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PDB: 2437 results

3GBI
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BU of 3gbi by Molmil
The Rational Design and Structural Analysis of a Self-Assembled Three-Dimensional DNA Crystal
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), ...
Authors:Birktoft, J.J, Zheng, J, Seeman, N.C.
Deposit date:2009-02-19
Release date:2009-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.018 Å)
Cite:From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal.
Nature, 461, 2009
3HAD
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BU of 3had by Molmil
BIOCHEMICAL CHARACTERIZATION AND STRUCTURE DETERMINATION OF HUMAN HEART SHORT CHAIN L-3-HYDROXYACYL COA DEHYDROGENASE PROVIDE INSIGHT INTO CATALYTIC MECHANISM
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (L-3-HYDROXYACYL COA DEHYDROGENASE)
Authors:Barycki, J.J, Bratt, J.M, Banaszak, L.J.
Deposit date:1998-12-03
Release date:2000-01-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical characterization and crystal structure determination of human heart short chain L-3-hydroxyacyl-CoA dehydrogenase provide insights into catalytic mechanism.
Biochemistry, 38, 1999
3GOE
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BU of 3goe by Molmil
Molecular Mimicry of SUMO promotes DNA repair
Descriptor: CALCIUM ION, DNA repair protein rad60
Authors:Perry, J.J.P.
Deposit date:2009-03-19
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Molecular mimicry of SUMO promotes DNA repair.
Nat.Struct.Mol.Biol., 16, 2009
3HG1
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BU of 3hg1 by Molmil
Germline-governed recognition of a cancer epitope by an immunodominant human T cell receptor
Descriptor: Beta-2-microglobulin, CANCER/MART-1, GLYCEROL, ...
Authors:Cole, D.K, Yuan, F, Rizkallah, P.J, Miles, J.J, Gostick, E, Price, D.A, Gao, G.F, Jakobsen, B.K, Sewell, A.K.
Deposit date:2009-05-13
Release date:2009-07-28
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Germ line-governed recognition of a cancer epitope by an immunodominant human T-cell receptor.
J.Biol.Chem., 284, 2009
3HDL
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BU of 3hdl by Molmil
Crystal Structure of Highly Glycosylated Peroxidase from Royal Palm Tree
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Watanabe, L, Moura, P.R, Bleicher, L, Nascimento, A.S, Zamorano, L.S, Calvete, J.J, Bursakov, S, Roig, M.G, Shnyrov, V.L, Polikarpov, I.
Deposit date:2009-05-07
Release date:2009-11-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and statistical coupling analysis of highly glycosylated peroxidase from royal palm tree (Roystonea regia).
J.Struct.Biol., 169, 2010
3I2J
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BU of 3i2j by Molmil
Cocaine Esterase, wild type, without a ligand
Descriptor: CHLORIDE ION, Cocaine esterase, GLYCEROL, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3I2I
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BU of 3i2i by Molmil
Cocaine Esterase with mutation T172R, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3HMG
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BU of 3hmg by Molmil
REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HEMAGGLUTININ, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Weis, W.I, Bruenger, A.T, Skehel, J.J, Wiley, D.C.
Deposit date:1989-09-11
Release date:1991-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Refinement of the influenza virus hemagglutinin by simulated annealing.
J.Mol.Biol., 212, 1990
3IT3
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BU of 3it3 by Molmil
Crystal Structure Francisella tularensis histidine acid phosphatase D261A mutant complexed with substrate 3'-AMP
Descriptor: Acid phosphatase, [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
Authors:Singh, H, Felts, R.L, Reilly, T.J, Tanner, J.J.
Deposit date:2009-08-27
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.
J.Mol.Biol., 394, 2009
3IDA
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BU of 3ida by Molmil
Thermostable Cocaine Esterase with mutations L169K and G173Q, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-07-20
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A thermally stable form of bacterial cocaine esterase: a potential therapeutic agent for treatment of cocaine abuse.
Mol.Pharmacol., 77, 2010
3IG8
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BU of 3ig8 by Molmil
Saccharomyces cerevisiae glutamate cysteine ligase in complex with Mg2+, L-glutamate and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Glutamate-cysteine ligase, ...
Authors:Biterova, E, Barycki, J.J.
Deposit date:2009-07-27
Release date:2009-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Mechanistic details of glutathione biosynthesis revealed by crystal structures of Saccharomyces cerevisiae glutamate cysteine ligase.
J.Biol.Chem., 284, 2009
3ITG
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BU of 3itg by Molmil
Structure the proline utilization A proline dehydrogenase domain (PutA86-630) inactivated with N-propargylglycine
Descriptor: Bifunctional protein putA, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:Tanner, J.J.
Deposit date:2009-08-28
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of the proline utilization a proline dehydrogenase domain inactivated by N-propargylglycine provides insight into conformational changes induced by substrate binding and flavin reduction.
Biochemistry, 49, 2010
3IG5
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BU of 3ig5 by Molmil
Saccharomyces cerevisiae glutamate cysteine ligase in complex with Mg2+ and L-glutamate
Descriptor: GLUTAMIC ACID, Glutamate-cysteine ligase, MAGNESIUM ION, ...
Authors:Biterova, E, Barycki, J.J.
