Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2408 results

1M76
DownloadVisualize
BU of 1m76 by Molmil
Crystal Structure of the S137C Mutant of L-3-HYDROXYACYL-COA Dehydrogenase in Complex with NAD and Acetoacetyl-COA
Descriptor: 3-HYDROXYACYL-COA DEHYDROGENASE, ACETOACETYL-COENZYME A, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Barycki, J.J, Banaszak, L.J.
Deposit date:2002-07-18
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of the S137C Mutant of L-3-Hydroxyacyl-COA Dehydrogenase in Complex with NAD and Acetoacetyl-COA
To be Published
1MD9
DownloadVisualize
BU of 1md9 by Molmil
CRYSTAL STRUCTURE OF DhbE IN COMPLEX WITH DHB AND AMP
Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, 2,3-dihydroxybenzoate-AMP ligase, ADENOSINE MONOPHOSPHATE
Authors:May, J.J, Kessler, N, Marahiel, M.A, Stubbs, M.T.
Deposit date:2002-08-07
Release date:2002-09-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases.
Proc.Natl.Acad.Sci.USA, 99, 2002
1MPX
DownloadVisualize
BU of 1mpx by Molmil
ALPHA-AMINO ACID ESTER HYDROLASE LABELED WITH SELENOMETHIONINE
Descriptor: CALCIUM ION, GLYCEROL, alpha-amino acid ester hydrolase
Authors:Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Hensgens, C.M.H, de Vries, E.J, Janssen, D.B, Dijkstra, B.W.
Deposit date:2002-09-13
Release date:2003-04-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The sequence and crystal structure of the alpha-amino acid ester hydrolase from Xanthomonas citri define a new family of beta-lactam antibiotic acylases.
J.Biol.Chem., 278, 2003
1MLD
DownloadVisualize
BU of 1mld by Molmil
REFINED STRUCTURE OF MITOCHONDRIAL MALATE DEHYDROGENASE FROM PORCINE HEART AND THE CONSENSUS STRUCTURE FOR DICARBOXYLIC ACID OXIDOREDUCTASES
Descriptor: CITRIC ACID, MALATE DEHYDROGENASE
Authors:Gleason, W.B, Fu, Z, Birktoft, J.J, Banaszak, L.J.
Deposit date:1994-01-24
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Refined crystal structure of mitochondrial malate dehydrogenase from porcine heart and the consensus structure for dicarboxylic acid oxidoreductases.
Biochemistry, 33, 1994
2RBF
DownloadVisualize
BU of 2rbf by Molmil
Structure of the ribbon-helix-helix domain of Escherichia coli PutA (PutA52) complexed with operator DNA (O2)
Descriptor: Bifunctional protein putA, DNA (5'-D(*DTP*DT*DTP*DGP*DCP*DGP*DGP*DTP*DTP*DGP*DCP*DAP*DCP*DCP*DTP*DTP*DTP*DCP*DAP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DTP*DGP*DAP*DAP*DAP*DGP*DGP*DTP*DGP*DCP*DAP*DAP*DCP*DCP*DGP*DCP*DAP*DAP*DA)-3')
Authors:Tanner, J.J.
Deposit date:2007-09-18
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of the transcriptional regulation of the proline utilization regulon by multifunctional PutA.
J.Mol.Biol., 381, 2008
8PD0
DownloadVisualize
BU of 8pd0 by Molmil
cryo-EM structure of Doa10 in MSP1E3D1
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, ERAD-associated E3 ubiquitin-protein ligase DOA10
Authors:Botsch, J.J, Braeuning, B, Schulman, B.A.
Deposit date:2023-06-11
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Doa10/MARCH6 architecture interconnects E3 ligase activity with lipid-binding transmembrane channel to regulate SQLE.
Nat Commun, 15, 2024
8PDA
DownloadVisualize
BU of 8pda by Molmil
cryo-EM structure of Doa10 with RING domain in MSP1E3D1
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, ERAD-associated E3 ubiquitin-protein ligase DOA10
Authors:Botsch, J.J, Braeuning, B, Schulman, B.A.
Deposit date:2023-06-12
Release date:2024-01-17
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Doa10/MARCH6 architecture interconnects E3 ligase activity with lipid-binding transmembrane channel to regulate SQLE.
Nat Commun, 15, 2024
1M6O
DownloadVisualize
BU of 1m6o by Molmil
Crystal Structure of HLA B*4402 in complex with HLA DPA*0201 peptide
Descriptor: Beta-2-microglobulin, HLA DPA*0201 peptide, HLA class I histocompatibility antigen, ...
Authors:Macdonald, W.A, Purcell, A.W, Williams, D.S, Mifsud, N.A, Ely, L.K, Gorman, J.J, Clements, C.S, Kjer-Nielsen, L, Koelle, D.M, Brooks, A.G, Lovrecz, G.O, Lu, L, Rossjohn, J, McCluskey, J.
Deposit date:2002-07-17
Release date:2003-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A naturally selected dimorphism within the HLA-B44 supertype alters class I structure, peptide repertoire, and T cell recognition.
