Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6634 件

2XBA
DownloadVisualize
BU of 2xba by Molmil
Structure of Human Anaplastic Lymphoma Kinase in complex with PHA- E429
分子名称: 5-[(2R)-2-hydroxy-2-phenylacetyl]-3-({[4-(4-methylpiperazin-1-yl)phenyl]carbonyl}amino)-1,6-dihydropyrrolo[3,4-c]pyrazol-5-ium, ALK TYROSINE KINASE RECEPTOR
著者Bossi, R.T, Saccardo, M.B, Ardini, E, Menichincheri, M, Rusconi, L, Magnaghi, P, Orsini, P, Fogliatto, G, Bertrand, J.A.
登録日2010-04-08
公開日2010-07-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structures of Anaplastic Lymphoma Kinase in Complex with ATP Competitive Inhibitors.
Biochemistry, 49, 2010
2XCF
DownloadVisualize
BU of 2xcf by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
分子名称: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
著者Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
登録日2010-04-22
公開日2010-06-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
192D
DownloadVisualize
BU of 192d by Molmil
RECOMBINATION-LIKE STRUCTURE OF D(CCGCGG)
分子名称: DNA (5'-D(*CP*CP*GP*CP*GP*G)-3'), SODIUM ION
著者Malinina, L, Urpi, L, Salas, X, Huynh-Dinh, T, Subirana, J.A.
登録日1994-09-22
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Recombination-like structure of d(CCGCGG).
J.Mol.Biol., 243, 1994
4C98
DownloadVisualize
BU of 4c98 by Molmil
Thermus thermophilus Cas6 (TTHB231)
分子名称: CAS6B, ZINC ION
著者Jinek, M, Niewoehner, O, Doudna, J.A.
登録日2013-10-02
公開日2013-11-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Evolution of Crispr RNA Recognition and Processing by Cas6 Endonucleases.
Nucleic Acids Res., 42, 2014
4CAE
DownloadVisualize
BU of 4cae by Molmil
Plasmodium vivax N-myristoyltransferase in complex with a benzothiophene inhibitor (compound 20b)
分子名称: 2-oxopentadecyl-CoA, 4-[(2-{5-[(3-METHOXYPHENYL)METHYL]-1,3,4-OXADIAZOL-2-YL}-1-BENZOTHIOPHEN-3-YL)OXY]PIPERIDINE, CHLORIDE ION, ...
著者Rackham, M.D, Brannigan, J.A, Rangachari, K, Wilkinson, A.J, Holder, A.A, Tate, E.W, Leatherbarrow, R.J.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Design and Synthesis of High Affinity Inhibitors of Plasmodium Falciparum and Plasmodium Vivax N-Myristoyltransferases Directed by Ligand Efficiency Dependent Lipophilicity (Lelp).
J.Med.Chem., 57, 2014
1Q41
DownloadVisualize
BU of 1q41 by Molmil
GSK-3 Beta complexed with Indirubin-3'-monoxime
分子名称: (Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME, GLYCOGEN SYNTHASE KINASE-3 BETA
著者Bertrand, J.A, Thieffine, S, Vulpetti, A, Cristiani, C, Valsasina, B, Knapp, S, Kalisz, H.M, Flocco, M.
登録日2003-08-01
公開日2003-10-21
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Characterization of the Gsk-3Beta Active Site Using Selective and Non-selective ATP-Mimetic Inhibitors
J.Mol.Biol., 333, 2003
1Y5Y
DownloadVisualize
BU of 1y5y by Molmil
Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
分子名称: CALCIUM ION, Formaldehyde-activating enzyme fae, SODIUM ION
著者Acharya, P, Goenrich, M, Hagemeier, C.H, Demmer, U, Vorholt, J.A, Thauer, R.K, Ermler, U.
登録日2004-12-03
公開日2005-01-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献How an enzyme binds the C1-carrier tetrahydromethanopterin: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
J.Biol.Chem., 280, 2005
2XIC
DownloadVisualize
BU of 2xic by Molmil
Pilus-presented adhesin, Spy0125 (Cpa), P212121 form (ESRF data)
分子名称: ANCILLARY PROTEIN 1
著者Pointon, J.A, Smith, W.D, Saalbach, G, Crow, A, Kehoe, M.A, Banfield, M.J.
登録日2010-06-28
公開日2010-08-04
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Highly Unusual Thioester Bond in a Pilus Adhesin is Required for Efficient Host Cell Interaction
J.Biol.Chem., 285, 2010
2XCL
DownloadVisualize
BU of 2xcl by Molmil
Nucleotide-bound Structures of Bacillus subtilis Glycinamide Ribonucleotide Synthetase
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PHOSPHORIBOSYLAMINE--GLYCINE LIGASE
著者Bertrand, J.A, Chen, S, Zalkin, H, Smith, J.L.
登録日2010-04-23
公開日2011-03-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Nucleotide-Bound Structures of Bacillus Subtilis Glycinamide Ribonucleotide Synthetase
To be Published
4CFO
DownloadVisualize
BU of 4cfo by Molmil
Structure of Lytic Transglycosylase MltC from Escherichia coli in complex with tetrasaccharide at 2.9 A resolution.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(2R)-1-amino-1-oxopropan-2-yl]-2-deoxy-beta-D-glucopyranoside, MLTC
著者Artola-Recolons, C, Bernardo-Garcia, N, Mobashery, S, Hermoso, J.A.
登録日2013-11-19
公開日2014-07-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and Cell Wall Cleavage by Modular Lytic Transglycosylase Mltc of Escherichia Coli.
Acs Chem.Biol., 9, 2014
2XM3
DownloadVisualize
BU of 2xm3 by Molmil
Deinococcus radiodurans ISDra2 Transposase Left end DNA complex
分子名称: 5'-D(*TP*TP*AP*GP*T)-3', ACETATE ION, DRA2 TRANSPOSASE BINDING ELEMENT, ...
著者Hickman, A.B, James, J.A, Barabas, O, Pasternak, C, Ton-Hoang, B, Chandler, M, Sommer, S, Dyda, F.
登録日2010-07-22
公開日2010-10-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA Recognition and the Precleavage State During Single-Stranded DNA Transposition in D. Radiodurans.
Embo J., 29, 2010
4CF4
DownloadVisualize
BU of 4cf4 by Molmil
Mutagenesis of a Rhodobacteraceae L-haloacid dehalogenase
分子名称: L-HALOACID DEHALOGENASE
著者Novak, H.R, Sayer, C, Isupov, M.N, Littlechild, J.A.
登録日2013-11-13
公開日2014-11-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Mutagenesis of a Rhodobacteraceae L-Haloacid Dehalogenase
To be Published
1PRM
DownloadVisualize
BU of 1prm by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
分子名称: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND PLR1 (AFAPPLPRR)
著者Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
登録日1994-10-10
公開日1995-02-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
1PRL
DownloadVisualize
BU of 1prl by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
分子名称: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND PLR1 (AFAPPLPRR)
著者Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
登録日1994-10-10
公開日1995-02-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
4BXD
DownloadVisualize
BU of 4bxd by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, AMPDH3, PEPTIDE, ...
著者Artola-Recolons, C, Hermoso, J.A.
登録日2013-07-10
公開日2013-10-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
2UUK
DownloadVisualize
BU of 2uuk by Molmil
Thrombin-hirugen-gw420128 ternary complex at 1.39A resolution
分子名称: CALCIUM ION, HIRUDIN I, HUMAN ALPHA THROMBIN, ...
著者Ahmed, H.U, Blakeley, M.P, Cianci, M, Cruickshank, D.W.J, Hubbard, J.A, Helliwell, J.R.
登録日2007-03-03
公開日2007-09-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献The Determination of Protonation States in Proteins.
Acta Crystallogr.,Sect.D, 63, 2007
1YI0
DownloadVisualize
BU of 1yi0 by Molmil
Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide, Sulfometuron methyl
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Acetolactate synthase, ETHYL DIHYDROGEN DIPHOSPHATE, ...
著者McCourt, J.A, Pang, S.S, King-Scott, J, Guddat, L.W, Duggleby, R.G.
登録日2005-01-10
公開日2006-01-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Herbicide-binding sites revealed in the structure of plant acetohydroxyacid synthase
Proc.Natl.Acad.Sci.Usa, 103, 2006
1DGB
DownloadVisualize
BU of 1dgb by Molmil
HUMAN ERYTHROCYTE CATALASE
分子名称: CATALASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Putnam, C.D, Arvai, A.S, Bourne, Y, Tainer, J.A.
登録日1999-11-23
公開日2000-02-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism.
J.Mol.Biol., 296, 2000
4BXJ
DownloadVisualize
BU of 4bxj by Molmil
CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA
分子名称: AMPDH3, GLYCEROL
著者Carrasco-Lopez, C, Hermoso, J.A.
登録日2013-07-12
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cell-Wall Remodeling by the Zinc-Protease Ampdh3 from Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
2UWL
DownloadVisualize
BU of 2uwl by Molmil
Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa
分子名称: 2-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}ETHENESULFONAMIDE, COAGULATION FACTOR X
著者Young, R.J, Brown, D, Burns-Kurtis, C.L, Chan, C, Convery, M.A, Hubbard, J.A, Kelly, H.A, Pateman, A.J, Patikis, A, Senger, S, Shah, G.P, Toomey, J.R, Watson, N.S, Zhou, P.
登録日2007-03-22
公開日2007-04-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa.
Bioorg.Med.Chem.Lett., 17, 2007
4CAJ
DownloadVisualize
BU of 4caj by Molmil
Crystallographic structure of the mouse SIGN-R1 CRD domain in complex with sialic acid
分子名称: CALCIUM ION, CD209 ANTIGEN-LIKE PROTEIN B, CHLORIDE ION, ...
著者Silva-Martin, N, Bartual, S.G, Hermoso, J.A.
登録日2013-10-08
公開日2014-10-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.191 Å)
主引用文献Structural Basis for Selective Recognition of Endogenous and Microbial Polysaccharides by Macrophage Receptor Sign-R1
Structure, 22, 2014
1PJR
DownloadVisualize
BU of 1pjr by Molmil
STRUCTURE OF DNA HELICASE
分子名称: PCRA
著者Subramanya, H.S, Bird, L.E, Brannigan, J.A, Wigley, D.B.
登録日1996-10-11
公開日1997-12-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a DExx box DNA helicase.
Nature, 384, 1996
4BPA
DownloadVisualize
BU of 4bpa by Molmil
Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with NAG-NAM-NAG-NAM tetrasaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, AMPDH2, ZINC ION
著者Artola-Recolons, C, Martinez-Caballero, S, Lee, M, Carrasco-Lopez, C, Hesek, D, Spink, E, Lastochkin, E, Zhang, W, Hellman, L, Boggess, B, Mobashery, S, Hermoso, J.A.
登録日2013-05-23
公開日2013-07-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Reaction Products and the X-Ray Structure of Ampdh2, a Virulence Determinant of Pseudomonas Aeruginosa.
J.Am.Chem.Soc., 135, 2013
4CAF
DownloadVisualize
BU of 4caf by Molmil
Plasmodium vivax N-myristoyltransferase in complex with a benzothiophene inhibitor (compound 34a)
分子名称: 2-oxopentadecyl-CoA, 4-[(2-{5-[(3,5-dimethyl-1H-pyrazol-4-yl)methyl]-1,3,4-oxadiazol-2-yl}-1-benzothiophen-3-yl)oxy]piperidine, AMMONIUM ION, ...
著者Rackham, M.D, Brannigan, J.A, Rangachari, K, Wilkinson, A.J, Holder, A.A, Tate, E.W, Leatherbarrow, R.J.
登録日2013-10-08
公開日2014-04-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design and Synthesis of High Affinity Inhibitors of Plasmodium Falciparum and Plasmodium Vivax N-Myristoyltransferases Directed by Ligand Efficiency Dependent Lipophilicity (Lelp).
J.Med.Chem., 57, 2014
1PY2
DownloadVisualize
BU of 1py2 by Molmil
Structure of a 60 nM Small Molecule Bound to a Hot Spot on IL-2
分子名称: 5-[2,3-DICHLORO-4-(5-{1-[2-(2-GUANIDINO-4-METHYL-PENTANOYLAMINO)-ACETYL]-PIPERIDIN-4-YL}-1-METHYL-1H-PYRAZOL-3-YL)-PHENOXYMETHYL]-FURAN-2-CARBOXYLIC ACID, Interleukin-2, ZINC ION
著者Thanos, C.D, Randal, M, Wells, J.A.
登録日2003-07-07
公開日2004-01-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Potent small-molecule binding to a dynamic hot spot on IL-2.
J.Am.Chem.Soc., 125, 2003

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon