Structure Determination of a Self-Assembling DNA Crystal

Summary for 5KEO

DescriptorDNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(P*CP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*T)-3'), ... (5 entities in total)
Functional Keywordsstructural dna nanoechnology, self-assembled crystals, self-assembly, dna
Biological sourceEndothia gyrosa
Total number of polymer chains4
Total molecular weight13071.4
Simmons, C.R.,Birktoft, J.J.,Seeman, N.C.,Yan, H. (deposition date: 2016-06-09, release date: 2016-08-10, Last modification date: 2016-08-24)
Primary citation
Simmons, C.R.,Zhang, F.,Birktoft, J.J.,Qi, X.,Han, D.,Liu, Y.,Sha, R.,Abdallah, H.O.,Hernandez, C.,Ohayon, Y.P.,Seeman, N.C.,Yan, H.
Construction and Structure Determination of a Three-Dimensional DNA Crystal.
J.Am.Chem.Soc., 138:10047-10054, 2016
PubMed: 27447429 (PDB entries with the same primary citation)
DOI: 10.1021/jacs.6b06508
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRSRZ outliers0.273140MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5keo
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Molmil generated image of 5keo
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Molmil generated image of 5keo
rotated about y axis by 90°