J.Exp.Med., 198, 2003
1MIT
DownloadVisualize
BU of 1mit by Molmil
RECOMBINANT CUCURBITA MAXIMA TRYPSIN INHIBITOR V (RCMTI-V) (NMR, MINIMIZED AVERAGE STRUCTURE)
Descriptor: TRYPSIN INHIBITOR V
Authors:Cai, M, Gong, Y, Huang, Y, Liu, J, Prakash, O, Wen, L, Wen, J.J, Huang, J.-K, Krishnamoorthi, R.
Deposit date:1995-10-26
Release date:1996-04-03
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of recombinant Cucurbita maxima trypsin inhibitor-V determined by NMR spectroscopy.
Biochemistry, 35, 1996
7KAA
DownloadVisualize
BU of 7kaa by Molmil
NMR solution structures of tirasemtiv drug bound to a fast skeletal troponin C-troponin I complex
Descriptor: 6-ethynyl-1-(pentan-3-yl)-1H-imidazo[4,5-b]pyrazin-2-ol, CALCIUM ION, Troponin C, ...
Authors:Mercier, P, Li, M.X, Hartman, J.J, Sykes, B.D.
Deposit date:2020-09-30
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of Tirasemtiv Activation of Fast Skeletal Muscle.
J.Med.Chem., 64, 2021
1M6P
DownloadVisualize
BU of 1m6p by Molmil
EXTRACYTOPLASMIC DOMAIN OF BOVINE CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR, MANGANESE (II) ION
Authors:Roberts, D.L, Weix, D.J, Dahms, N.M, Kim, J.J.-P.
Deposit date:1998-04-19
Release date:1999-04-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of lysosomal enzyme recognition: three-dimensional structure of the cation-dependent mannose 6-phosphate receptor.
Cell(Cambridge,Mass.), 93, 1998
7JVE
DownloadVisualize
BU of 7jve by Molmil
Crystal structure of Salmonella enterica Typhimurium BcfH
Descriptor: 1,2-ETHANEDIOL, DsbA family protein, MAGNESIUM ION, ...
Authors:Subedi, P, Heras, B, Hor, L, Paxman, J.J.
Deposit date:2020-08-21
Release date:2021-04-21
Last modified:2021-06-23
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Salmonella enterica BcfH Is a Trimeric Thioredoxin-Like Bifunctional Enzyme with Both Thiol Oxidase and Disulfide Isomerase Activities.
Antioxid.Redox Signal., 35, 2021
1MJS
DownloadVisualize
BU of 1mjs by Molmil
MH2 domain of transcriptional factor SMAD3
Descriptor: SMAD 3
Authors:Qin, B.Y, Lam, S.S, Correia, J.J, Lin, K.
Deposit date:2002-08-28
Release date:2002-10-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Smad3 allostery links TGF-beta receptor kinase activation to transcriptional control
Genes Dev., 16, 2002
1MHI
DownloadVisualize
BU of 1mhi by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF AN INSULIN DIMER. A STUDY OF THE B9(ASP) MUTANT OF HUMAN INSULIN USING NUCLEAR MAGNETIC RESONANCE DISTANCE GEOMETRY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor: INSULIN
Authors:Jorgensen, A.M.M, Kristensen, S.M, Led, J.J, Balschmidt, P.
Deposit date:1994-11-30
Release date:1995-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of an insulin dimer. A study of the B9(Asp) mutant of human insulin using nuclear magnetic resonance, distance geometry and restrained molecular dynamics.
J.Mol.Biol., 227, 1992
8OQ2
DownloadVisualize
BU of 8oq2 by Molmil
Binding of NADP to a formate dehydrogenase from Starkeya novella.
Descriptor: AZIDE ION, Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Partipilo, M, Whittaker, J.J, Pontillo, N, Guskov, A, Slotboom, D.J.
Deposit date:2023-04-10
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Binding of NADP to a formate dehydrogenase from Starkeya novella.
To Be Published
2R80
DownloadVisualize
BU of 2r80 by Molmil
Pigeon Hemoglobin (OXY form)
Descriptor: Hemoglobin subunit alpha-A, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Ponnuswamy, M.N, Packianathan, C, Sundaresan, S, Neelagandan, K, Palani, K, Muller, J.J, Heinemann, U.
Deposit date:2007-09-10
Release date:2008-09-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:X-ray crystal structure analysis of Hemolgobin from Pigeon (Columba Livia) at 1.44 angstrom
To be Published
1M1Q
DownloadVisualize
BU of 1m1q by Molmil
P222 oxidized structure of the tetraheme cytochrome c from Shewanella oneidensis MR1
Descriptor: HEME C, SULFATE ION, small tetraheme cytochrome c
Authors:Leys, D, Meyer, T.E, Tsapin, A.I, Nealson, K.H, Cusanovich, M.A, Van Beeumen, J.J.
Deposit date:2002-06-20
Release date:2002-08-14
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c
J.Biol.Chem., 277, 2002
2RLF
DownloadVisualize
BU of 2rlf by Molmil
Proton Channel M2 from Influenza A in complex with inhibitor rimantadine
Descriptor: Matrix protein 2, RIMANTADINE
Authors:Chou, J.J, Schnell, J.R.
Deposit date:2007-07-11
Release date:2008-01-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and mechanism of the M2 proton channel of influenza A virus.
Nature, 451, 2008
2R83
DownloadVisualize
BU of 2r83 by Molmil
Crystal structure analysis of human synaptotagmin 1 C2A-C2B
Descriptor: CHLORIDE ION, Synaptotagmin-1
Authors:Sutton, R.B, Fuson, K.L, Montes, M, Robert, J.J.
Deposit date:2007-09-10
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of human synaptotagmin 1 C2AB in the absence of Ca2+ reveals a novel domain association.
Biochemistry, 46, 2007
2TPS
DownloadVisualize
BU of 2tps by Molmil
THIAMIN PHOSPHATE SYNTHASE
Descriptor: MAGNESIUM ION, PROTEIN (THIAMIN PHOSPHATE SYNTHASE), PYROPHOSPHATE 2-, ...
Authors:Chiu, H.-J, Reddick, J.J, Begley, T.P, Ealick, S.E.
Deposit date:1999-03-09
Release date:1999-03-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of thiamin phosphate synthase from Bacillus subtilis at 1.25 A resolution.
Biochemistry, 38, 1999
8P3C
DownloadVisualize
BU of 8p3c by Molmil
Full length structure of BpMIP with bound inhibitor NJS227.
Descriptor: (2~{S})-1-[(4-fluorophenyl)methylsulfonyl]-~{N}-[(2~{S})-3-(4-fluorophenyl)-1-oxidanylidene-1-(pyridin-3-ylmethylamino)propan-2-yl]piperidine-2-carboxamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Whittaker, J.J, Guskov, A, Goretzki, B, Hellmich, U.A.
Deposit date:2023-05-17
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural dynamics of macrophage infectivity potentiator proteins (MIPs) are differentially modulated by inhibitors and appendage domains
To Be Published
8P3D
DownloadVisualize
BU of 8p3d by Molmil
Full length structure of TcMIP with bound inhibitor NJS224.
Descriptor: (2~{S})-1-[(4-fluorophenyl)methylsulfonyl]-~{N}-[(2~{S})-4-methyl-1-oxidanylidene-1-(pyridin-3-ylmethylamino)pentan-2-yl]piperidine-2-carboxamide, SODIUM ION, peptidylprolyl isomerase
Authors:Whittaker, J.J, Guskov, A, Goretzki, B, Hellmich, U.A.
Deposit date:2023-05-17
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural dynamics of macrophage infectivity potentiator proteins (MIPs) are differentially modulated by inhibitors and appendage domains
To Be Published
8P42
DownloadVisualize
BU of 8p42 by Molmil
Full length structure of TcMIP with bound inhibitor NJS227.
Descriptor: (2~{S})-1-[(4-fluorophenyl)methylsulfonyl]-~{N}-[(2~{S})-3-(4-fluorophenyl)-1-oxidanylidene-1-(pyridin-3-ylmethylamino)propan-2-yl]piperidine-2-carboxamide, DI(HYDROXYETHYL)ETHER, Macrophage infectivity potentiator
Authors:Whittaker, J.J, Guskov, A, Goretzki, B, Hellmich, U.A.
Deposit date:2023-05-19
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural dynamics of macrophage infectivity potentiator proteins (MIPs) are differentially modulated by inhibitors and appendage domains
To Be Published
7L0R
DownloadVisualize
BU of 7l0r by Molmil
Structure of NTS-NTSR1-Gi complex in lipid nanodisc, noncanonical state, without AHD
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Zhang, M, Gui, M, Wang, Z, Gorgulla, C, Yu, J.J, Wu, H, Sun, Z, Klenk, C, Merklinger, L, Morstein, L, Hagn, F, Pluckthun, A, Brown, A, Nasr, M.L, Wagner, G.
Deposit date:2020-12-12
Release date:2021-01-06
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of an activated GPCR-G protein complex in lipid nanodiscs.
Nat.Struct.Mol.Biol., 28, 2021
7L0Q
DownloadVisualize
BU of 7l0q by Molmil
Structure of NTS-NTSR1-Gi complex in lipid nanodisc, canonical state, with AHD
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Zhang, M, Gui, M, Wang, Z, Gorgulla, C, Yu, J.J, Wu, H, Sun, Z, Klenk, C, Merklinger, L, Morstein, L, Hagn, F, Pluckthun, A, Brown, A, Nasr, M.L, Wagner, G.
Deposit date:2020-12-12
Release date:2021-01-06
Last modified:2021-03-31
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structure of an activated GPCR-G protein complex in lipid nanodiscs.
Nat.Struct.Mol.Biol., 28, 2021

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon