric acid
Descriptor: Solute carrier family 22 member 12, URIC ACID
Authors:Wu, C, Zhang, C, Jin, S, Wang, J.J, Jiang, Y, Yang, D, Xu, H.E.
Deposit date:2024-09-01
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Molecular mechanisms of uric acid transport by the native human URAT1 and its inhibition by anti-gout drugs
Biorxiv, 2024
9GD0
DownloadVisualize
BU of 9gd0 by Molmil
Structure of a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.
Descriptor: DNA (250-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L.
Deposit date:2024-08-04
Release date:2024-09-18
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Mol.Cell, 84, 2024
9F6I
DownloadVisualize
BU of 9f6i by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Post-Insertion state)
Descriptor: 2',3'-dideoxyadenosine triphosphate, CALCIUM ION, DNA nascent strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
9JDY
DownloadVisualize
BU of 9jdy by Molmil
Human URAT1 bound with verinurad
Descriptor: Solute carrier family 22 member 12, verinurad
Authors:Wu, C, Zhang, C, Jin, S, Wang, J.J, Dai, A, Jiang, Y, Yang, D, Xu, H.E.
Deposit date:2024-09-01
Release date:2024-10-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Molecular mechanisms of uric acid transport by the native human URAT1 and its inhibition by anti-gout drugs
Biorxiv, 2024
8YAI
DownloadVisualize
BU of 8yai by Molmil
Crystal structure of glucose 1-dehydrogenase mutant1 from Limosilactobacillus fermentum
Descriptor: SDR family oxidoreductase
Authors:Cong, L, Wang, J.J, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-02-09
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir
Adv.Synth.Catal., 2024
8YAV
DownloadVisualize
BU of 8yav by Molmil
Crystal structure of glucose 1-dehydrogenase from Limosilactobacillus fermentum
Descriptor: MAGNESIUM ION, SDR family oxidoreductase
Authors:Cong, L, Wang, J.J, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-02-10
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir.
Adv.Synth.Catal., n/a, 2024
8ZAX
DownloadVisualize
BU of 8zax by Molmil
Crystal structure of a short-chain dehydrogenase from Lactobacillus fermentum with NADPH
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SDR family oxidoreductase
Authors:Wang, J.J, Cong, L, Wei, H.L, Liu, W.D, You, S.
Deposit date:2024-04-25
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure-Guided Engineering of a Short-Chain Dehydrogenase LfSDR1 for Efficient Biosynthesis of (R)-9-(2-Hydroxypropyl)adenine, the Key Intermediate of Tenofovir
Adv.Synth.Catal., 2024
3OMY
DownloadVisualize
BU of 3omy by Molmil
Crystal structure of the pED208 TraM N-terminal domain
Descriptor: GLYCEROL, MAGNESIUM ION, Protein traM
Authors:Wong, J.J.W, Lu, J, Edwards, R.A, Frost, L.S, Mark Glover, J.N.
Deposit date:2010-08-27
Release date:2011-05-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis of cooperative DNA recognition by the plasmid conjugation factor, TraM.
Nucleic Acids Res., 39, 2011
8YAA
DownloadVisualize
BU of 8yaa by Molmil
Cryo-EM structure of MIK2-SCOOP12-BAK1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, ...
Authors:Jia, F.S, Xiao, Y, Chai, J.J.
Deposit date:2024-02-08
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of MIK2-SCOOP12-BAK1
To Be Published
2H6E
DownloadVisualize
BU of 2h6e by Molmil
Crystal structure of the D-arabinose dehydrogenase from Sulfolobus solfataricus
Descriptor: D-arabinose 1-dehydrogenase, ZINC ION
Authors:Brouns, S.J.J, Turnbull, A.P, Akerboom, J, Willemen, H.L.D.M, De Vos, W.M, Van der Oost, J.
Deposit date:2006-05-31
Release date:2007-06-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Biochemical Properties of the d-Arabinose Dehydrogenase from Sulfolobus solfataricus
J.Mol.Biol., 371, 2007
3ON0
DownloadVisualize
BU of 3on0 by Molmil
Crystal structure of the pED208 TraM-sbmA complex
Descriptor: Protein traM, sbmA
Authors:Wong, J.J.W, Lu, J, Edwards, R.A, Frost, L.S, Mark Glover, J.N.
Deposit date:2010-08-27
Release date:2011-05-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.874 Å)
Cite:Structural basis of cooperative DNA recognition by the plasmid conjugation factor, TraM.
Nucleic Acids Res., 39, 2011
8UAP
DownloadVisualize
BU of 8uap by Molmil
Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 D311N in Complex with CCG273441
Descriptor: (3Z)-3-{[4-(2-chloroacetamido)-3,5-dimethyl-1H-pyrrol-2-yl]methylidene}-N-[(1R)-1-(4-fluorophenyl)ethyl]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide, G protein-coupled receptor kinase 5
Authors:Chen, Y, Tesmer, J.J.G.
Deposit date:2023-09-21
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Development of a new class of potent and highly selective G protein-coupled receptor kinase 5 inhibitors and structural insight from crystal structures of inhibitor complexes.
Eur.J.Med.Chem., 264, 2023
8UAQ
DownloadVisualize
BU of 8uaq by Molmil
Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL018-21
Descriptor: (3Z)-N-[(1R)-1-(4-fluorophenyl)ethyl]-3-[(4-{[(2S)-2-(furan-2-yl)-2-hydroxyacetyl]amino}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide, G protein-coupled receptor kinase 5
Authors:Chen, Y, Tesmer, J.J.G.
Deposit date:2023-09-21
Release date:2023-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Development of a new class of potent and highly selective G protein-coupled receptor kinase 5 inhibitors and structural insight from crystal structures of inhibitor complexes.
Eur.J.Med.Chem., 264, 2023
6BNM
DownloadVisualize
BU of 6bnm by Molmil
Crystal Structure of the P-Rex2 PH domain
Descriptor: CHLORIDE ION, Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein
Authors:Cash, J.N, Sharma, P.V, Tesmer, J.J.G.
Deposit date:2017-11-17
Release date:2018-11-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biochemical characterization of the pleckstrin homology domain of the RhoGEF P-Rex2 and its regulation by PIP3.
J.Struct.Biol., 1, 2019
2HIH
DownloadVisualize
BU of 2hih by Molmil
Crystal structure of Staphylococcus hyicus lipase
Descriptor: CALCIUM ION, Lipase 46 kDa form, ZINC ION
Authors:Tiesinga, J.J.W, van Pouderoyen, G, Nardini, M, Dijkstra, B.W.
Deposit date:2006-06-29
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural basis of phospholipase activity of Staphylococcus hyicus lipase.
J.Mol.Biol., 371, 2007
6C2Y
DownloadVisualize
BU of 6c2y by Molmil
Human GRK2 in complex with Gbetagamma subunits and CCG257142
Descriptor: (4R,5R,6S)-4-[4-fluoro-3-({[3-(methoxymethyl)-1,2,4-oxadiazol-5-yl]methyl}carbamoyl)phenyl]-N-(2H-indazol-5-yl)-6-methyl-2-oxohexahydropyrimidine-5-carboxamide, Beta-adrenergic receptor kinase 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Bouley, R, Tesmer, J.J.G.
Deposit date:2018-01-09
Release date:2018-04-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Utilizing a structure-based docking approach to develop potent G protein-coupled receptor kinase (GRK) 2 and 5 inhibitors.
Bioorg. Med. Chem. Lett., 28, 2018
2I1J
DownloadVisualize
BU of 2i1j by Molmil
Moesin from Spodoptera frugiperda at 2.1 angstroms resolution
Descriptor: CHLORIDE ION, GLYCEROL, Moesin, ...
Authors:Li, Q, Nance, M.R, Tesmer, J.J.G.
Deposit date:2006-08-14
Release date:2006-12-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Self-masking in an Intact ERM-merlin Protein: An Active Role for the Central alpha-Helical Domain.
J.Mol.Biol., 365, 2007
2I1K
DownloadVisualize
BU of 2i1k by Molmil
Moesin from Spodoptera frugiperda reveals the coiled-coil domain at 3.0 angstrom resolution
Descriptor: CHLORIDE ION, GLYCEROL, Moesin, ...
Authors:Nance, M.R, Tesmer, J.J.G.
Deposit date:2006-08-14
Release date:2006-12-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Self-masking in an Intact ERM-merlin Protein: An Active Role for the Central alpha-Helical Domain.
