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PDB: 42289 件

6PCQ
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E. coli 50S ribosome bound to VM2
分子名称: (3R,4R,5E,10E,12E,14S,26aR)-14-hydroxy-4,12-dimethyl-3-(propan-2-yl)-8,9,14,15,24,25,26,26a-octahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,16,22(4H,17H)-tetrone, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-18
公開日2020-06-17
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
6V7Y
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BU of 6v7y by Molmil
Human CD1d presenting alpha-Galactosylceramide in complex with VHH nanobody 1D5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d, ...
著者Shahine, A, Rossjohn, J.
登録日2019-12-10
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A single-domain bispecific antibody targeting CD1d and the NKT T-cell receptor induces a potent antitumor response.
Nat Cancer, 2020
8B27
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BU of 8b27 by Molmil
Dihydroprecondylocarpine acetate synthase from Catharanthus roseus
分子名称: Dehydroprecondylocarpine acetate synthase, SULFATE ION
著者Langley, C, Basquin, J, Caputi, L, O'Connor, S.E.
登録日2022-09-13
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism.
Angew.Chem.Int.Ed.Engl., 61, 2022
8SJ1
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BU of 8sj1 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound 3'-dATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
著者Wu, S, Sohn, J.
登録日2023-04-17
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SHY
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Structure of binary complex of mouse cGAS QN and bound ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ZINC ION
著者Wu, S, Sohn, J.
登録日2023-04-14
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
7QCQ
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BU of 7qcq by Molmil
VHH Z70 in interaction with PHF6 Tau peptide
分子名称: GLYCEROL, Tau 301-312, VHH Z70
著者Danis, C, Dupre, E, Zejneli, O, Caillierez, R, Arrial, A, Begard, S, Loyens, A, Mortelecque, J, Cantrelle, F.-X, Hanoulle, X, Rain, J.-C, Colin, M, Buee, L, Landrieu, I.
登録日2021-11-25
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Inhibition of Tau seeding by targeting Tau nucleation core within neurons with a single domain antibody fragment.
Mol.Ther., 30, 2022
8SIG
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BU of 8sig by Molmil
Crystal Structure of PRMT4 with Compound YD1-288
分子名称: 5'-{(3-aminopropyl)[2-(benzylcarbamamido)ethyl]amino}-5'-deoxyadenosine, Histone-arginine methyltransferase CARM1, SODIUM ION, ...
著者Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2023-04-16
公開日2024-04-24
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Structure of PRMT4 with Compound YD1-288
To be published
4LH8
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BU of 4lh8 by Molmil
Triazine hydrolase from Arthobacter aurescens modified for maximum expression in E.coli
分子名称: Triazine hydrolase, ZINC ION
著者Jackson, C.J, Coppin, C.W, Alexandrov, A, Wilding, M, Liu, J.-W, Ubels, J, Paks, M, Carr, P.D, Newman, J, Russell, R.J, Field, M, Weik, M, Oakeshott, J.G, Scott, C.
登録日2013-07-01
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献300-Fold increase in production of the Zn2+-dependent dechlorinase TrzN in soluble form via apoenzyme stabilization.
Appl.Environ.Microbiol., 80, 2014
6PFU
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BU of 6pfu by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell
分子名称: Green fluorescent protein, SULFATE ION
著者Chang, J, Romei, M.G, Boxer, S.G.
登録日2019-06-22
公開日2019-08-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.619 Å)
主引用文献Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
3O5C
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BU of 3o5c by Molmil
Cytochrome c Peroxidase BccP of Shewanella oneidensis
分子名称: (R,R)-2,3-BUTANEDIOL, CALCIUM ION, Cytochrome c551 peroxidase, ...
著者Seidel, J, Einsle, O.
登録日2010-07-28
公開日2011-08-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Investigation of the Electron Transport Chain to and the Catalytic Activity of the Diheme Cytochrome c Peroxidase CcpA of Shewanella oneidensis.
Appl.Environ.Microbiol., 77, 2011
7W1S
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BU of 7w1s by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
分子名称: Nanobody Nb-007, Spike protein S1
著者Yang, J, Lin, S, Sun, H.L, Lu, G.W.
登録日2021-11-20
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献A Potent Neutralizing Nanobody Targeting the Spike Receptor-Binding Domain of SARS-CoV-2 and the Structural Basis of Its Intimate Binding.
Front Immunol, 13, 2022
7QG7
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BU of 7qg7 by Molmil
SARS-CoV-2 macrodomain Nsp3b bound to the remdesivir nucleoside GS-441524
分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolane-2-carbonitrile, 1,2-ETHANEDIOL, Papain-like protease nsp3
著者Wollenhaupt, J, Linhard, V, Sreeramulu, S, Weiss, M.S, Schwalbe, H.
登録日2021-12-07
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Binding Adaptation of GS-441524 Diversifies Macro Domains and Downregulates SARS-CoV-2 de-MARylation Capacity.
J.Mol.Biol., 434, 2022
6PCT
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BU of 6pct by Molmil
E. coli 50S ribosome bound to compound 41q
分子名称: (2S)-2-[(3S,4R,5E,10E,12E,14S,26aR)-14-hydroxy-4,12-dimethyl-1,7,16,22-tetraoxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-18
公開日2020-06-17
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
8SHZ
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BU of 8shz by Molmil
Structure of human cGAS
分子名称: Cyclic GMP-AMP synthase, ZINC ION
著者Wu, S, Sohn, J.
登録日2023-04-14
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
4LFG
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BU of 4lfg by Molmil
Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, fully liganded complex;
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Geranylgeranyl Diphosphate Synthase, MAGNESIUM ION
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-06-26
公開日2013-07-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal Structure of Geranylgeranyl Diphosphate Synthase from Streptococcus Uberis 0140J
To be Published
6PED
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BU of 6ped by Molmil
Crystal structure of HEMK2-TRMT112 complex
分子名称: Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-06-20
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of HEMK2-TRMT112 complex
To Be Published
6V9X
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BU of 6v9x by Molmil
Structure of TRPA1 modified by iodoacetamide, PMAL-C8
分子名称: Transient receptor potential cation channel subfamily A member 1
著者Zhao, J, Lin King, J.V, Paulsen, C.E, Cheng, Y, Julius, D.
登録日2019-12-16
公開日2020-05-06
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Irritant-evoked activation and calcium modulation of the TRPA1 receptor.
Nature, 585, 2020
6PKM
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BU of 6pkm by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.17A resolution (#8)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.17 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
8RXB
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BU of 8rxb by Molmil
Human UPF1 CH domain in complex with SMG6 peptide
分子名称: Regulator of nonsense transcripts 1, Telomerase-binding protein EST1A, ZINC ION
著者Langer, L, Basquin, J, Conti, E.
登録日2024-02-06
公開日2024-05-15
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献UPF1 helicase orchestrates mutually exclusive interactions with the SMG6 endonuclease and UPF2.
Nucleic Acids Res., 52, 2024
8ADN
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BU of 8adn by Molmil
Vairimorpha necatrix 20S proteasome from spores
分子名称: Proteasome Inhibitor 31-Like, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
著者Jespersen, N, Ehrenbolger, K, Winiger, R, Svedberg, D, Vossbrinck, C.R, Barandun, J.
登録日2022-07-08
公開日2022-11-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Structure of the reduced microsporidian proteasome bound by PI31-like peptides in dormant spores.
Nat Commun, 13, 2022
6PBU
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BU of 6pbu by Molmil
ClpP1 from Mycobacterium smegmatis
分子名称: ATP-dependent Clp protease proteolytic subunit, MALONATE ION
著者Heras, B, Nagpal, J, Dougan, D.A.
登録日2019-06-14
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular and structural insights into an asymmetric proteolytic complex (ClpP1P2) from Mycobacterium smegmatis.
Sci Rep, 9, 2019
5XYA
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BU of 5xya by Molmil
Crystal structure of a serine protease from Streptococcus species
分子名称: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, CALCIUM ION, Chemokine protease C, ...
著者Jobichen, C, Sivaraman, J.
登録日2017-07-06
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
5XYN
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BU of 5xyn by Molmil
The crystal structure of Csm2-Psy3-Shu1-Shu2 complex from budding yeast
分子名称: Chromosome segregation in meiosis protein 2, Platinum sensitivity protein 3, Suppressor of HU sensitivity involved in recombination protein 1, ...
著者Zhang, S, Zhang, T, Ding, J.
登録日2017-07-09
公開日2017-11-08
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for the functional role of the Shu complex in homologous recombination.
Nucleic Acids Res., 45, 2017
7QU1
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BU of 7qu1 by Molmil
Machupo virus GP1 glycoprotein in complex with Fab fragment of antibody MAC1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab MAC1 heavy chain, Fab MAC1 light chain, ...
著者Ng, W.M, Sahin, M, Krumm, S.A, Seow, J, Zeltina, A, Harlos, K, Paesen, G, Pinschewer, D.D, Doores, K.J, Bowden, T.A.
登録日2022-01-17
公開日2022-02-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Contrasting Modes of New World Arenavirus Neutralization by Immunization-Elicited Monoclonal Antibodies.
Mbio, 13, 2022
6PH2
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Complete LOV domain from the LOV-HK sensory protein from Brucella abortus (mutant C69S, construct 15-155)
分子名称: Blue-light-activated histidine kinase, FLAVIN MONONUCLEOTIDE
著者Rinaldi, J, Otero, L.H, Fernandez, I, Goldbaum, F.A, Shin, H, Yang, X, Klinke, S.
登録日2019-06-25
公開日2020-12-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Dimer Asymmetry and Light Activation Mechanism in Brucella Blue-Light Sensor Histidine Kinase.
Mbio, 12, 2021

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件を2024-07-17に公開中

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