3GBI

The Rational Design and Structural Analysis of a Self-Assembled Three-Dimensional DNA Crystal

Summary for 3GBI

DescriptorDNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), DNA (5'-D(P*GP*GP*CP*TP*GP*C)-3'), ... (4 entities in total)
Functional Keywordsnanotechnology, dna crystals, dna crossover, designed crystal lattice, dna
Total number of polymer chains4
Total molecular weight12797.42
Authors
Birktoft, J.J.,Zheng, J.,Seeman, N.C. (deposition date: 2009-02-19, release date: 2009-09-01, Last modification date: 2017-11-01)
Primary citation
Zheng, J.,Birktoft, J.J.,Chen, Y.,Wang, T.,Sha, R.,Constantinou, P.E.,Ginell, S.L.,Mao, C.,Seeman, N.C.
From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal.
Nature, 461:74-77, 2009
PubMed: 19727196 (PDB entries with the same primary citation)
DOI: 10.1038/nature08274
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (4.018 Å)
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Structure validation

ClashscoreRSRZ outliers810MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3gbi
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Molmil generated image of 3gbi
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Molmil generated image of 3gbi
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 3gbi
no rotation
Molmil generated image of 3gbi
rotated about x axis by 90°
Molmil generated image of 3gbi
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3gbi.pdb1.gz [43.91 KB])