Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 6628 件

7QG6
DownloadVisualize
BU of 7qg6 by Molmil
Co-crystal structure of UPF3A-RRM-NOPS-L with UPF2-MIF4GIII
分子名称: CHLORIDE ION, Regulator of nonsense transcripts 2, Regulator of nonsense transcripts 3A, ...
著者Powers, K.T, Bufton, J.C, Szeto, J.A, Schaffitzel, C.
登録日2021-12-07
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structures of nonsense-mediated mRNA decay factors UPF3B and UPF3A in complex with UPF2 reveal molecular basis for competitive binding and for neurodevelopmental disorder-causing mutation.
Nucleic Acids Res., 50, 2022
6TWW
DownloadVisualize
BU of 6tww by Molmil
Variant W229D/F290W-19 of the last common ancestor of Gram-negative bacteria beta-lactamase class A (GNCA4)
分子名称: ACETATE ION, Beta-Lactamase (GNCA4), FORMIC ACID, ...
著者Gavira, J.A, Risso, V, Sanchez-Ruiz, J.M, Romero-Rivera, A, Kamerlin, S.C.L.
登録日2020-01-13
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Enhancing ade novoenzyme activity by computationally-focused ultra-low-throughput screening.
Chem Sci, 11, 2020
6U8K
DownloadVisualize
BU of 6u8k by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3
分子名称: Heavy chain of Fab HCV3, JIIIabc RNA (68-MER), Light chain of Fab HCV3
著者Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
登録日2019-09-05
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
6U63
DownloadVisualize
BU of 6u63 by Molmil
Mcl-1 bound to compound 17
分子名称: 2-{[(naphthalen-2-yl)sulfonyl]amino}-5-[(2-phenylethyl)sulfanyl]benzoic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Stuckey, J.A.
登録日2019-08-29
公開日2020-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Discovery and Characterization of 2,5-Substituted Benzoic Acid Dual Inhibitors of the Anti-apoptotic Mcl-1 and Bfl-1 Proteins.
J.Med.Chem., 63, 2020
6U9K
DownloadVisualize
BU of 6u9k by Molmil
MLL1 SET N3861I/Q3867L bound to inhibitor 18 (TC-5153)
分子名称: 5'-([(3S)-3-amino-3-carboxypropyl]{[1-(3,3-diphenylpropyl)azetidin-3-yl]methyl}amino)-5'-deoxyadenosine, GLYCEROL, Histone-lysine N-methyltransferase, ...
著者Petrunak, E.M, Stuckey, J.A.
登録日2019-09-09
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020
7Q9X
DownloadVisualize
BU of 7q9x by Molmil
Crystal structure of Chromobacterium violaceum aminotransferase in complex with PLP-pyruvate adduct
分子名称: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Isupov, M.N, Mitchell, D, Sayer, C, Littlechild, J.A.
登録日2021-11-15
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Aminotransferase from Chromobacterium violaceum in complex with PLP-pyruvate adduct.
To Be Published
6TXD
DownloadVisualize
BU of 6txd by Molmil
Variant W229D/F290W-12 of the last common ancestor of Gram-negative bacteria beta-lactamase class A (GNCA4)
分子名称: ACETATE ION, Beta lactamase (GNCA4-12), FORMIC ACID, ...
著者Gavira, J.A, Risso, V, Sanchez-Ruiz, J.M, Romero-Rivera, A, Kamerlin, S.C.L.
登録日2020-01-14
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Enhancing ade novoenzyme activity by computationally-focused ultra-low-throughput screening.
Chem Sci, 11, 2020
7Q9Z
DownloadVisualize
BU of 7q9z by Molmil
Crystal structure of Chromobacterium violaceum aminotransferase in complex with PLP-pyruvate adduct
分子名称: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Isupov, M.N, Mitchell, D, Sayer, C, Littlechild, J.A.
登録日2021-11-15
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Aminotransferase from Chromobacterium violaceum in complex with PLP-pyruvate adduct.
To Be Published
6U6F
DownloadVisualize
BU of 6u6f by Molmil
The crystal structure of anti-apoptotic Mcl-1 protein in complex with 2, 5-substituted benzoic acid inhibitor 21
分子名称: 2-[({4-[(4-tert-butylphenyl)methyl]piperazin-1-yl}sulfonyl)amino]-5-[(2-phenylethyl)sulfanyl]benzoic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Yang, Y, Stuckey, J.A, Nikolovska-Coleska, Z.
登録日2019-08-29
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery and Characterization of 2,5-Substituted Benzoic Acid Dual Inhibitors of the Anti-apoptotic Mcl-1 and Bfl-1 Proteins.
J.Med.Chem., 63, 2020
7QEJ
DownloadVisualize
BU of 7qej by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-acetic acid (IAA).
分子名称: 1H-INDOL-3-YLACETIC ACID, MAGNESIUM ION, TRANSCRIPTIONAL REGULATOR AdmX
著者Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
登録日2021-12-03
公開日2022-12-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QEK
DownloadVisualize
BU of 7qek by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-piruvic acid (IPA).
分子名称: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, MAGNESIUM ION, regulator AdmX
著者Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
登録日2021-12-03
公開日2022-12-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QTR
DownloadVisualize
BU of 7qtr by Molmil
GB1 in mammalian cells, 50 uM
分子名称: Immunoglobulin G-binding protein G
著者Gerez, J.A, Prymaczok, N.C, Kadavath, H, Gosh, D, Butikofer, M, Guntert, P, Riek, R.
登録日2022-01-15
公開日2022-12-21
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein structure determination in human cells by in-cell NMR and a reporter system to optimize protein delivery or transexpression.
Commun Biol, 5, 2022
7QTS
DownloadVisualize
BU of 7qts by Molmil
GB1 in mammalian cells, 10 uM
分子名称: Immunoglobulin G-binding protein G
著者Gerez, J.A, Prymaczok, N.C, Kadavath, H, Gosh, D, Butikofer, M, Guntert, P, Riek, R.
登録日2022-01-15
公開日2022-12-21
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Protein structure determination in human cells by in-cell NMR and a reporter system to optimize protein delivery or transexpression.
Commun Biol, 5, 2022
6UEB
DownloadVisualize
BU of 6ueb by Molmil
Structure of Rabies SAD-B19 L-P complex from cryo-EM
分子名称: Large structural protein, Phosphoprotein,Phosphoprotein, ZINC ION
著者Horwitz, J.A, Harrison, S.C.
登録日2019-09-20
公開日2020-02-05
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of a rabies virus polymerase complex from electron cryo-microscopy.
Proc.Natl.Acad.Sci.USA, 117, 2020
7QSJ
DownloadVisualize
BU of 7qsj by Molmil
Methylmannose polysaccharide hydrolase MmpH from M. hassiacum
分子名称: GLYCEROL, MAGNESIUM ION, Methylmannose polysaccharide hydrolase (MmpH), ...
著者Ripoll-Rozada, J, Manso, J.A, Pereira, P.J.B.
登録日2022-01-13
公開日2023-01-25
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Self-recycling and partially conservative replication of mycobacterial methylmannose polysaccharides.
Commun Biol, 6, 2023
7QON
DownloadVisualize
BU of 7qon by Molmil
Monoclinic triose phosphate isomerase from Fasciola hepatica.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
著者Kontellas, G, Isupov, M.N, Littlechild, J.A.
登録日2021-12-24
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Monoclinic triose phosphate isomerase from Fasciola hepatica.
To Be Published
7QSG
DownloadVisualize
BU of 7qsg by Molmil
Methylmannose polysaccharide mannosyltransferase from M. hassiacum
分子名称: D-inositol 3-phosphate glycosyltransferase
著者Manso, J.A, Ripoll-Rozada, J, Pereira, P.J.B.
登録日2022-01-13
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Self-recycling and partially conservative replication of mycobacterial methylmannose polysaccharides.
Commun Biol, 6, 2023
7QVW
DownloadVisualize
BU of 7qvw by Molmil
R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
分子名称: CALCIUM ION, GLYCEROL, PHOSPHATE ION, ...
著者Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E.
登録日2022-01-23
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.922 Å)
主引用文献R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
To Be Published
7QW3
DownloadVisualize
BU of 7qw3 by Molmil
R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera in complex with Br ion.
分子名称: BROMIDE ION, CALCIUM ION, GLYCEROL, ...
著者Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E.
登録日2022-01-24
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
To Be Published
7QWI
DownloadVisualize
BU of 7qwi by Molmil
Vanadate complex of the vanadium-dependent bromoperoxidase from Corallina pilulifera
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, CALCIUM ION, ...
著者Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E.
登録日2022-01-25
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
To Be Published
7QYY
DownloadVisualize
BU of 7qyy by Molmil
Vanadium-dependent bromoperoxidase from Corallina pilulifera in complex with chloride
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Isupov, M.N, Mitchell, D, Littelchild, J.A, Garcia-Rodriguez, E.
登録日2022-01-29
公開日2023-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献R396W mutant of the vanadium-dependent bromoperoxidase from Corallina pilulifera
To Be Published
6U9N
DownloadVisualize
BU of 6u9n by Molmil
MLL1 SET N3861I/Q3867L bound to inhibitor 14 (TC-5139)
分子名称: 5'-{[(3S)-3-amino-3-carboxypropyl]({1-[(4-chlorophenyl)methyl]azetidin-3-yl}methyl)amino}-5'-deoxyadenosine, Histone-lysine N-methyltransferase, ZINC ION
著者Petrunak, E.M, Stuckey, J.A.
登録日2019-09-09
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020
7QRL
DownloadVisualize
BU of 7qrl by Molmil
LytM domain of DipM, a coordinator of a complex net of autolysins in Caulobacter crescentus
分子名称: DipM
著者Batuecas, M.T, Miguel-Ruano, V, Hermoso, J.A.
登録日2022-01-11
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献LytM domain of DipM, a coordinator of a complex net of autolysins in Caulobacter crescentus
Nat Commun, 2023
6O9S
DownloadVisualize
BU of 6o9s by Molmil
Crystal structure of Staphylococcus aureus MecR1 antibiotic-sensor domain in complex with avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Methicillin resistance mecR1 protein, SULFATE ION
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2019-03-14
公開日2020-06-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural analysis of avibactam-mediated activation of the bla and mec divergons in methicillin-resistant Staphylococcus aureus .
J.Biol.Chem., 295, 2020
7QVD
DownloadVisualize
BU of 7qvd by Molmil
X-ray structure of the lytic transglycosylase SltB2 from Pseudomonas aeruginosa
分子名称: CALCIUM ION, Lytic murein transglycosylase
著者Batuecas, M.T, Miguel-Ruano, V, Hermoso, J.A.
登録日2022-01-21
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray structure of SltB2 from Pseudomonas aeruginosa
To Be Published

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon