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PDB: 2408 件

2O1T
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Structure of Middle plus C-terminal domains (M+C) of GRP94
分子名称: Endoplasmin
著者Dollins, D.E, Warren, J.J, Immormino, R.M, Gewirth, D.T.
登録日2006-11-29
公開日2007-10-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of GRP94-Nucleotide Complexes Reveal Mechanistic Differences between the hsp90 Chaperones.
Mol.Cell, 28, 2007
6QBT
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BU of 6qbt by Molmil
Structure of the HTLV-2 integrase catalytic core domain in complex with magnesium (trimeric form)
分子名称: HTLV-2 integrase catalytic core domain, MAGNESIUM ION
著者Barski, M.S, Minnell, J.J, Maertens, G.N.
登録日2018-12-21
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56 gamma.
Nat Commun, 11, 2020
6PU1
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Cysteine stabilized hexameric HIV-1 CA in complex with SEC24C peptide
分子名称: CHLORIDE ION, Gag polyprotein, IODIDE ION, ...
著者Lindenberger, J.J, Kvaratskhelia, M.
登録日2019-07-16
公開日2021-01-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Cysteine stabilized hexameric HIV-1 CA in complex with SEC24C peptide
To Be Published
2O8O
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Crystal structure of Clostridium histolyticum colg collagenase collagen-binding domain 3B at 1.35 Angstrom resolution in presence of calcium
分子名称: CALCIUM ION, CHLORIDE ION, Collagenase
著者Philominathan, S.T.L, Wilson, J.J, Matsushita, O, Sakon, J.
登録日2006-12-12
公開日2007-12-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Induction of stable beta-sheet by Ca2+ in Clostridial collagen binding domain
To be Published
2NRW
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BU of 2nrw by Molmil
Crystal structure of the C terminal half of UvrC
分子名称: UvrABC system protein C
著者Karakas, E, Truglio, J.J, Kisker, C.
登録日2006-11-02
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad.
Embo J., 26, 2007
5W93
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p130Cas complex with paxillin LD1
分子名称: Breast cancer anti-estrogen resistance protein 1, Paxillin
著者Miller, D.J, Zheng, J.J.
登録日2017-06-22
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural and functional insights into the interaction between the Cas family scaffolding protein p130Cas and the focal adhesion-associated protein paxillin.
J. Biol. Chem., 292, 2017
2O1V
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Structure of full length GRP94 with ADP bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, Endoplasmin, MAGNESIUM ION
著者Dollins, D.E, Warren, J.J, Immormino, R.M, Gewirth, D.T.
登録日2006-11-29
公開日2007-10-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of GRP94-Nucleotide Complexes Reveal Mechanistic Differences between the hsp90 Chaperones.
Mol.Cell, 28, 2007
6QJO
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DNA containing both right- and left-handed parallel-stranded G-quadruplexes
分子名称: DNA (28-MER), POTASSIUM ION
著者Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2019-01-24
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
5W7K
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Crystal structure of OxaG
分子名称: CHLORIDE ION, OxaG, S-ADENOSYL-L-HOMOCYSTEINE
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5W7S
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Crystal structure of OxaC in complex with sinefungin and meleagrin
分子名称: (3E,7aR,12aS)-6-hydroxy-3-[(1H-imidazol-4-yl)methylidene]-12-methoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, SINEFUNGIN
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.948 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5W8T
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BU of 5w8t by Molmil
Crystal structure of MERS-CoV papain-like protease in complex with the C-terminal domain of human ISG15
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ORF1ab, Ubiquitin-like protein ISG15, ...
著者Daczkowski, C.M, Goodwin, O.Y, Dzimianski, J.V, Farhat, J.J, Pegan, S.D.
登録日2017-06-22
公開日2017-09-27
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.758 Å)
主引用文献Structurally Guided Removal of DeISGylase Biochemical Activity from Papain-Like Protease Originating from Middle East Respiratory Syndrome Coronavirus.
J. Virol., 91, 2017
5W7R
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BU of 5w7r by Molmil
Crystal structure of OxaC in complex with SAH and oxaline
分子名称: (3E,7aR,12aS)-3-[(1H-imidazol-4-yl)methylidene]-6,12-dimethoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1 ',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, S-ADENOSYL-L-HOMOCYSTEINE
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-07-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5M11
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BU of 5m11 by Molmil
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
分子名称: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Lasica, A.M, Goulas, T, Mizgalska, D, Zhou, X, Ksiazek, M, Madej, M, Guo, Y, Guevara, T, Nowak, M, Potempa, B, Goel, A, Sztukowska, M, Prabhakar, A.T, Bzowska, M, Widziolek, M, Thogersen, I.B, Enghild, J.J, Simonian, M, Kulczyk, A.W, Nguyen, K.-A, Potempa, J, Gomis-Ruth, F.X.
登録日2016-10-07
公開日2016-11-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Sci Rep, 6, 2016
2P4K
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BU of 2p4k by Molmil
Contribution to Structure and Catalysis of Tyrosine 34 in Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, Superoxide dismutase
著者Perry, J.J.
登録日2007-03-12
公開日2007-04-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Contribution of human manganese superoxide dismutase tyrosine 34 to structure and catalysis.
Biochemistry, 48, 2009
2OZN
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BU of 2ozn by Molmil
The Cohesin-Dockerin Complex of NagJ and NagH from Clostridium perfringens
分子名称: CALCIUM ION, CHLORIDE ION, Hyalurononglucosaminidase, ...
著者Adams, J.J, Boraston, A, Smith, S.P.
登録日2007-02-26
公開日2008-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis of Clostridium perfringens toxin complex formation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5MJV
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Rebuild and re-refined model for Human Parechovirus 1
分子名称: CAPSID SUBUNIT VP0, CAPSID SUBUNIT VP1, CAPSID SUBUNIT VP3, ...
著者Shakeel, S, Dykeman, E.C, White, S.J, Ora, A, Cockburn, J.J.B, Butcher, S.J, Stockley, P.G, Twarock, R.
登録日2016-12-01
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Genomic RNA folding mediates assembly of human parechovirus.
Nat Commun, 8, 2017
2OT5
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Crystal structure of the HIV gp41 core with the enfuvirtide resistance mutation N43D
分子名称: HIV-1 gp41 glycoprotein
著者Bai, X, Seedorff, J.E, Green, J, Dwyer, J.J.
登録日2007-02-07
公開日2008-06-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Impact of the enfuvirtide resistance mutation N43D and the associated baseline polymorphism E137K on peptide sensitivity and six-helix bundle structure.
Biochemistry, 47, 2008
6QK2
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BU of 6qk2 by Molmil
R2-like ligand-binding oxidase Y715F mutant with anaerobically reconstituted Mn/Fe cofactor
分子名称: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
著者Griese, J.J, Hogbom, M.
登録日2019-01-28
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.596 Å)
主引用文献Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020
2P4L
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Structure and sodium channel activity of an excitatory I1-superfamily conotoxin
分子名称: I-superfamily conotoxin r11a
著者Buczek, O, Wei, D.X, Babon, J.J, Yang, X.D, Fiedler, B, Yoshikami, D, Olivera, B.M, Bulaj, G, Norton, R.S.
登録日2007-03-12
公開日2007-09-25
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure and Sodium Channel Activity of an Excitatory I(1)-Superfamily Conotoxin
Biochemistry, 46, 2007
5Z2H
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BU of 5z2h by Molmil
Structure of Dictyostelium discoideum mitochondrial calcium uniporter N-terminal domain(DdMCU-NTD)
分子名称: Dictyostelium discoideum mitochondrial calcium uniporter
著者Yuan, Y, Wen, M, Chou, J.J, Li, D, Bo, O.
登録日2018-01-02
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.674 Å)
主引用文献Structural Characterization of the N-Terminal Domain of theDictyostelium discoideumMitochondrial Calcium Uniporter.
Acs Omega, 5, 2020
6QK0
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R2-like ligand-binding oxidase E69D mutant with anaerobically reconstituted Mn/Fe cofactor
分子名称: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ...
著者Griese, J.J, Hogbom, M.
登録日2019-01-28
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020
2NRT
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Crystal structure of the C-terminal half of UvrC
分子名称: CHLORIDE ION, UvrABC system protein C
著者Karakas, E, Truglio, J.J, Kisker, C.
登録日2006-11-02
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad.
Embo J., 26, 2007
5M5C
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Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
分子名称: Calmodulin-regulated spectrin-associated protein 1, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Akhmanova, A, Moores, C.A, Baldus, M, Steinmetz, M.O, Topf, M, Roberts, A.J, Grant, B.J, Scarabelli, G, Joseph, A.-P, van Hooff, J.J.E, Houben, K, Hua, S, Luo, Y, Stangier, M.M, Jiang, K, Atherton, J.
登録日2016-10-21
公開日2017-10-04
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.
Nat. Struct. Mol. Biol., 24, 2017
5M50
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Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
分子名称: Calmodulin-regulated spectrin-associated protein 3, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Akhmanova, A, Moores, C.A, Baldus, M, Steinmetz, M.O, Topf, M, Roberts, A.J, Grant, B.J, Scarabelli, G, Joseph, A.-P, van Hooff, J.J.E, Houben, K, Hua, S, Luo, Y, Stangier, M.M, Jiang, K, Atherton, J.
登録日2016-10-20
公開日2017-10-04
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献A structural model for microtubule minus-end recognition and protection by CAMSAP proteins.
Nat. Struct. Mol. Biol., 24, 2017
6QK1
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R2-like ligand-binding oxidase Y175F mutant with aerobically reconstituted Mn/Fe cofactor
分子名称: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
著者Griese, J.J, Hogbom, M.
登録日2019-01-28
公開日2020-02-19
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.754 Å)
主引用文献Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020

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