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PDB: 42550 件

1IPE
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TROPINONE REDUCTASE-II COMPLEXED WITH NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TROPINONE REDUCTASE-II
著者Yamashita, A, Endo, M, Higashi, T, Nakatsu, T, Yamada, Y, Oda, J, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-05-09
公開日2003-06-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Capturing Enzyme Structure Prior to Reaction Initiation: Tropinone Reductase-II-Substrate Complexes
BIOCHEMISTRY, 42, 2003
2RGW
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BU of 2rgw by Molmil
Catalytic Subunit of M. jannaschii Aspartate Transcarbamoylase
分子名称: Aspartate carbamoyltransferase, SULFATE ION
著者Vitali, J, Colaneri, M.J, Kantrowitz, E.R.
登録日2007-10-05
公開日2008-10-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the catalytic trimer of Methanococcus jannaschii aspartate transcarbamoylase.
Proteins, 71, 2008
2RFT
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BU of 2rft by Molmil
Crystal structure of influenza B virus hemagglutinin in complex with LSTa receptor analog
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Influenza B hemagglutinin (HA), ...
著者Wang, Q, Tian, X, Chen, X, Ma, J.
登録日2007-10-01
公開日2008-02-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for receptor specificity of influenza B virus hemagglutinin.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6IK4
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BU of 6ik4 by Molmil
A Novel M23 Metalloprotease Pseudoalterin from Deep-sea
分子名称: Elastinolytic metalloprotease, GLYCEROL, ZINC ION
著者Zhao, H.L, Tang, B.L, Yang, J, Chen, X.L, Zhang, Y.Z.
登録日2018-10-14
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A predator-prey interaction between a marine Pseudoalteromonas sp. and Gram-positive bacteria.
Nat Commun, 11, 2020
5KQU
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BU of 5kqu by Molmil
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
分子名称: 4-aminobutyrate transaminase, PYRIDOXAL-5'-PHOSPHATE
著者Wilding, M, Newman, J, Peat, T.S, Scott, C.
登録日2016-07-06
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Green Chemistry, 19, 2017
7E2R
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BU of 7e2r by Molmil
The ligand-free structure of Arabidopsis thaliana GUN4
分子名称: Tetrapyrrole-binding protein, chloroplastic
著者Liu, L, Hu, J.
登録日2021-02-07
公開日2021-08-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.
Protein Sci., 30, 2021
5KRM
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Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the A-CD ring estrogen, (1S,7aS)-5-(2,5-difluoro-4-hydroxyphenyl)-7a-methyl-2,3,3a,4,7,7a-hexahydro-1H-inden-1-ol
分子名称: (1~{S},3~{a}~{R},7~{a}~{S})-5-[2,5-bis(fluoranyl)-4-oxidanyl-phenyl]-7~{a}-methyl-1,2,3,3~{a},4,7-hexahydroinden-1-ol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-01-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
6IP4
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BU of 6ip4 by Molmil
Crystal structure of Arabidopsis thaliana JMJ13 catalytic domain in complex with NOG and an H3K27me3 peptide
分子名称: Arabidopsis JMJ13, Histone H3.2, N-OXALYLGLYCINE, ...
著者Hu, H, Du, J.
登録日2018-11-02
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Nat Commun, 10, 2019
5KSR
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Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger).
分子名称: 5'-nucleotidase SurE, CHLORIDE ION, IODIDE ION, ...
著者Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A, Polikarpov, I, De Souza, A.P, De Aparicio, R, Iulek, J.
登録日2016-07-09
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
2RIR
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BU of 2rir by Molmil
Crystal structure of dipicolinate synthase, A chain, from Bacillus subtilis
分子名称: CHLORIDE ION, Dipicolinate synthase, A chain, ...
著者Osipiuk, J, Quartey, P, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-10-12
公開日2007-10-23
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal structure of dipicolinate synthase, A chain, from Bacillus subtilis.
To be Published
2RMM
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BU of 2rmm by Molmil
Solution structure of GB1 A34F mutant
分子名称: Immunoglobulin G-binding protein G
著者Jee, J, Byeon, I, Louis, J.M, Gronenborn, A.M.
登録日2007-10-30
公開日2007-12-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of GB1 A34F mutant
To be Published
2RO3
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BU of 2ro3 by Molmil
RDC-refined Solution Structure of the N-terminal DNA Recognition Domain of the Bacillus subtilis Transition-state Regulator Abh
分子名称: Putative transition state regulator abh
著者Sullivan, D.M, Bobay, B.G, Douglas, K.J, Thompson, R.J, Rance, M, Strauch, M.A, Cavanagh, J.
登録日2008-03-08
公開日2008-11-11
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Insights into the nature of DNA binding of AbrB-like transcription factors
Structure, 16, 2008
5KQL
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BU of 5kql by Molmil
Co-crystal structure of LMW-PTP in complex with 2-oxo-1-phenyl-2-(phenylamino)ethanesulfonic acid
分子名称: (1~{S})-2-oxidanylidene-1-phenyl-2-phenylazanyl-ethanesulfonic acid, Low molecular weight phosphotyrosine protein phosphatase
著者Wang, J, Zhang, Z.-Y, Yu, Z.-H.
登録日2016-07-06
公開日2016-10-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Inhibition of low molecular weight protein tyrosine phosphatase by an induced-fit mechanism.
J.Med.Chem., 2016
2RM5
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BU of 2rm5 by Molmil
Glutathione peroxidase-type tryparedoxin peroxidase, oxidized form
分子名称: Glutathione peroxidase-like protein
著者Melchers, J, Feher, K, Diechtierow, M, Krauth-Siegel, L, Tews, I, Muhle-Goll, C.
登録日2007-10-03
公開日2008-07-29
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Structural basis for a distinct catalytic mechanism in Trypanosoma brucei tryparedoxin peroxidase
J.Biol.Chem., 283, 2008
5KQP
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BU of 5kqp by Molmil
Crystal structure of Apo-form LMW-PTP
分子名称: Low molecular weight phosphotyrosine protein phosphatase
著者Wang, J, Zhang, Z.-Y, Yu, Z.-H.
登録日2016-07-06
公開日2016-10-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献Inhibition of low molecular weight protein tyrosine phosphatase by an induced-fit mechanism.
J.Med.Chem., 2016
5KR9
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BU of 5kr9 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with Coumestrol
分子名称: Coumestrol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-02-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
2R5H
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BU of 2r5h by Molmil
Pentamer structure of Major Capsid Protein L1 of Human Papilloma Virus type 16
分子名称: Late major capsid protein L1
著者Bishop, B, Dasgupta, J, Chen, X.S.
登録日2007-09-03
公開日2008-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal structures of four types of human papillomavirus L1 capsid proteins: understanding the specificity of neutralizing monoclonal antibodies.
J.Biol.Chem., 282, 2007
5KRK
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BU of 5krk by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with 4,4'-((5-bromo-2,3-dihydro-1H-inden-1-ylidene)methylene)diphenol
分子名称: 4-[(5-bromanyl-2,3-dihydroinden-1-ylidene)-(4-hydroxyphenyl)methyl]phenol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
登録日2016-07-07
公開日2017-01-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.391 Å)
主引用文献Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
2RBG
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BU of 2rbg by Molmil
Crystal structure of hypothetical protein(ST0493) from sulfolobus tokodaii
分子名称: Putative uncharacterized protein ST0493, SULFATE ION
著者Jeyakanthan, J, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-09-19
公開日2008-09-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of hypothetical protein(ST0493) from sulfolobus tokodaii
To be Published
5KYY
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Crystal structure of Sec23 and TANGO1 peptide4 complex
分子名称: Protein transport protein Sec23A, Protein transport protein Sec24D, ZINC ION
著者Ma, W, Goldberg, J.
登録日2016-07-22
公開日2016-09-07
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (3.403 Å)
主引用文献TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
2R5J
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BU of 2r5j by Molmil
Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus Type 35
分子名称: Major capsid protein L1
著者Bishop, B, Dasgupta, J, Chen, X.S.
登録日2007-09-03
公開日2008-05-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structures of four types of human papillomavirus L1 capsid proteins: understanding the specificity of neutralizing monoclonal antibodies.
J.Biol.Chem., 282, 2007
6ISB
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BU of 6isb by Molmil
crystal structure of human CD226
分子名称: CD226 antigen
著者Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
登録日2018-11-16
公開日2018-12-26
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
2R8Q
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Structure of LmjPDEB1 in complex with IBMX
分子名称: 3-ISOBUTYL-1-METHYLXANTHINE, Class I phosphodiesterase PDEB1, MAGNESIUM ION, ...
著者Wang, H, Yan, Z, Geng, J, Kunz, S, Seebeck, T, Ke, H.
登録日2007-09-11
公開日2007-12-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the Leishmania major phosphodiesterase LmjPDEB1 and insight into the design of the parasite-selective inhibitors.
Mol.Microbiol., 66, 2007
5KYX
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crystal structure of Sec23 and TANGO1 peptide1 complex
分子名称: Protein transport protein Sec23A, Protein transport protein Sec24D, ZINC ION
著者Ma, W, Goldberg, J.
登録日2016-07-22
公開日2016-09-07
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (3.516 Å)
主引用文献TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
2RIB
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BU of 2rib by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with L-glycero-D-manno-heptose
分子名称: CALCIUM ION, L-glycero-alpha-D-manno-heptopyranose, Pulmonary surfactant-associated protein D
著者Wang, H, Head, J, Kosma, P, Sheikh, S, McDonald, B, Smith, K, Cafarella, T, Seaton, B, Crouch, E.
登録日2007-10-10
公開日2008-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d.
Biochemistry, 47, 2008

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