Deposit date:2009-07-27
Release date:2009-09-01
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanistic details of glutathione biosynthesis revealed by crystal structures of Saccharomyces cerevisiae glutamate cysteine ligase.
J.Biol.Chem., 284, 2009
3IT1
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BU of 3it1 by Molmil
Crystal Structure Francisella tularensis histidine acid phosphatase complexed with L(+)-tartrate
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, ACETATE ION, Acid phosphatase, ...
Authors:Singh, H, Felts, R.L, Reilly, T.J, Tanner, J.J.
Deposit date:2009-08-27
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.691 Å)
Cite:Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.
J.Mol.Biol., 394, 2009
3GEQ
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BU of 3geq by Molmil
Structural basis for the chemical rescue of Src kinase activity
Descriptor: 1-TERT-BUTYL-3-(4-CHLORO-PHENYL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, Proto-oncogene tyrosine-protein kinase Src
Authors:Muratore, K.E, Seeliger, M.A, Wang, Z, Fomina, D, Neiswinger, J, Havranek, J.J, Baker, D, Kuriyan, J, Cole, P.A.
Deposit date:2009-02-25
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comparative analysis of mutant tyrosine kinase chemical rescue.
Biochemistry, 48, 2009
3HVC
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BU of 3hvc by Molmil
Crystal structure of human p38alpha MAP kinase
Descriptor: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE, Mitogen-activated protein kinase 14
Authors:Perry, J.J, Tainer, J.A.
Deposit date:2009-06-15
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:p38alpha MAP kinase C-terminal domain binding pocket characterized by crystallographic and computational analyses.
J.Mol.Biol., 391, 2009
3I2H
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BU of 3i2h by Molmil
Cocaine Esterase with mutation L169K, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
3IT0
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BU of 3it0 by Molmil
Crystal Structure Francisella tularensis histidine acid phosphatase complexed with phosphate
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, Acid phosphatase, PENTAETHYLENE GLYCOL, ...
Authors:Singh, H, Felts, R.L, Reilly, T.J, Tanner, J.J.
Deposit date:2009-08-27
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.692 Å)
Cite:Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.
J.Mol.Biol., 394, 2009
3IT2
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BU of 3it2 by Molmil
Crystal structure of ligand-free Francisella tularensis histidine acid phosphatase
Descriptor: ACETATE ION, Acid phosphatase
Authors:Singh, H, Felts, R.L, Reilly, T.J, Tanner, J.J.
Deposit date:2009-08-27
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.838 Å)
Cite:Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.
J.Mol.Biol., 394, 2009
3HR4
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BU of 3hr4 by Molmil
Human iNOS Reductase and Calmodulin Complex
Descriptor: CALCIUM ION, Calmodulin, FLAVIN MONONUCLEOTIDE, ...
Authors:Xia, C, Misra, I, Iyanaki, T, Kim, J.J.K.
Deposit date:2009-06-08
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Regulation of Interdomain Interactions by CaM in Inducible Nitric Oxide Synthase
J.Biol.Chem., 2009
3FS7
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BU of 3fs7 by Molmil
Crystal structure of Gallus gallus beta-parvalbumin (avian thymic hormone)
Descriptor: CALCIUM ION, GLYCEROL, Parvalbumin, ...
Authors:Schuermann, J.P, Tanner, J.J, Henzl, M.T.
Deposit date:2009-01-09
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9539 Å)
Cite:Structure of avian thymic hormone, a high-affinity avian beta-parvalbumin, in the Ca2+-free and Ca2+-bound states.
J.Mol.Biol., 397, 2010
3FTH
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BU of 3fth by Molmil
NFLVHSS segment from Islet Amyloid Polypeptide (IAPP or Amylin)
Descriptor: NFLVHSS heptapeptide from Islet Amyloid Polypeptide, SULFATE ION
Authors:Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
Deposit date:2009-01-13
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Molecular mechanisms for protein-encoded inheritance
Nat.Struct.Mol.Biol., 16, 2009
3FRO
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BU of 3fro by Molmil
Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations
Descriptor: 1,5-anhydro-D-fructose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GlgA glycogen synthase, ...
Authors:Diaz, A, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2009-01-08
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lyase activity of glycogen synthase: Is an elimination/addition mechanism a possible reaction pathway for retaining glycosyltransferases?
IUBMB Life, 64, 2012
3I2F
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BU of 3i2f by Molmil
Cocaine Esterase with mutations T172R / G173Q, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
4US2
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BU of 4us2 by Molmil
The crystal structure of H-Ras and SOS in complex with ligands
Descriptor: 3-[(3R)-1-ethyl-2,5-dioxopyrrolidin-3-yl]benzamide, GTPASE HRAS, SON OF SEVENLESS HOMOLOG 1
Authors:Winter, J.J.G, Anderson, M, Blades, K, Brassington, C, Breeze, A.L, Chresta, C, Embrey, K, Fairley, G, Faulder, P, Finlay, M.R.V, Kettle, J.G, Nowak, T, Overman, R, Patel, S.J, Perkins, P, Spadola, L, Tart, J, Tucker, J, Wrigley, G.
Deposit date:2014-07-02
Release date:2015-03-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Small Molecule Binding Sites on the Ras:SOS Complex Can be Exploited for Inhibition of Ras Activation.
J.Med.Chem., 58, 2015

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