Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2408 results

1FWX
DownloadVisualize
BU of 1fwx by Molmil
CRYSTAL STRUCTURE OF NITROUS OXIDE REDUCTASE FROM P. DENITRIFICANS
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Brown, K, Djinovic-Carugo, K, Haltia, T, Cabrito, I, Saraste, M, Moura, J.J, Moura, I, Tegoni, M, Cambillau, C.
Deposit date:2000-09-25
Release date:2001-09-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Revisiting the Catalytic CuZ Cluster of Nitrous Oxide (N2O) Reductase. Evidence of a Bridging Inorganic Sulfur
J.Biol.Chem., 275, 2000
1GGQ
DownloadVisualize
BU of 1ggq by Molmil
OUTER SURFACE PROTEIN C (OSPC) OF BORRELIA BURGDORFERI STRAIN B31
Descriptor: MAGNESIUM ION, OUTER SURFACE PROTEIN C
Authors:Dunn, J.J, Lawson, C.L.
Deposit date:2000-09-14
Release date:2001-03-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi.
EMBO J., 20, 2001
1GTR
DownloadVisualize
BU of 1gtr by Molmil
STRUCTURAL BASIS OF ANTICODON LOOP RECOGNITION BY GLUTAMINYL-TRNA SYNTHETASE
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMINYL-tRNA SYNTHETASE, RNA (74-MER)
Authors:Rould, M.A, Perona, J.J, Steitz, T.A.
Deposit date:1993-09-15
Release date:1995-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase.
Nature, 352, 1991
1G88
DownloadVisualize
BU of 1g88 by Molmil
S4AFL3ARG515 MUTANT
Descriptor: SMAD4
Authors:Chako, B.M, Qin, B, Lam, S.S, Correia, J.J, Lin, K.
Deposit date:2000-11-16
Release date:2000-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:The L3 loop and C-terminal phosphorylation jointly define Smad protein trimerization.
Nat.Struct.Biol., 8, 2001
1HA0
DownloadVisualize
BU of 1ha0 by Molmil
HEMAGGLUTININ PRECURSOR HA0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (HEMAGGLUTININ PRECURSOR), alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, J, Ho Lee, K, Steinhauer, D.A, Stevens, D.J, Skehel, J.J, Wiley, D.C.
Deposit date:1998-10-08
Release date:1998-10-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the hemagglutinin precursor cleavage site, a determinant of influenza pathogenicity and the origin of the labile conformation.
Cell(Cambridge,Mass.), 95, 1998
1F1M
DownloadVisualize
BU of 1f1m by Molmil
CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN C (OSPC)
Descriptor: OUTER SURFACE PROTEIN C, ZINC ION
Authors:Kumaran, D, Eswaramoorthy, S, Dunn, J.J, Swaminathan, S.
Deposit date:2000-05-19
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi.
EMBO J., 20, 2001
1FR1
DownloadVisualize
BU of 1fr1 by Molmil
REFINED CRYSTAL STRUCTURE OF BETA-LACTAMASE FROM CITROBACTER FREUNDII INDICATES A MECHANISM FOR BETA-LACTAM HYDROLYSIS
Descriptor: BETA-LACTAMASE
Authors:Oefner, C, D'Arcy, A, Daly, J.J, Winkler, F.K.
Deposit date:2000-09-07
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined crystal structure of beta-lactamase from Citrobacter freundii indicates a mechanism for beta-lactam hydrolysis.
Nature, 343, 1990
1HCJ
DownloadVisualize
BU of 1hcj by Molmil
Photoproduct of the wild-type Aequorea victoria Green Fluorescent Protein
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Gensch, T, Hellingwerf, K.J, Johnson, L.
Deposit date:2001-05-04
Release date:2001-12-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phototransformation of Green Fluorescent Protein with Uv and Visible Light Leads to Decarboxylation of Glutamate 222
Nat.Struct.Biol., 9, 2002
1GVZ
DownloadVisualize
BU of 1gvz by Molmil
Prostate Specific Antigen (PSA) from stallion seminal plasma
Descriptor: ACETATE ION, GLYCEROL, KALLIKREIN-1E2
Authors:Carvalho, A.L, Sanz, L, Barettino, D, Romero, A, Calvete, J.J, Romao, M.J.
Deposit date:2002-02-28
Release date:2002-09-12
Last modified:2011-09-21
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal Structure of a Prostate Kallikrein Isolated from Stallion Seminal Plasma: A Homologue of Human Psa
J.Mol.Biol., 322, 2002
2LL0
DownloadVisualize
BU of 2ll0 by Molmil
NMR structure of the putative ATPase regulatory protein YP_916642.1 from Paracoccus denitrificans
Descriptor: Uncharacterized protein
Authors:Serrano, P, Geralt, M, Wuthrich, K, Morales-Rios, E, Zarco-Zavala, M, Garcia-Trejo, J.J, Dutta, S.K, Joint Center for Structural Genomics (JCSG)
Deposit date:2011-10-24
Release date:2011-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the putative ATPase regulatory protein YP_916642.1 from Paracoccus denitrificans
To be Published
5XBK
DownloadVisualize
BU of 5xbk by Molmil
Crystal structure of human Importin4
Descriptor: Importin-4, histone H3
Authors:Song, J.J, Yoon, J.
Deposit date:2017-03-20
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.223 Å)
Cite:Integrative Structural Investigation on the Architecture of Human Importin4_Histone H3/H4_Asf1a Complex and Its Histone H3 Tail Binding
J. Mol. Biol., 430, 2018
5KEK
DownloadVisualize
BU of 5kek by Molmil
Structure Determination of a Self-Assembling DNA Crystal
Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*T)-3'), ...
Authors:Simmons, C.R, Birktoft, J.J, Seeman, N.C, Yan, H.
Deposit date:2016-06-09
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Construction and Structure Determination of a Three-Dimensional DNA Crystal.
J.Am.Chem.Soc., 138, 2016
5KF6
DownloadVisualize
BU of 5kf6 by Molmil
Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
Descriptor: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Tanner, J.J.
Deposit date:2016-06-12
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function.
J.Biol.Chem., 291, 2016
6OL0
DownloadVisualize
BU of 6ol0 by Molmil
Structure of VcINDY bound to Malate
Descriptor: (2S)-2-hydroxybutanedioic acid, SODIUM ION, Transporter, ...
Authors:Sauer, D.B, Marden, J.J, Wang, D.N.
Deposit date:2019-04-15
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter
Biorxiv, 2022
5K8S
DownloadVisualize
BU of 5k8s by Molmil
cAMP bound PfPKA-R (297-441)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CAMP-dependent protein kinase regulatory subunit
Authors:Littler, D.R, Gilson, P.R, Crabb, B.S, Rossjohn, J.J.
Deposit date:2016-05-31
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Disrupting the Allosteric Interaction between the Plasmodium falciparum cAMP-dependent Kinase and Its Regulatory Subunit.
J. Biol. Chem., 291, 2016
5KEO
DownloadVisualize
BU of 5keo by Molmil
Structure Determination of a Self-Assembling DNA Crystal
Descriptor: CACODYLATE ION, DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*T)-3'), ...
Authors:Simmons, C.R, Birktoft, J.J, Seeman, N.C, Yan, H.
Deposit date:2016-06-09
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Construction and Structure Determination of a Three-Dimensional DNA Crystal.
J.Am.Chem.Soc., 138, 2016
6O5G
DownloadVisualize
BU of 6o5g by Molmil
Calmodulin in complex with isomalbrancheamide D
Descriptor: (5aS,12aS,13aS)-9-bromo-8-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7 ,6-b]carbazol-14-one, CALCIUM ION, Calmodulin-1, ...
Authors:Beyett, T.S, Fraley, A.E, Tesmer, J.J.G.
Deposit date:2019-03-02
Release date:2019-08-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Perturbation of the interactions of calmodulin with GRK5 using a natural product chemical probe.
Proc.Natl.Acad.Sci.USA, 116, 2019
2LQA
DownloadVisualize
BU of 2lqa by Molmil
Solution NMR structure of Asteropsin A from marine sponge Asteropus sp.
Descriptor: Asteropsin A
Authors:Li, H, Bowling, J.J, Hamann, M.T, Jung, J.H.
Deposit date:2012-02-28
Release date:2013-02-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Asteropsin A: An unusual cystine-crosslinked peptide from porifera enhances neuronal Ca(2+) influx
Biochim.Biophys.Acta, 1830, 2012
6ODB
DownloadVisualize
BU of 6odb by Molmil
Crystal structure of HDAC8 in complex with compound 3
Descriptor: GLYCEROL, Histone deacetylase 8, N-{2-[(1E)-3-(hydroxyamino)-3-oxoprop-1-en-1-yl]phenyl}-2-phenoxybenzamide, ...
