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PDB: 42391 results

5HRE
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BU of 5hre by Molmil
The crystal structure of AsfvPolX:DNA3 binary complex
Descriptor: DNA (5'-D(P*AP*GP*GP*AP*TP*CP*CP*T)-3'), DNA polymerase beta-like protein, FORMIC ACID, ...
Authors:Chen, Y.Q, Zhang, J, Gan, J.H.
Deposit date:2016-01-23
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of Se-AsfvPolX(L52/163M mutant) in complex with 1nt-gap DNA1
To Be Published
5HHP
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BU of 5hhp by Molmil
Crystal Structure of HLA-A*0201 in complex with M1-G4E
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Gras, S, Josephs, T.M, Rossjohn, J.
Deposit date:2016-01-11
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for universal HLA-A*0201-restricted CD8+ T-cell immunity against influenza viruses.
Proc.Natl.Acad.Sci.USA, 113, 2016
3TF1
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BU of 3tf1 by Molmil
Crystal structure of an H-NOX protein from T. tengcongensis under 6 atm of xenon
Descriptor: ACETATE ION, Methyl-accepting chemotaxis protein, OXYGEN MOLECULE, ...
Authors:Winter, M.B, Herzik Jr, M.A, Kuriyan, J, Marletta, M.A.
Deposit date:2011-08-15
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.0369 Å)
Cite:Tunnels modulate ligand flux in a heme nitric oxide/oxygen binding (H-NOX) domain.
Proc.Natl.Acad.Sci.USA, 108, 2011
5HRL
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BU of 5hrl by Molmil
The crystal structure of AsfvPolX: 1nt-gap(P) DNA2: dGTP ternary complex.
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*TP*TP*CP*TP*AP*TP*GP*TP*GP*TP*AP*CP*TP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*A)-3'), ...
Authors:Chen, Y.Q, Zhang, J, Gan, J.H.
Deposit date:2016-01-23
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of Se-AsfvPolX(L52/163M mutant) in complex with 1nt-gap DNA1
To Be Published
3TFF
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BU of 3tff by Molmil
Crystal structure of an H-NOX protein from Nostoc sp. PCC 7120, L67W mutant
Descriptor: Alr2278 protein, MALONIC ACID, PROTOPORPHYRIN IX CONTAINING FE
Authors:Winter, M.B, Herzik Jr, M.A, Kuriyan, J, Marletta, M.A.
Deposit date:2011-08-15
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9401 Å)
Cite:Tunnels modulate ligand flux in a heme nitric oxide/oxygen binding (H-NOX) domain.
Proc.Natl.Acad.Sci.USA, 108, 2011
4RK2
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BU of 4rk2 by Molmil
Crystal structure of sugar transporter RHE_PF00321 from Rhizobium etli, target EFI-510806, an open conformation
Descriptor: ACETATE ION, CHLORIDE ION, Putative sugar ABC transporter, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-11
Release date:2014-11-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Sugar Transporter RHE_Pf00321 from Rhizobium Etli, Target EFI-510806
To be Published
4RKR
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BU of 4rkr by Molmil
Crystal structure of LacI family transcriptional regulator from Arthrobacter sp. FB24, target EFI-560007, complex with lactose
Descriptor: Transcriptional regulator, LacI family, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Al Obaidi, N, Chamala, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Lafleur, J, Siedel, R.D, Hillerich, B, Love, J, Whalen, K.L, Gerlt, J.A, Burley, S.K, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-10-13
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of LacI Transcriptional Regulator PurR from Arthrobacter Sp, Target Nysgxrc 11027R
To be Published
5HSI
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BU of 5hsi by Molmil
Crystal structure of tyrosine decarboxylase at 1.73 Angstroms resolution
Descriptor: MAGNESIUM ION, Putative decarboxylase
Authors:Ni, Y, Zhou, J, Zhu, H, Zhang, K.
Deposit date:2016-01-25
Release date:2016-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.732 Å)
Cite:Crystal structure of tyrosine decarboxylase and identification of key residues involved in conformational swing and substrate binding
Sci Rep, 6, 2016
3T1K
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BU of 3t1k by Molmil
HSP90 N-terminal domain bound to ANP
Descriptor: Heat shock protein HSP 90-alpha, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Li, J.
Deposit date:2011-07-22
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:HSP90 N-terminal domain bound to ANP
To be published
3TGV
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BU of 3tgv by Molmil
Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
Descriptor: BENZOIC ACID, Heme-binding protein HutZ
Authors:Liu, X, Gong, J, Wang, Z, Du, Q, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-17
Release date:2012-08-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
To be Published
3T26
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BU of 3t26 by Molmil
Orthorhombic trypsin (bovine) in the presence of sarcosine
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Cahn, J, Venkat, M, Marshall, H, Juers, D.
Deposit date:2011-07-22
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography.
Acta Crystallogr.,Sect.D, 68, 2012
4RMJ
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BU of 4rmj by Molmil
Human Sirt2 in complex with ADP ribose and nicotinamide
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
Deposit date:2014-10-21
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
5HUG
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BU of 5hug by Molmil
The crystal structure of neuraminidase from A/American green-winged teal/Washington/195750/2014 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yang, H, Carney, P.J, Guo, Z, Chang, J.C, Stevens, J.
Deposit date:2016-01-27
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular Characterizations of Surface Proteins Hemagglutinin and Neuraminidase from Recent H5Nx Avian Influenza Viruses.
J.Virol., 90, 2016
3T3K
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BU of 3t3k by Molmil
1.24 A Structure of Friedreich's ataxia frataxin variant Q148R
Descriptor: Frataxin, mitochondrial
Authors:Bridwell-Rabb, J, Winn, A.M, Barondeau, D.P.
Deposit date:2011-07-25
Release date:2011-08-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structure-Function Analysis of Friedreich's Ataxia Mutants Reveals Determinants of Frataxin Binding and Activation of the Fe-S Assembly Complex.
Biochemistry, 50, 2011
2PNQ
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BU of 2pnq by Molmil
Crystal structure of pyruvate dehydrogenase phosphatase 1 (PDP1)
Descriptor: MAGNESIUM ION, [Pyruvate dehydrogenase [lipoamide]]-phosphatase 1
Authors:Vassylyev, D.G, Symersky, J.
Deposit date:2007-04-25
Release date:2007-08-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of pyruvate dehydrogenase phosphatase 1 and its functional implications.
J.Mol.Biol., 370, 2007
6LJQ
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BU of 6ljq by Molmil
human galectin-16 R55N
Descriptor: Galectin-16, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Su, J.
Deposit date:2019-12-17
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Human galectin-16 has a pseudo ligand binding site and plays a role in regulating c-Rel-mediated lymphocyte activity.
Biochim Biophys Acta Gen Subj, 1865, 2020
3SPZ
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BU of 3spz by Molmil
DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine, 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3', 5'-D(P*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-04
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50, 2011
3FVS
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BU of 3fvs by Molmil
Human Kynurenine Aminotransferase I in complex with Glycerol
Descriptor: GLYCEROL, Kynurenine--oxoglutarate transaminase 1, SODIUM ION
Authors:Han, Q, Robinson, H, Cai, T, Tagle, D.A, Li, J.
Deposit date:2009-01-16
Release date:2009-05-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insight into the inhibition of human kynurenine aminotransferase I/glutamine transaminase K
J.Med.Chem., 52, 2009
2PPW
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BU of 2ppw by Molmil
The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae
Descriptor: Conserved domain protein, SULFATE ION
Authors:Wu, R, Zhang, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-30
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae.
To be Published
3SXJ
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BU of 3sxj by Molmil
Crystal structure of complex of BT_2972 and AdoMet, a methyltransferase from Bacteroides thetaiotaomicron
Descriptor: Putative methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-14
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of complex of BT_2972 and AdoMet, a methyltransferase from Bacteroides thetaiotaomicron
To be Published
4Z50
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BU of 4z50 by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20D25N with Tucked Flap
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Agniswamy, J, Shen, C.-H, Weber, I.T.
Deposit date:2015-04-02
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Conformational variation of an extreme drug resistant mutant of HIV protease.
J.Mol.Graph.Model., 62, 2015
6TTY
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BU of 6tty by Molmil
Structure of ClpP from Staphylococcus aureus (apo, closed state)
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Malik, I.T, Pereira, R, Vielberg, M.-T, Mayer, C, Straetener, J, Thomy, D, Famulla, K, Castro, H.C, Sass, P, Groll, M, Broetz-Oesterheldt, H.
Deposit date:2019-12-30
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Functional Characterisation of ClpP Mutations Conferring Resistance to Acyldepsipeptide Antibiotics in Firmicutes.
Chembiochem, 21, 2020
6L3P
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BU of 6l3p by Molmil
Crystal strcuture of Feruloyl-CoA hydratase lyase(FCHL) complexed with CoA
Descriptor: COENZYME A, GLYCEROL, Hydroxycinnamoyl-CoA hydratase-lyase
Authors:Seok, J, Seo, H, Kim, K.-J.
Deposit date:2019-10-14
Release date:2020-10-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis for bioproduction of vanillin by feruloyl-CoA hydratase/lyase from Pseudomonas putida KT2440
to be published
3FQ9
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BU of 3fq9 by Molmil
Design of an insulin analog with enhanced receptor-binding selectivity. Rationale, structure, and therapeutic implications
Descriptor: Insulin, ZINC ION
Authors:Zhao, M, Wan, Z.L, Whittaker, L, Xu, B, Phillips, N, Katsoyannis, P, Whittaker, J, Weiss, M.A.
Deposit date:2009-01-07
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Design of an insulin analog with enhanced receptor binding selectivity: rationale, structure, and therapeutic implications.
J.Biol.Chem., 284, 2009
3FZE
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BU of 3fze by Molmil
Structure of the 'minimal scaffold' (ms) domain of Ste5 that cocatalyzes Fus3 phosphorylation by Ste7
Descriptor: Protein STE5
Authors:Good, M.C, Tang, G, Singleton, J, Remenyi, A, Lim, W.A.
Deposit date:2009-01-25
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:The Ste5 scaffold directs mating signaling by catalytically unlocking the Fus3 MAP kinase for activation.
Cell(Cambridge,Mass.), 136, 2009

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