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PDB: 6628 results

2HGY
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Structure of S65A Y66F E222A GFP variant after cyclization and carbon-carbon bond cleavage
Descriptor: Green fluorescent protein
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-27
Release date:2007-03-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
2UUK
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BU of 2uuk by Molmil
Thrombin-hirugen-gw420128 ternary complex at 1.39A resolution
Descriptor: CALCIUM ION, HIRUDIN I, HUMAN ALPHA THROMBIN, ...
Authors:Ahmed, H.U, Blakeley, M.P, Cianci, M, Cruickshank, D.W.J, Hubbard, J.A, Helliwell, J.R.
Deposit date:2007-03-03
Release date:2007-09-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:The Determination of Protonation States in Proteins.
Acta Crystallogr.,Sect.D, 63, 2007
2HG6
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BU of 2hg6 by Molmil
Solution NMR Structure of Protein PA1123 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT4; Ontario Centre for Structural Proteomics Target PA1123.
Descriptor: Hypothetical protein
Authors:Lemak, A, Srisailam, S, Yee, A, Lukin, J.A, Orekhov, V.Y, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-06-26
Release date:2006-07-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of a hypothetical protein from Pseudomonas aeruginosa (Northeast Structural Genomics Consortium Target: PaT4; Ontario Centre for Structural Proteomics Target: PA1123)
To be Published
2UWO
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Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa
Descriptor: (2R)-2-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}PROPENE-1-SULFONAMIDE, COAGULATION FACTOR X
Authors:Young, R.J, Brown, D, Burns-Kurtis, C.L, Chan, C, Convery, M.A, Hubbard, J.A, Kelly, H.A, Pateman, A.J, Patikis, A, Senger, S, Shah, G.P, Toomey, J.R, Watson, N.S, Zhou, P.
Deposit date:2007-03-22
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa.
Bioorg.Med.Chem.Lett., 17, 2007
2HI2
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BU of 2hi2 by Molmil
Crystal structure of native Neisseria gonorrhoeae Type IV pilin at 2.3 Angstroms Resolution
Descriptor: Fimbrial protein, HEPTANE-1,2,3-TRIOL, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, ...
Authors:Craig, L, Arvai, A.S, Tainer, J.A.
Deposit date:2006-06-28
Release date:2006-09-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Type IV Pilus Structure by Cryo-Electron Microscopy and Crystallography: Implications for Pilus Assembly and Functions.
Mol.Cell, 23, 2006
1JGG
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BU of 1jgg by Molmil
Even-skipped Homeodomain Complexed to AT-rich DNA
Descriptor: 5'-D(P*AP*AP*TP*TP*CP*AP*AP*TP*TP*A)-3', 5'-D(P*TP*AP*AP*TP*TP*GP*AP*AP*TP*T)-3', Segmentation Protein Even-Skipped
Authors:Hirsch, J.A, Aggarwal, A.K.
Deposit date:2001-06-25
Release date:2001-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the even-skipped homeodomain complexed to AT-rich DNA: new perspectives on homeodomain specificity.
EMBO J., 14, 1995
2HIU
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NMR STRUCTURE OF HUMAN INSULIN IN 20% ACETIC ACID, ZINC-FREE, 10 STRUCTURES
Descriptor: INSULIN
Authors:Hua, Q.X, Gozani, S.N, Chance, R.E, Hoffmann, J.A, Frank, B.H, Weiss, M.A.
Deposit date:1996-10-08
Release date:1997-04-01
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Structure of a protein in a kinetic trap.
Nat.Struct.Biol., 2, 1995
2VK5
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BU of 2vk5 by Molmil
THE STRUCTURE OF CLOSTRIDIUM PERFRINGENS NANI SIALIDASE AND ITS CATALYTIC INTERMEDIATES
Descriptor: CALCIUM ION, EXO-ALPHA-SIALIDASE, GLYCEROL
Authors:Newstead, S.L, Potter, J.A, Wilson, J.C, Xu, G, Chien, C.H, Watts, A.G, Withers, S.G, Taylor, G.L.
Deposit date:2007-12-17
Release date:2008-01-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The Structure of Clostridium Perfringens Nani Sialidase and its Catalytic Intermediates.
J.Biol.Chem., 283, 2008
2V4L
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complex of human phosphoinositide 3-kinase catalytic subunit gamma (p110 gamma) with PIK-284
Descriptor: 3-[4-AMINO-1-(1-METHYLETHYL)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-3-YL]PHENOL, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT GAMMA ISOFORM
Authors:Apsel, B, Gonzalez, B, Blair, J.A, Nazif, T.M, Feldman, M.E, Williams, R.L, Shokat, K.M, Knight, Z.A.
Deposit date:2008-09-25
Release date:2008-10-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Targeted Polypharmacology: Discovery of Dual Inhibitors of Tyrosine and Phosphoinositide Kinases.
Nat.Chem.Biol., 4, 2008
2UWL
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Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa
Descriptor: 2-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}ETHENESULFONAMIDE, COAGULATION FACTOR X
Authors:Young, R.J, Brown, D, Burns-Kurtis, C.L, Chan, C, Convery, M.A, Hubbard, J.A, Kelly, H.A, Pateman, A.J, Patikis, A, Senger, S, Shah, G.P, Toomey, J.R, Watson, N.S, Zhou, P.
Deposit date:2007-03-22
Release date:2007-04-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selective and Dual Action Orally Active Inhibitors of Thrombin and Factor Xa.
Bioorg.Med.Chem.Lett., 17, 2007
2V5U
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I92A FLAVODOXIN FROM ANABAENA
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Martinez-Julvez, M, Herguedas, B, Frago, S, Serrano, A, Molina, R, Hamiaux, C, Schierbeek, B, Medina, M, Hermoso, J.A.
Deposit date:2007-07-10
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Tuning of the Fmn Binding and Oxido-Reduction Properties by Neighboring Side Chains in Anabaena Flavodoxin.
Arch.Biochem.Biophys., 467, 2007
2DQR
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BU of 2dqr by Molmil
Crystal structure of the replication terminator protein mutant RTP.E39K.R42Q
Descriptor: Replication termination protein
Authors:Vivian, J.P, Wilce, J.A, Wilce, M.C.J.
Deposit date:2006-05-29
Release date:2007-05-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure of the replication terminator protein mutant RTP.E39K.R42Q
to be published
4I9O
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BU of 4i9o by Molmil
Crystal Structure of GACKIX L664C Tethered to 1-10
Descriptor: 1,2-ETHANEDIOL, 1-{4-[4-chloro-3-(trifluoromethyl)phenyl]-4-hydroxypiperidin-1-yl}-3-sulfanylpropan-1-one, CREB-binding protein
Authors:Wang, N, Meagher, J.L, Stuckey, J.A, Mapp, A.K.
Deposit date:2012-12-05
Release date:2013-03-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ordering a dynamic protein via a small-molecule stabilizer.
J.Am.Chem.Soc., 135, 2013
1JQG
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BU of 1jqg by Molmil
Crystal Structure of the Carboxypeptidase A from Helicoverpa Armigera
Descriptor: ZINC ION, carboxypeptidase A
Authors:Estebanez-Perpina, E, Bayes, A, Vendrell, J, Jongsma, M.A, Bown, D.P, Gatehouse, J.A, Huber, R, Bode, W, Aviles, F.X, Reverter, D.
Deposit date:2001-08-07
Release date:2002-08-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a novel mid-gut procarboxypeptidase from the cotton pest Helicoverpa armigera.
J.Mol.Biol., 313, 2001
1JGL
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BU of 1jgl by Molmil
Crystal structure of immunoglobulin Fab fragment complexed with 17-beta-estradiol
Descriptor: ESTRADIOL, Ig gamma-1-chain, Ig kappa-chain
Authors:Lamminmaki, U, Kankare, J.A.
Deposit date:2001-06-26
Release date:2001-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a recombinant anti-estradiol Fab fragment in complex with 17beta -estradiol.
J.Biol.Chem., 276, 2001
2HRS
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BU of 2hrs by Molmil
Crystal structure of L42H V224H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-07-20
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
1JDF
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BU of 1jdf by Molmil
Glucarate Dehydratase from E.coli N341D mutant
Descriptor: 2,3-DIHYDROXY-5-OXO-HEXANEDIOATE, Glucarate Dehydratase, ISOPROPYL ALCOHOL, ...
Authors:Gulick, A.M, Hubbard, B.K, Gerlt, J.A, Rayment, I.
Deposit date:2001-06-13
Release date:2001-09-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: identification of the general acid catalyst in the active site of D-glucarate dehydratase from Escherichia coli.
Biochemistry, 40, 2001
2HJO
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Crystal structure of V224H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-30
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
2HQZ
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BU of 2hqz by Molmil
Crystal structure of L42H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-07-19
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
2HT6
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BU of 2ht6 by Molmil
Crystal structure of Human Gem G-domain bound to GDP
Descriptor: GTP-binding protein GEM, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Opatowsky, Y, Hirsch, J.A.
Deposit date:2006-07-25
Release date:2006-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-function studies of the G-domain from human gem, a novel small G-protein.
Febs Lett., 580, 2006
2HNE
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BU of 2hne by Molmil
Crystal structure of l-fuconate dehydratase from xanthomonas campestris pv. campestris str. ATCC 33913
Descriptor: L-fuconate dehydratase, MAGNESIUM ION
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Gerlt, J.A, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-07-12
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of l-fuconate dehydratase from xanthomonas campestris pv. campestris str. ATCC 33913
To be Published
2HO2
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Structure of human FE65-WW domain in complex with hMena peptide.
Descriptor: Amyloid beta A4 protein-binding family B member 1, GLYCEROL, Protein enabled homolog
Authors:Meiyappan, M, Birrane, G, Ladias, J.A.
Deposit date:2006-07-13
Release date:2007-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural Basis for Polyproline Recognition by the FE65 WW Domain.
J.Mol.Biol., 372, 2007
2DTB
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BU of 2dtb by Molmil
DELTA-TOXIN AND ANALOGUES AS PEPTIDE MODELS FOR PROTEIN ION CHANNELS
Descriptor: DELTA-TOXIN
Authors:Bladon, C.M, Bladon, P, Parkinson, J.A.
Deposit date:1992-09-09
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Delta-toxin and analogues as peptide models for protein ion channels.
Biochem.Soc.Trans., 20, 1992
1E4P
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BU of 1e4p by Molmil
Structure of the ribozyme substrate hairpin of Neurospora VS RNA. A close look at the cleavage site
Descriptor: RNA (5'-R(*GP*UP*GP*CP*GP*AP*AP*GP*AP*CP*GP*AP*AP* AP*GP*UP*CP*CP*GP*AP*GP*CP*GP*C)-3')
Authors:Michiels, P.J.A, Schouten, C.H.J, Heus, H.A, Hilbers, C.W.
Deposit date:2000-07-12
Release date:2001-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Ribozyme Substrate Hairpin of Neurospora Vs RNA: A Close Look at the Cleavage Site
RNA, 6, 2000
2HIL
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Structure of the Neisseria gonorrhoeae Type IV pilus filament from x-ray crystallography and electron cryomicroscopy
Descriptor: Fimbrial protein, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, alpha-D-galactopyranose-(1-3)-2,4-bisacetamido-2,4-dideoxy-beta-D-glucopyranose
Authors:Craig, L, Volkmann, N, Egelman, E.H, Tainer, J.A.
Deposit date:2006-06-29
Release date:2006-09-12
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Type IV Pilus Structure by Cryo-Electron Microscopy and Crystallography: Implications for Pilus Assembly and Functions.
Mol.Cell, 23, 2006

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