Authors:Zheng, X, Conti, C, Caravella, J, Zablocki, M.-M, Bair, K, Barczak, N, Han, B, Lancia Jr, D, Liu, C, Martin, M, Ng, P.Y, Rudnitskaya, A, Thomason, J.J, Garcia-Dancey, R, Hardy, C, Lahdenranta, J, Leng, C, Li, P, Pardo, E, Saldahna, A, Tan, T, Toms, A.V, Yao, L, Zhang, C.
Deposit date:2019-03-26
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-based Discovery of Novel N-(E)-N-Hydroxy-3-(2-(2-oxoimidazolidin-1-yl)phenyl)acrylamides as Potent and Selective HDAC8 inhibitors
To Be Published
6O4C
DownloadVisualize
BU of 6o4c by Molmil
Structure of ALDH7A1 mutant W175A complexed with NAD
Descriptor: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde dehydrogenase, CHLORIDE ION, ...
Authors:Tanner, J.J, Korasick, D.A, Laciak, A.R.
Deposit date:2019-02-28
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and biochemical consequences of pyridoxine-dependent epilepsy mutations that target the aldehyde binding site of aldehyde dehydrogenase ALDH7A1.
Febs J., 287, 2020
6O4K
DownloadVisualize
BU of 6o4k by Molmil
Structure of ALDH7A1 mutant E399Q complexed with NAD
Descriptor: 1,2-ETHANEDIOL, Alpha-aminoadipic semialdehyde dehydrogenase, CHLORIDE ION, ...
Authors:Tanner, J.J, Korasick, D.A, Laciak, A.R.
Deposit date:2019-02-28
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural analysis of pathogenic mutations targeting Glu427 of ALDH7A1, the hot spot residue of pyridoxine-dependent epilepsy.
J. Inherit. Metab. Dis., 43, 2020
5KBZ
DownloadVisualize
BU of 5kbz by Molmil
Structure of the PksA Product Template domain in complex with a phosphopantetheine mimetic
Descriptor: (14R)-14-hydroxy-15,15-dimethyl-1-[5-({[(5-methyl-1,2-oxazol-3-yl)methyl]sulfanyl}methyl)-1,2-oxazol-3-yl]-4,9,13-trioxo-2-thia-5,8,12-triazahexadecan-16-yl dihydrogen phosphate, Noranthrone synthase
Authors:Tsai, S.C, Burkart, M.D, Townsend, C.A, Barajas, J.F, Shakya, G, Topper, C.L, Moreno, G, Jackson, D.R, Rivera, H, La Clair, J.J, Vagstad, A.
Deposit date:2016-06-03
Release date:2017-05-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Polyketide mimetics yield structural and mechanistic insights into product template domain function in nonreducing polyketide synthases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2LVJ
DownloadVisualize
BU of 2lvj by Molmil
solution structure of hemi-Mg-bound Phl p 7
Descriptor: MAGNESIUM ION, Polcalcin Phl p 7
Authors:Henzl, M.T, Tanner, J.J.
Deposit date:2012-07-05
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of polcalcin Phl p 7 in three ligation states: Apo-, hemi-Mg(2+) -bound, and fully Ca(2+) -bound.
Proteins, 81, 2013
6O4I
DownloadVisualize
BU of 6o4i by Molmil
Structure of ALDH7A1 mutant E399D complexed with alpha-aminoadipate
Descriptor: 1,2-ETHANEDIOL, 2-AMINOHEXANEDIOIC ACID, Alpha-aminoadipic semialdehyde dehydrogenase
Authors:Tanner, J.J, Korasick, D.A, Laciak, A.R.
Deposit date:2019-02-28
Release date:2019-11-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural analysis of pathogenic mutations targeting Glu427 of ALDH7A1, the hot spot residue of pyridoxine-dependent epilepsy.
J. Inherit. Metab. Dis., 43, 2020
6OL1
DownloadVisualize
BU of 6ol1 by Molmil
Structure of VcINDY in complex with Succinate
Descriptor: SODIUM ION, SUCCINIC ACID, Transporter, ...
Authors:Sauer, D.B, Marden, J.J, Wang, D.N.
Deposit date:2019-04-15
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.088 Å)
Cite:Elevator mechanism dynamics in a sodium-coupled dicarboxylate transporter
Biorxiv, 2022

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon