Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 件

5MHQ
DownloadVisualize
BU of 5mhq by Molmil
CCT068127 in complex with CDK2
分子名称: (2~{R},3~{S})-3-[[9-propan-2-yl-6-(pyridin-3-ylmethylamino)purin-2-yl]amino]pentan-2-ol, Cyclin-dependent kinase 2
著者Whittaker, S.R, Barlow, C, Martin, M.P, Mancusi, C, Wagner, S, Barrie, E, te Poele, R, Sharp, S, Brown, N, Wilson, S, Clarke, P, Walton, M.I, MacDonald, E, Blagg, J, Noble, M.E.M, Garrett, M.D, Workman, P.
登録日2016-11-25
公開日2017-12-20
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Molecular profiling and combinatorial activity of CCT068127: a potent CDK2 and CDK9 inhibitor.
Mol Oncol, 12, 2018
5MK9
DownloadVisualize
BU of 5mk9 by Molmil
Maltodextrin binding protein MalE1 from L. casei BL23 bound to beta-cyclodextrin
分子名称: CHLORIDE ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), MalE1
著者Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
登録日2016-12-02
公開日2017-07-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.919 Å)
主引用文献Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017
5MKR
DownloadVisualize
BU of 5mkr by Molmil
HSP72-NBD bound to compound TCI 8 - Tyr15 in up-conformation
分子名称: 3-[(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[(4-chlorophenyl)methylamino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]propyl prop-2-enoate, CITRATE ANION, Heat shock 70 kDa protein 1A
著者Pettinger, J, Westwood, I.M, Cronin, N, Le Bihan, Y.-V, Van Montfort, R.L.M.
登録日2016-12-05
公開日2017-03-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献An Irreversible Inhibitor of HSP72 that Unexpectedly Targets Lysine-56.
Angew. Chem. Int. Ed. Engl., 56, 2017
6IYN
DownloadVisualize
BU of 6iyn by Molmil
Solution structure of camelid nanobody Nb26 against aflatoxin B1
分子名称: Nb26
著者Nie, Y, He, T, Zhu, J, Li, S.L, Hu, R, Yang, Y.H.
登録日2018-12-17
公開日2019-01-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Chemical shift assignments of a camelid nanobody against aflatoxin B1.
Biomol NMR Assign, 13, 2019
2WR4
DownloadVisualize
BU of 2wr4 by Molmil
structure of influenza H2 duck Ontario hemagglutinin with human receptor
分子名称: HEMAGGLUTININ, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Liu, J, Stevens, D.J, Haire, L.F, Walker, P.A, Coombs, P.J, Russell, R.J, Gamblin, S.J, Skehel, J.J.
登録日2009-08-29
公開日2009-09-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From the Cover: Structures of Receptor Complexes Formed by Hemagglutinins from the Asian Influenza Pandemic of 1957.
Proc.Natl.Acad.Sci.USA, 106, 2009
7DCO
DownloadVisualize
BU of 7dco by Molmil
Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom
分子名称: BJ4_G0014900.mRNA.1.CDS.1, BJ4_G0027490.mRNA.1.CDS.1, BJ4_G0037700.mRNA.1.CDS.1, ...
著者Bai, R, Wan, R, Yan, C, Qi, J, Zhang, P, Lei, J, Shi, Y.
登録日2020-10-26
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism of spliceosome remodeling by the ATPase/helicase Prp2 and its coactivator Spp2.
Science, 371, 2021
2OYS
DownloadVisualize
BU of 2oys by Molmil
Crystal Structure of SP1951 protein from Streptococcus pneumoniae in complex with FMN, Northeast Structural Genomics Target SpR27
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, Hypothetical protein SP1951
著者Forouhar, F, Lee, I, Vorobiev, S.M, Janjua, H, Satterwhite, R, Liu, J, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-02-22
公開日2007-03-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Functional insights from structural genomics.
J.Struct.Funct.Genom., 8, 2007
1GJ2
DownloadVisualize
BU of 1gj2 by Molmil
CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
6JT9
DownloadVisualize
BU of 6jt9 by Molmil
Crystal Structure of D464A mutant of FGAM Synthetase
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Sharma, N, Ahalawat, N, Sandhu, P, Mondal, J, Anand, R.
登録日2019-04-10
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of allosteric switches and adaptor domains in long-distance cross-talk and transient tunnel formation.
Sci Adv, 6, 2020
2X1G
DownloadVisualize
BU of 2x1g by Molmil
Crystal structure of Importin13 - Mago-Y14 complex
分子名称: CADMUS, PROTEIN MAGO NASHI, RNA-BINDING PROTEIN 8A
著者Bono, F, Cook, A.G, Gruenwald, M, Ebert, J, Conti, E.
登録日2009-12-23
公開日2010-02-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Nuclear Import Mechanism of the Ejc Component Mago- Y14 Revealed by Structural Studies of Importin 13.
Mol.Cell, 37, 2010
5MN4
DownloadVisualize
BU of 5mn4 by Molmil
S. aureus FtsZ 12-316 F138A GDP Open form (1FOf)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Wagstaff, J.M, Tsim, M, Kureisaite-Ciziene, D, Lowe, J.
登録日2016-12-12
公開日2016-12-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Polymerization-Associated Structural Switch in FtsZ That Enables Treadmilling of Model Filaments.
MBio, 8, 2017
5MNA
DownloadVisualize
BU of 5mna by Molmil
Cationic trypsin in complex with aniline (deuterated sample at 295 K)
分子名称: ANILINE, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2017-05-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.441 Å)
主引用文献Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
2WFN
DownloadVisualize
BU of 2wfn by Molmil
Filamin A actin binding domain
分子名称: FILAMIN-A, SULFATE ION
著者Ruskamo, S, Ylanne, J.
登録日2009-04-09
公開日2009-10-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the Human Filamin a Actin-Binding Domain
Acta Crystallogr.,Sect.D, 65, 2009
5MNG
DownloadVisualize
BU of 5mng by Molmil
Cationic trypsin in complex with benzamidine (deuterated sample at 100 K)
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
2W99
DownloadVisualize
BU of 2w99 by Molmil
Crystal Structure of CDK4 in complex with a D-type cyclin
分子名称: CELL DIVISION PROTEIN KINASE 4, G1/S-SPECIFIC CYCLIN-D1
著者Day, P.J, Cleasby, A, Tickle, I.J, Reilly, M.O, Coyle, J.E, Holding, F.P, McMenamin, R.L, Yon, J, Chopra, R, Lengauer, C, Jhoti, H.
登録日2009-01-22
公開日2009-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Human Cdk4 in Complex with a D-Type Cyclin.
Proc.Natl.Acad.Sci.USA, 106, 2009
5MNP
DownloadVisualize
BU of 5mnp by Molmil
Cationic trypsin in complex with N-amidinopiperidine (at 295 K)
分子名称: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Cationic trypsin in complex with N-amidinopiperidine (at 295 K)
to be published
2VUS
DownloadVisualize
BU of 2vus by Molmil
Crystal structure of unliganded NmrA-AreA zinc finger complex
分子名称: CHLORIDE ION, NITROGEN METABOLITE REPRESSION REGULATOR NMRA, NITROGEN REGULATORY PROTEIN AREA, ...
著者Kotaka, M, Johnson, C, Lamb, H.K, Hawkins, A.R, Ren, J, Stammers, D.K.
登録日2008-05-30
公開日2008-07-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Analysis of the Recognition of the Negative Regulator Nmra and DNA by the Zinc Finger from the Gata-Type Transcription Factor Area.
J.Mol.Biol., 381, 2008
5MNZ
DownloadVisualize
BU of 5mnz by Molmil
Neutron structure of cationic trypsin in its apo form
分子名称: CALCIUM ION, Cationic trypsin
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-13
公開日2018-01-17
最終更新日2024-01-17
実験手法NEUTRON DIFFRACTION (1.45 Å)
主引用文献Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
6JVX
DownloadVisualize
BU of 6jvx by Molmil
Crystal structure of RBM38 in complex with RNA
分子名称: RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*G)-3'), RNA-binding protein 38, SULFATE ION
著者Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
登録日2019-04-17
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
2VXY
DownloadVisualize
BU of 2vxy by Molmil
The structure of FTsZ from Bacillus subtilis at 1.7A resolution
分子名称: CELL DIVISION PROTEIN FTSZ, CITRIC ACID, POTASSIUM ION
著者Barynin, V.V, Baker, P.J, Rice, D.W, Sedelnikova, S.E, Haydon, D.J, Stokes, N.R, Ure, R, Galbraith, G, Bennett, J.M, Brown, D.R, Heal, J.R, Sheridan, J.M, Aiwale, S.T, Chauhan, P.K, Srivastava, A, Taneja, A, Collins, I, Errington, J, Czaplewski, L.G.
登録日2008-07-15
公開日2008-09-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An Inhibitor of Ftsz with Potent and Selective Anti-Staphylococcal Activity.
Science, 321, 2008
4EAM
DownloadVisualize
BU of 4eam by Molmil
1.70A resolution structure of apo beta-glycosidase (W33G) from sulfolobus solfataricus
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-galactosidase, ...
著者Lovell, S, Battaile, K.P, Deckert, K, Brunner, L.C, Budiardjo, S.J, Karanicolas, J.
登録日2012-03-22
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Designing allosteric control into enzymes by chemical rescue of structure.
J.Am.Chem.Soc., 134, 2012
2W90
DownloadVisualize
BU of 2w90 by Molmil
Geobacillus stearothermophilus 6-phosphogluconate dehydrogenase with bound 6- phosphogluconate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, ...
著者Cameron, S, Martini, V.P, Iulek, J, Hunter, W.N.
登録日2009-01-20
公開日2009-04-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Geobacillus Stearothermophilus 6-Phosphogluconate Dehydrogenase, Complexed with 6-Phosphogluconate.
Acta Crystallogr.,Sect.F, 65, 2009
6K1D
DownloadVisualize
BU of 6k1d by Molmil
Crystal structure of EXD2 exonuclease domain soaked in Mn and GMP
分子名称: Exonuclease 3'-5' domain-containing protein 2, MANGANESE (II) ION
著者Park, J, Lee, C.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Nucleic Acids Res., 47, 2019
5MON
DownloadVisualize
BU of 5mon by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with 2-aminopyridine
分子名称: 2-AMINOPYRIDINE, CALCIUM ION, Cationic trypsin, ...
著者Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
登録日2016-12-14
公開日2017-05-24
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (0.939 Å), X-RAY DIFFRACTION
主引用文献Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
6JXA
DownloadVisualize
BU of 6jxa by Molmil
Tel1 kinase compact monomer
分子名称: Serine/threonine-protein kinase TEL1
著者Xin, J.
登録日2019-04-23
公開日2019-07-03
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of allosteric regulation of Tel1/ATM kinase.
Cell Res., 29, 2019

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon