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PDB: 42289 results

5XRG
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BU of 5xrg by Molmil
Galectin-10/Charcot-Leyden crystal protein crystal structure
Descriptor: GLYCEROL, Galectin-10
Authors:Su, J.
Deposit date:2017-06-08
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Galectin-10: a new structural type of prototype galectin dimer and effects on saccharide ligand binding.
Glycobiology, 28, 2018
5XRK
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BU of 5xrk by Molmil
Galectin-10/Charcot-Leyden crystal protein variant C57A crystal structure
Descriptor: GLYCEROL, Galectin-10
Authors:Su, J.
Deposit date:2017-06-08
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Galectin-10: a new structural type of prototype galectin dimer and effects on saccharide ligand binding.
Glycobiology, 28, 2018
6UP7
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BU of 6up7 by Molmil
neurotensin receptor and arrestin2 complex
Descriptor: ARG-ARG-PRO-TYR-ILE-LEU, Beta-arrestin-1, Neurotensin receptor type 1, ...
Authors:Qu, Q.H, Huang, W, Masureel, M, Janetzko, J, Kobilka, B.K, Skiniotis, G.
Deposit date:2019-10-16
Release date:2020-02-26
Last modified:2020-06-17
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of the neurotensin receptor 1 in complex with beta-arrestin 1.
Nature, 579, 2020
8A5Q
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BU of 8a5q by Molmil
Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80 on straight DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin related protein 4 (Arp4), ...
Authors:Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
Deposit date:2022-06-15
Release date:2022-12-14
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
8QEZ
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BU of 8qez by Molmil
Crystal structure of the AMPA receptor GluA2-L504Y-N775S ligand binding domain in complex with L-glutamate and positive allosteric modulator BPAM395 at 1.55A resolution
Descriptor: 6-chloranyl-4-cyclopropyl-2,3-dihydrothieno[3,2-e][1,2,4]thiadiazine 1,1-dioxide, ACETATE ION, CACODYLATE ION, ...
Authors:Dorosz, J, Laulumaa, S, Frydenvang, K, Kastrup, J.S.
Deposit date:2023-09-01
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Exploring thienothiadiazine dioxides as isosteric analogues of benzo- and pyridothiadiazine dioxides in the search of new AMPA and kainate receptor positive allosteric modulators.
Eur.J.Med.Chem., 264, 2023
2SBT
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BU of 2sbt by Molmil
A COMPARISON OF THE THREE-DIMENSIONAL STRUCTURES OF SUBTILISIN BPN AND SUBTILISIN NOVO
Descriptor: ACETONE, SUBTILISIN NOVO
Authors:Drenth, J, Hol, W.G.J, Jansonius, J.N, Koekoek, R.
Deposit date:1976-09-07
Release date:1976-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A comparison of the three-dimensional structures of subtilisin BPN' and subtilisin novo.
Cold Spring Harbor Symp.Quant.Biol., 36, 1972
8A5P
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BU of 8a5p by Molmil
Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80 on curved DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin related protein 4 (Arp4), ...
Authors:Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
Deposit date:2022-06-15
Release date:2022-12-14
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
8A5A
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BU of 8a5a by Molmil
Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of INO80
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin-like protein ARP8, ...
Authors:Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
Deposit date:2022-06-14
Release date:2022-12-14
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
6OA8
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BU of 6oa8 by Molmil
Superfolder Green Fluorescent Protein with 4-cyano-L-phenylalanine at the chromophore (position 66)
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, SODIUM ION, ...
Authors:Piacentini, J, Olenginski, G.M, Brewer, S.H, Phillips-Piro, C.M.
Deposit date:2019-03-15
Release date:2020-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein
Acta Crystallogr.,Sect.D, 2021
7ZR5
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BU of 7zr5 by Molmil
CryoEM structure of HSP90-CDC37-BRAF(V600E)-PP5(closed) complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ...
Authors:Oberoi, J, Pearl, L.H.
Deposit date:2022-05-03
Release date:2022-12-14
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:HSP90-CDC37-PP5 forms a structural platform for kinase dephosphorylation.
Nat Commun, 13, 2022
7ZR0
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BU of 7zr0 by Molmil
CryoEM structure of HSP90-CDC37-BRAF(V600E) complex.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ...
Authors:Oberoi, J, Pearl, L.H.
Deposit date:2022-05-03
Release date:2022-12-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:HSP90-CDC37-PP5 forms a structural platform for kinase dephosphorylation.
Nat Commun, 13, 2022
2TDM
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BU of 2tdm by Molmil
STRUCTURE OF THYMIDYLATE SYNTHASE
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Finer-Moore, J, Stroud, R.M.
Deposit date:1997-03-28
Release date:1997-08-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Refined structures of substrate-bound and phosphate-bound thymidylate synthase from Lactobacillus casei.
J.Mol.Biol., 232, 1993
2MF4
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BU of 2mf4 by Molmil
1H, 13C, 15N chemical shift assignments of Streptomyces virginiae VirA acp5a
Descriptor: Hybrid polyketide synthase-non ribosomal peptide synthetase
Authors:Davison, J, Dorival, J, Rabeharindranto, M.H, Mazon, H, Chagot, B, Gruez, A, Weissman, K.J.
Deposit date:2013-10-05
Release date:2014-06-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR assignements of ACP5a
To be Published
7V5N
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BU of 7v5n by Molmil
Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*TP*GP*GP*TP*AP*GP*TP*TP*AP*CP*GP*TP*TP*CP*GP*C)-3'), IMIDAZOLE, ...
Authors:Hishiki, A, Tong, J, Todoroki, K, Hashimoto, H.
Deposit date:2021-08-17
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Development of a DNA aptamer that binds to the complementarity-determining region of therapeutic monoclonal antibody and affinity improvement induced by pH-change for sensitive detection.
Biosens.Bioelectron., 203, 2022
8QO0
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BU of 8qo0 by Molmil
Asymmetric structure of the Borrelia bacteriophage BB1 procapsid, 3D class 2
Descriptor: Cytosolic protein, DUF228 domain-containing protein, Decoration protein P03, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-09-27
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (10.62 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
7VW2
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BU of 7vw2 by Molmil
Structure of a dimeric periplasmic protein bound with cupric ions
Descriptor: COPPER (II) ION, DUF305 domain-containing protein
Authors:Yang, J, Liu, L.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.186 Å)
Cite:Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
6OAG
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BU of 6oag by Molmil
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-82
Descriptor: Farnesyl pyrophosphate synthase, PHOSPHATE ION, [(1S)-1-{[6-(3-chloro-4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}-2-phenylethyl]phosphonic acid
Authors:Park, J, Berghuis, A.M.
Deposit date:2019-03-16
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Chirality-Driven Mode of Binding of alpha-Aminophosphonic Acid-Based Allosteric Inhibitors of the Human Farnesyl Pyrophosphate Synthase (hFPPS).
J.Med.Chem., 62, 2019
4LYB
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BU of 4lyb by Molmil
CdS within a lysoyzme single crystal
Descriptor: CADMIUM ION, Lysozyme C
Authors:Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y.
Deposit date:2013-07-30
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
8PQN
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BU of 8pqn by Molmil
NQO1 bound to RBS-10
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1, ~{N}-[4-[(3-methylphenyl)carbonylamino]phenyl]-5-nitro-furan-2-carboxamide
Authors:Pous, J, Jose-Duran, F, Mayor-Ruiz, C, Riera, A.
Deposit date:2023-07-11
Release date:2024-01-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Discovery and Mechanistic Elucidation of NQO1-Bioactivatable Small Molecules That Overcome Resistance to Degraders.
Angew.Chem.Int.Ed.Engl., 63, 2024
6V9Z
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BU of 6v9z by Molmil
Cryo-EM structure of PCAT1 bound to its CtA peptide substrate
Descriptor: ABC-type bacteriocin transporter, CtA
Authors:Kieuvongngam, V, Oldham, M.L, Chen, J.
Deposit date:2019-12-16
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural basis of substrate recognition by a polypeptide processing and secretion transporter.
Elife, 9, 2020
2K28
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BU of 2k28 by Molmil
Solution NMR structure of the chromo domain of the chromobox protein homolog 4
Descriptor: E3 SUMO-protein ligase CBX4
Authors:Kaustov, L, Lemak, A, Quyang, H, Fares, C, Gutmanas, A, Ravichandran, M, Loppnau, P, Bountra, C, Weigelt, J, Edwards, A.M, Min, J, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2008-03-27
Release date:2008-04-08
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution NMR structure of the chromo domain of the chromobox protein homolog 4.
To be Published
7VW1
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BU of 7vw1 by Molmil
Structure of a dimeric periplasmic protein bound with cuprous ions
Descriptor: COPPER (I) ION, DUF305 domain-containing protein
Authors:Yang, J, Liu, L.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
7VW0
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BU of 7vw0 by Molmil
Structure of a dimeric periplasmic protein
Descriptor: DUF305 domain-containing protein
Authors:Yang, J, Liu, L.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.447 Å)
Cite:Structural basis of copper binding by a dimeric periplasmic protein forming a six-helical bundle.
J.Inorg.Biochem., 229, 2022
8A5O
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BU of 8a5o by Molmil
Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of S. cerevisiae INO80
Descriptor: Actin, Actin-like protein ARP8, Actin-related protein 4, ...
Authors:Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
Deposit date:2022-06-15
Release date:2022-12-14
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
6OD7
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BU of 6od7 by Molmil
Herpes simplex virus type 1 (HSV-1) pUL6 portal protein, dodecameric complex
Descriptor: Portal protein
Authors:Liu, Y.T, Jih, J, Dai, X.H, Bi, G.Q, Zhou, Z.H.
Deposit date:2019-03-26
Release date:2019-06-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome.
Nature, 570, 2019

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