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PDB: 42507 件

4JPK
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Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain eOD-GT6 in complex with a putative VRC01 germline precursor Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT6, ...
著者Julien, J.-P, Jardine, J, Schief, W.R, Wilson, I.A.
登録日2013-03-19
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Rational HIV immunogen design to target specific germline B cell receptors.
Science, 340, 2013
4JQX
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HLA-B*44:03 in complex with Epstein-Barr virus BZLF1-derived peptide (residues 169-180)
分子名称: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
著者Theodossis, A, Welland, A, Gras, S, Rossjohn, J.
登録日2013-03-20
公開日2013-06-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献HLA Peptide Length Preferences Control CD8+ T Cell Responses.
J.Immunol., 191, 2013
2AI5
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Solution Structure of Cytochrome C552, determined by Distributed Computing Implementation for NMR data
分子名称: Cytochrome c-552, HEME C
著者Nakamura, S, Ichiki, S.I, Takashima, H, Uchiyama, S, Hasegawa, J, Kobayashi, Y, Sambongi, Y, Ohkubo, T.
登録日2005-07-29
公開日2006-05-23
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structure of Cytochrome c552 from a Moderate Thermophilic Bacterium, Hydrogenophilus thermoluteolus: Comparative Study on the Thermostability of Cytochrome c
Biochemistry, 45, 2006
2ARE
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Pterocarpus angolensis Lectin (PAL) In Complex With D-Mannose (anomeric mixture)
分子名称: CALCIUM ION, MANGANESE (II) ION, alpha-D-mannopyranose, ...
著者Buts, L, Garcia-Pino, A, Imberty, A, Amiot, N, Boons, G.-J, Versees, W, Lah, J, Beeckmans, S, Wyns, L, Loris, R.
登録日2005-08-19
公開日2006-08-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the recognition of complex-type biantennary oligosaccharides by Pterocarpus angolensis lectin.
Febs J., 273, 2006
3QJZ
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Crystal structure of PI3K-gamma in complex with benzothiazole 1
分子名称: N-{6-[2-(methylsulfanyl)pyrimidin-4-yl]-1,3-benzothiazol-2-yl}acetamide, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION
著者Whittington, D.A, Tang, J, Yakowec, P.
登録日2011-01-31
公開日2011-03-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discovery and Optimization of a Series of Benzothiazole Phosphoinositide 3-Kinase (PI3K)/Mammalian Target of Rapamycin (mTOR) Dual Inhibitors.
J.Med.Chem., 54, 2011
3DB5
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BU of 3db5 by Molmil
Crystal structure of methyltransferase domain of human PR domain-containing protein 4
分子名称: PR domain zinc finger protein 4
著者Amaya, M.F, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Plotnikov, A.N, Wu, H, Structural Genomics Consortium (SGC)
登録日2008-05-30
公開日2008-08-12
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of methyltransferase domain of human PR domain-containing protein 4.
To be Published
7D99
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human potassium-chloride co-transporter KCC4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, POTASSIUM ION, ...
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-12
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
6DW3
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SAMHD1 Bound to Cytarabine-TP in the Catalytic Pocket
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
登録日2018-06-26
公開日2018-10-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1M47
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Crystal Structure of Human Interleukin-2
分子名称: SULFATE ION, interleukin-2
著者Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, Wells, J.A, McDowell, R.S, Wells, J.A, Braisted, A.C.
登録日2002-07-02
公開日2002-07-31
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Binding of small molecules to an adaptive protein-protein interface.
Proc.Natl.Acad.Sci.USA, 100, 2003
1M4C
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Crystal Structure of Human Interleukin-2
分子名称: interleukin-2
著者Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C.
登録日2002-07-02
公開日2002-07-31
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Binding of small molecules to an adaptive protein-protein interface
Proc.Natl.Acad.Sci.USA, 100, 2003
2RJD
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BU of 2rjd by Molmil
Crystal structure of L3MBTL1 protein
分子名称: Lethal(3)malignant brain tumor-like protein
著者Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
登録日2007-10-14
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
3QQ4
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Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides
分子名称: Beta-2-microglobulin, MHC class I antigen, VP35
著者Zhang, N, Qi, J, Gao, F, Pan, X, Chen, R, Li, Q, Chen, Z, Li, X, Xia, C, Gao, G.F.
登録日2011-02-15
公開日2011-12-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
J.Virol., 85, 2011
6DW5
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SAMHD1 Bound to Gemcitabine-TP in the Catalytic Pocket
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-deoxy-2',2'-difluorocytidine 5'-(tetrahydrogen triphosphate), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Knecht, K.M, Buzovetsky, O, Schneider, C, Thomas, D, Srikanth, V, Kaderali, L, Tofoleanu, F, Reiss, K, Ferreiros, N, Geisslinger, G, Batista, V.S, Ji, X, Cinatl, J, Keppler, O.T, Xiong, Y.
登録日2018-06-26
公開日2018-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1M4A
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Crystal Structure of Human Interleukin-2 Y31C Covalently Modified at C31 with (1H-Indol-3-yl)-(2-mercapto-ethoxyimino)-acetic acid
分子名称: (1H-INDOL-3-YL)-(2-MERCAPTO-ETHOXYIMINO)-ACETIC ACID, GLYCEROL, interleukin-2
著者Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C.
登録日2002-07-02
公開日2002-07-31
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Binding of small molecules to an adaptive protein-protein interface
Proc.Natl.Acad.Sci.USA, 100, 2003
1M49
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Crystal Structure of Human Interleukin-2 Complexed with SP-1985
分子名称: 2-[2-(1-CARBAMIMIDOYL-PIPERIDIN-3-YL)-ACETYLAMINO]-3-{4-[2-(3-OXALYL-1H-INDOL-7-YL)ETHYL]-PHENYL}-PROPIONIC ACID METHYL ESTER, interleukin-2
著者Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C.
登録日2002-07-02
公開日2002-07-31
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of small molecules to an adaptive protein-protein interface
Proc.Natl.Acad.Sci.USA, 100, 2003
2RFE
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BU of 2rfe by Molmil
Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide
分子名称: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor
著者Zhang, X, Pickin, K.A, Bose, R, Jura, N, Cole, P.A, Kuriyan, J.
登録日2007-09-28
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface.
Nature, 450, 2007
2J3S
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BU of 2j3s by Molmil
Crystal structure of the human filamin A Ig domains 19 to 21
分子名称: 1,4-DIETHYLENE DIOXIDE, BROMIDE ION, FILAMIN-A, ...
著者Kiema, T.-R, Ylanne, J.
登録日2006-08-23
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Three Tandem Filamin Domains Reveals Auto-Inhibition of Ligand-Binding.
Embo J., 26, 2007
6DST
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BU of 6dst by Molmil
Recombinant melittin
分子名称: Melittin
著者Ramirez, L.M, Pande, J, Shekhtman, A.
登録日2018-06-14
公開日2019-04-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Helical Structure of Recombinant Melittin.
J Phys Chem B, 123, 2019
3QWH
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Crystal structure of the 17beta-hydroxysteroid dehydrogenase from Cochliobolus lunatus in complex with NADPH and kaempferol
分子名称: 17beta-hydroxysteroid dehydrogenase, 3,5,7-TRIHYDROXY-2-(4-HYDROXYPHENYL)-4H-CHROMEN-4-ONE, DI(HYDROXYETHYL)ETHER, ...
著者Cassetta, A, Lamba, D, Krastanova, I, Stojan, J, Rizner, T.L, Kristan, K, Brunskole, M.
登録日2011-02-28
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural basis for inhibition of 17 beta-hydroxysteroid dehydrogenases by phytoestrogens: The case of fungal 17 beta-HSDcl.
J. Steroid Biochem. Mol. Biol., 171, 2017
2IYP
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product rup
分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, ADENOSINE-2'-5'-DIPHOSPHATE, ...
著者Sundaramoorthy, R, Iulek, J, Hunter, W.N.
登録日2006-07-21
公開日2007-01-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal Structures of a Bacterial 6-Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates.
FEBS J., 274, 2007
7D90
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human potassium-chloride co-transporter KCC3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, potassium-chloride cotransporter 3
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-12
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
2J6B
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crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses
分子名称: AFV3-109
著者Keller, J, Leulliot, N, Cambillau, C, Campanacci, V, Porciero, S, Prangishvili, D, Cortez, D, Quevillon-Cheruel, S, Van Tilbeurgh, H.
登録日2006-09-27
公開日2007-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Afv3-109, a Highly Conserved Protein from Crenarchaeal Viruses.
Virol J., 4, 2007
7D8Z
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human potassium-chloride co-transporter KCC2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, potassium-chloride cotransporter 2
著者Xie, Y, Chang, S, Zhao, C, Ye, S, Guo, J.
登録日2020-10-11
公開日2020-12-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures and an activation mechanism of human potassium-chloride cotransporters.
Sci Adv, 6, 2020
7DMQ
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Cryo-EM structure of LshCas13a-crRNA-anti-tag RNA complex
分子名称: Anti-tag target RNA, CRISPR RNA, CRISPR/Cas system Cas13a
著者Wang, B, Zhang, T, Ding, J, Patel, D.J, Yang, H.
登録日2020-12-05
公開日2021-02-10
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structural basis for self-cleavage prevention by tag:anti-tag pairing complementarity in type VI Cas13 CRISPR systems.
Mol.Cell, 81, 2021
7DNO
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Characterization of Peptide Ligands Against WDR5 Isolated Using Phage Display Technique
分子名称: CYS-ARG-THR-LEU-PRO-PHE, WD repeat-containing protein 5
著者Cao, J, Cao, D, Xiong, B, Li, Y, Fan, T.
登録日2020-12-10
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Phage-Display Based Discovery and Characterization of Peptide Ligands against WDR5.
Molecules, 26, 2021

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