J.Mol.Biol., 365, 2007
6CQ5
DownloadVisualize
BU of 6cq5 by Molmil
TBK1 in Complex with Sulfone Analog of Amlexanox
Descriptor: 2-amino-7-(1,1-dioxo-1lambda~6~-thian-4-yl)-5-oxo-5H-[1]benzopyrano[2,3-b]pyridine-3-carboxylic acid, Serine/threonine-protein kinase TBK1
Authors:Beyett, T.S, Tesmer, J.J.G.
Deposit date:2018-03-14
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.354 Å)
Cite:Design, synthesis, and biological activity of substituted 2-amino-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxylic acid derivatives as inhibitors of the inflammatory kinases TBK1 and IKK epsilon for the treatment of obesity.
Bioorg. Med. Chem., 26, 2018
3QR0
DownloadVisualize
BU of 3qr0 by Molmil
Crystal Structure of S. officinalis PLC21
Descriptor: CALCIUM ION, GLYCEROL, phospholipase C-beta (PLC-beta)
Authors:Lyon, A.M, Northup, J.K, Tesmer, J.J.G.
Deposit date:2011-02-16
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:An autoinhibitory helix in the C-terminal region of phospholipase C-beta mediates Galphaq activation.
Nat.Struct.Mol.Biol., 18, 2011
6CQ4
DownloadVisualize
BU of 6cq4 by Molmil
TBK1 in Complex with Cyclohexyl Analog of Amlexanox
Descriptor: 2-amino-7-(4,4-difluorocyclohexyl)-5-oxo-5H-[1]benzopyrano[2,3-b]pyridine-3-carboxylic acid, Serine/threonine-protein kinase TBK1
Authors:Beyett, T.S, Tesmer, J.J.G.
Deposit date:2018-03-14
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design, synthesis, and biological activity of substituted 2-amino-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxylic acid derivatives as inhibitors of the inflammatory kinases TBK1 and IKK epsilon for the treatment of obesity.
Bioorg. Med. Chem., 26, 2018
3PUI
DownloadVisualize
BU of 3pui by Molmil
Cocaine Esterase with mutations G4C, S10C
Descriptor: CHLORIDE ION, Cocaine esterase, SODIUM ION
Authors:Nance, M.R, Tesmer, J.J.G.
Deposit date:2010-12-04
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Subunit stabilization and polyethylene glycolation of cocaine esterase improves in vivo residence time.
Mol.Pharmacol., 80, 2011
6CQ0
DownloadVisualize
BU of 6cq0 by Molmil
TBK1 in Complex with Dimethyl Amino Analog of Amlexanox
Descriptor: 2-amino-7-[3-(dimethylamino)propyl]-5-oxo-5H-[1]benzopyrano[2,3-b]pyridine-3-carboxylic acid, Serine/threonine-protein kinase TBK1
Authors:Beyett, T.S, Tesmer, J.J.G.
Deposit date:2018-03-14
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Design, synthesis, and biological activity of substituted 2-amino-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxylic acid derivatives as inhibitors of the inflammatory kinases TBK1 and IKK epsilon for the treatment of obesity.
Bioorg. Med. Chem., 26, 2018
7SJ4
DownloadVisualize
BU of 7sj4 by Molmil
Human Trio residues 1284-1959 in complex with Rac1
Descriptor: Ras-related C3 botulinum toxin substrate 1, Triple functional domain protein
Authors:Chen, C.-L, Ravala, S.K, Bandekar, S.J, Cash, J, Tesmer, J.J.G.
Deposit date:2021-10-15
Release date:2022-07-06
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural/functional studies of Trio provide insights into its configuration and show that conserved linker elements enhance its activity for Rac1.
J.Biol.Chem., 298, 2022
7SK6
DownloadVisualize
BU of 7sk6 by Molmil
Cryo-EM structure of human ACKR3 in complex with chemokine N-terminal mutant CXCL12_LRHQ and an intracellular Fab
Descriptor: Atypical chemokine receptor 3, CID24 Fab heavy chain, CID24 Fab light chain, ...
Authors:Yen, Y.C, Schafer, C.T, Gustavsson, M, Handel, T.M, Tesmer, J.J.G.
Deposit date:2021-10-19
Release date:2022-07-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structures of atypical chemokine receptor 3 reveal the basis for its promiscuity and signaling bias.
Sci Adv, 8, 2022

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon