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PDB: 42507 件

7JYO
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JAK2 JH2 in complex with JAK064
分子名称: 3-({4-amino-6-[(4-cyanophenyl)amino]-1,3,5-triazin-2-yl}oxy)benzoic acid, GLYCEROL, Tyrosine-protein kinase JAK2
著者Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
登録日2020-08-31
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.16127229 Å)
主引用文献Indoloxytriazines as binding molecules for the JAK2 JH2 pseudokinase domain and its V617F variant
Tetrahedron Lett., 77, 2021
3AR7
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Calcium pump crystal structure with bound TNP-ATP and TG in the absence of Ca2+
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Toyoshima, C, Yonekura, S, Tsueda, J, Iwasawa, S.
登録日2010-11-24
公開日2011-02-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
3AQ8
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Crystal structure of truncated hemoglobin from Tetrahymena pyriformis, Q46E mutant, Fe(III) form
分子名称: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Igarashi, J, Kobayashi, K, Matsuoka, A.
登録日2010-10-25
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification.
J.Biol.Inorg.Chem., 16, 2011
5IC1
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Structural analysis of a talin triple domain module, E1794Y, E1797Y, Q1801Y mutant
分子名称: 1,2-ETHANEDIOL, Talin-1
著者Wu, J, Chang, Y.-C.E, Zhang, H, Huang, Q.-Q.
登録日2016-02-22
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Functional Analysis of a Talin Triple-Domain Module Suggests an Alternative Talin Autoinhibitory Configuration.
Structure, 24, 2016
3HLB
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Simvastatin Synthase (LovD) from Aspergillus terreus, unliganded, selenomethionyl derivative
分子名称: SULFATE ION, Transesterase
著者Sawaya, M.R, Yeates, T.O, Laidman, J, Pashkov, I, Gao, X, Tang, Y.
登録日2009-05-27
公開日2009-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Directed evolution and structural characterization of a simvastatin synthase
Chem.Biol., 16, 2009
3AR5
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BU of 3ar5 by Molmil
Calcium pump crystal structure with bound TNP-AMP and TG
分子名称: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Yonekura, S, Tsueda, J, Iwasawa, S.
登録日2010-11-24
公開日2011-02-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Trinitrophenyl derivatives bind differently from parent adenine nucleotides to Ca2+-ATPase in the absence of Ca2+
Proc.Natl.Acad.Sci.USA, 108, 2011
7JYQ
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BU of 7jyq by Molmil
JAK2 JH2 in complex with JAK020
分子名称: GLYCEROL, N~2~-(4-fluorophenyl)-6-{[(5-{[(oxolan-2-yl)methyl]amino}-1,3,4-thiadiazol-2-yl)sulfanyl]methyl}-1,3,5-triazine-2,4-diamine, Tyrosine-protein kinase JAK2
著者Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
登録日2020-08-31
公開日2021-07-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85941613 Å)
主引用文献Indoloxytriazines as binding molecules for the JAK2 JH2 pseudokinase domain and its V617F variant
Tetrahedron Lett., 77, 2021
8AP1
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BU of 8ap1 by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with two GTP molecules poised for de novo initiation (IC2)
分子名称: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-09
公開日2023-08-23
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
1GMI
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Structure of the c2 domain from novel protein kinase C epsilon
分子名称: MAGNESIUM ION, PROTEIN KINASE C, EPSILON TYPE
著者Ochoa, W.F, Garcia-Garcia, J, Fita, I, Corbalan-Garcia, S, Verdaguer, N, Gomez-Fernandez, J.C.
登録日2001-09-14
公開日2001-10-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the C2 Domain from Novel Protein Kinase Cepsilon. A Membrane Binding Model for Ca(2+ )-Independent C2 Domains
J.Mol.Biol., 311, 2001
5D46
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Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination
分子名称: ACETATE ION, DNA (5'-D(*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*GP*C)-3'), ...
著者Loc'h, J, Rosario, S, Delarue, M.
登録日2015-08-07
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination.
Structure, 24, 2016
5D4N
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Structure of CPII bound to ADP, AMP and acetate, from Thiomonas intermedia K12
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
著者Wheatley, N.M, Ngo, J, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2015-08-08
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.
J.Mol.Biol., 428, 2016
3HMF
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Crystal Structure of the second Bromodomain of Human Poly-bromodomain containing protein 1 (PB1)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Protein polybromo-1, ...
著者Filippakopoulos, P, Picaud, S, Keates, T, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2009-05-29
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
8AIA
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Cryo-EM structure of crescentin filaments (wildtype, C1 symmetry and large box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-26
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8ATV
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BU of 8atv by Molmil
Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex with 5-mer RNA, pppGpGpApApA (IC5)
分子名称: DNA (36-MER), DNA-directed RNA polymerase, mitochondrial, ...
著者Goovaerts, Q, Shen, J, Patel, S.S, Das, K.
登録日2022-08-24
公開日2023-08-30
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structures illustrate step-by-step mitochondrial transcription initiation.
Nature, 622, 2023
5D6O
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BU of 5d6o by Molmil
Orthorhombic Crystal Structure of an acetylester hydrolase from Corynebacterium glutamicum
分子名称: CHLORIDE ION, GLYCEROL, Homoserine O-acetyltransferase, ...
著者Niefind, K, Toelzer, C, Altenbuchner, J, Watzlawick, H.
登録日2015-08-12
公開日2015-12-09
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel esterase subfamily with alpha / beta-hydrolase fold suggested by structures of two bacterial enzymes homologous to l-homoserine O-acetyl transferases.
Febs Lett., 590, 2016
8AHD
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The apo structure of the Corramycin phosphotransferase
分子名称: Corramycin phosphotransferase, GLYCEROL
著者Adam, S, Mueller, R, Koehnke, J.
登録日2022-07-21
公開日2023-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The apo structure of the Corramycin phosphotransferase
To Be Published
8AIX
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Cryo-EM structure of crescentin filaments (wildtype, C2 symmetry and large box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-27
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
1JZD
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DsbC-DsbDalpha complex
分子名称: thiol:disulfide interchange protein dsbc, thiol:disulfide interchange protein dsbd
著者Haebel, P.W, Goldstone, D, Katzen, F, Beckwith, J, Metcalf, P.
登録日2001-09-15
公開日2003-03-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Disulfide Bond Isomerase DsbC is Activated by an Immunoglobulin-fold Thiol Oxidoreductase: Crystal structure of the DsbC-DsbDalpha complex.
Embo J., 21, 2002
3AQ6
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Crystal structure of truncated hemoglobin from Tetrahymena pyriformis, Fe(III) form
分子名称: Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Igarashi, J, Kobayashi, K, Matsuoka, A.
登録日2010-10-25
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献A hydrogen-bonding network formed by the B10-E7-E11 residues of a truncated hemoglobin from Tetrahymena pyriformis is critical for stability of bound oxygen and nitric oxide detoxification.
J.Biol.Inorg.Chem., 16, 2011
5DA5
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Crystal structure of Rhodospirillum rubrum Rru_A0973
分子名称: CALCIUM ION, FE (III) ION, GLYCOLIC ACID, ...
著者He, D, Vanden Hehier, S, Georgiev, A, Altenbach, K, Tarrant, E, Mackay, C.L, Waldron, K.J, Clarke, D.J, Marles-Wright, J.
登録日2015-08-19
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.064 Å)
主引用文献Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments.
Elife, 5, 2016
1SHR
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Crystal structure of ferrocyanide bound human hemoglobin A2 at 1.88A resolution
分子名称: CYANIDE ION, FE (III) ION, Hemoglobin alpha chain, ...
著者Sen, U, Dasgupta, J, Choudhury, D, Datta, P, Chakrabarti, A, Chakrabarty, S.B, Chakrabarty, A, Dattagupta, J.K.
登録日2004-02-26
公開日2004-10-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structures of HbA2 and HbE and modeling of hemoglobin delta4: interpretation of the thermal stability and the antisickling effect of HbA2 and identification of the ferrocyanide binding site in Hb
Biochemistry, 43, 2004
8AFE
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BU of 8afe by Molmil
Cryo-EM structure of crescentin filaments (stutter mutant, C1 symmetry and small box)
分子名称: Crescentin, Crescentin-specific megabody MB13
著者Liu, Y, Lowe, J.
登録日2022-07-17
公開日2023-08-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Filament structure and subcellular organization of the bacterial intermediate filament-like protein crescentin.
Proc.Natl.Acad.Sci.USA, 121, 2024
1RB0
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CRYSTAL STRUCTURE OF A BINARY COMPLEX OF E. COLI HPPK WITH 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE AT 1.35 ANGSTROM RESOLUTION
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE
著者Blaszczyk, J, Ji, X.
登録日2003-10-31
公開日2004-11-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Reaction trajectory of pyrophosphoryl transfer catalyzed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.
Structure, 12, 2004
4P56
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CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM BORDETELLA BRONCHISEPTICA, TARGET EFI-510038 (BB2442), WITH BOUND (R)-MANDELATE and (S)-MANDELATE
分子名称: (R)-MANDELIC ACID, (S)-MANDELIC ACID, Putative extracellular solute-binding protein, ...
著者Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-03-14
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
5IN3
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Crystal structure of glucose-1-phosphate bound nucleotidylated human galactose-1-phosphate uridylyltransferase
分子名称: 1,2-ETHANEDIOL, 1-O-phosphono-alpha-D-glucopyranose, 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE, ...
著者Kopec, J, McCorvie, T, Tallant, C, Velupillai, S, Shrestha, L, Fitzpatrick, F, Patel, D, Chalk, R, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
登録日2016-03-07
公開日2016-03-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Molecular basis of classic galactosemia from the structure of human galactose 1-phosphate uridylyltransferase.
Hum.Mol.Genet., 25, 2016

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