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PDB: 23 results

1K85
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Solution structure of the fibronectin type III domain from Bacillus circulans WL-12 Chitinase A1.
Descriptor: CHITINASE A1
Authors:Jee, J.G, Ikegami, T, Hashimoto, M, Kawabata, T, Ikeguchi, M, Watanabe, T, Shirakawa, M.
Deposit date:2001-10-23
Release date:2002-12-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution Structure of the Fibronectin Type III Domain from Bacillus circulans WL-12 Chitinase A1
J.Biol.Chem., 277, 2002
2RMM
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BU of 2rmm by Molmil
Solution structure of GB1 A34F mutant
Descriptor: Immunoglobulin G-binding protein G
Authors:Jee, J, Byeon, I, Louis, J.M, Gronenborn, A.M.
Deposit date:2007-10-30
Release date:2007-12-04
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structure of GB1 A34F mutant
To be Published
2RQQ
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BU of 2rqq by Molmil
Structure of C-terminal region of Cdt1
Descriptor: DNA replication factor Cdt1
Authors:Jee, J.G, Mizuno, T, Kamada, K, Tochio, H, Hiroaki, H, Hanaoka, F, Shirakawa, M.
Deposit date:2009-10-14
Release date:2010-03-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure and mutagenesis studies of the C-terminal region of licensing factor Cdt1 enable the identification of key residues for binding to replicative helicase Mcm proteins
J.Biol.Chem., 285, 2010
1IG4
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BU of 1ig4 by Molmil
Solution Structure of the Methyl-CpG-Binding Domain of Human MBD1 in Complex with Methylated DNA
Descriptor: 5'-D(*GP*TP*AP*TP*CP*(5CM)P*GP*GP*AP*TP*AP*C)-3', Methyl-CpG Binding Protein
Authors:Ohki, I, Shimotake, N, Fujita, N, Jee, J.-G, Ikegami, T, Nakao, M, Shirakawa, M.
Deposit date:2001-04-17
Release date:2001-05-30
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of the methyl-CpG binding domain of human MBD1 in complex with methylated DNA.
Cell(Cambridge,Mass.), 105, 2001
2D07
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BU of 2d07 by Molmil
Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase
Descriptor: G/T mismatch-specific thymine DNA glycosylase, Ubiquitin-like protein SMT3B
Authors:Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M.
Deposit date:2005-07-26
Release date:2006-06-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase
J.Mol.Biol., 359, 2006
2D2P
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BU of 2d2p by Molmil
The solution structure of micelle-bound peptide
Descriptor: Pituitary adenylate cyclase activating polypeptide-38
Authors:Tateishi, Y, Jee, J.G, Inooka, H, Tochio, H, Hiroaki, H, Shirakawa, M.
Deposit date:2005-09-14
Release date:2006-09-26
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The solution structure of micelle-bound peptide
To be Published
1WR1
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BU of 1wr1 by Molmil
The complex structure of Dsk2p UBA with ubiquitin
Descriptor: Ubiquitin, Ubiquitin-like protein DSK2
Authors:Ohno, A, Jee, J.G, Fujiwara, K, Tenno, T, Goda, N, Tochio, H, Hiroaki, H, kobayashi, H, Shirakawa, M.
Deposit date:2004-10-08
Release date:2005-04-19
Last modified:2023-09-27
Method:SOLUTION NMR
Cite:Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition.
Structure, 13, 2005
2L2F
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BU of 2l2f by Molmil
NMR Structure of GzCVNH (Gibberella zeae CVNH)
Descriptor: Cyanovirin-N HOMOLOG
Authors:Matei, E, Louis, J.M, Jee, J.G, Gronenborn, A.M.
Deposit date:2010-08-17
Release date:2011-03-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR solution structure of a cyanovirin homolog from wheat head blight fungus.
Proteins, 79, 2011
1J0S
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BU of 1j0s by Molmil
Solution structure of the human interleukin-18
Descriptor: Interleukin-18
Authors:Kato, Z, Jee, J, Shikano, H, Mishima, M, Ohki, I, Yoneda, T, Hara, T, Torigoe, K, Kondo, N, Shirakawa, M.
Deposit date:2002-11-21
Release date:2003-11-11
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The structure and binding mode of interleukin-18
Nat.Struct.Biol., 10, 2003
1UEL
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BU of 1uel by Molmil
Solution structure of ubiquitin-like domain of hHR23B complexed with ubiquitin-interacting motif of proteasome subunit S5a
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, UV excision repair protein RAD23 homolog B
Authors:Fujiwara, K, Tenno, T, Jee, J.G, Sugasawa, K, Ohki, I, Kojima, C, Tochio, H, Hiroaki, H, Hanaoka, H, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-19
Release date:2004-02-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B
J.Biol.Chem., 279, 2004
1UGL
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BU of 1ugl by Molmil
Solution structure of S8-SP11
Descriptor: S-locus pollen protein
Authors:Mishima, M, Takayama, S, Sasaki, K, Jee, J.G, Kojima, C, Isogai, A, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-16
Release date:2003-09-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of the Male Determinant Factor for Brassica Self-incompatibility
J.Biol.Chem., 278, 2003
2JZJ
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BU of 2jzj by Molmil
Structure of CrCVNH (C. richardii CVNH)
Descriptor: Cyanovirin-N homolog
Authors:Koharudin, L.M.I, Viscomi, A.R, Jee, J, Ottonello, S, Gronenborn, A.M.
Deposit date:2008-01-09
Release date:2008-03-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity.
Structure, 16, 2008
2JZL
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Structure of NcCVNH (N. CRASSA CVNH)
Descriptor: Cyanovirin-N homolog
Authors:Koharudin, L.M.I, Viscomi, A.R, Jee, J, Ottonello, S, Gronenborn, A.M.
Deposit date:2008-01-09
Release date:2008-03-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity.
Structure, 16, 2008
2JZK
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BU of 2jzk by Molmil
Structure of TbCVNH (T. BORCHII CVNH)
Descriptor: Cyanovirin-N homolog
Authors:Koharudin, L.M.I, Viscomi, A.R, Jee, J, Ottonello, S, Gronenborn, A.M.
Deposit date:2008-01-09
Release date:2008-03-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity.
Structure, 16, 2008
1WYW
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BU of 1wyw by Molmil
Crystal Structure of SUMO1-conjugated thymine DNA glycosylase
Descriptor: CHLORIDE ION, G/T mismatch-specific thymine DNA glycosylase, MAGNESIUM ION, ...
Authors:Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M.
Deposit date:2005-02-17
Release date:2005-06-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thymine DNA glycosylase conjugated to SUMO-1.
Nature, 435, 2005
1WR0
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BU of 1wr0 by Molmil
Structural characterization of the MIT domain from human Vps4b
Descriptor: SKD1 protein
Authors:Takasu, H, Jee, J.G, Ohno, A, Goda, N, Fujiwara, K, Tochio, H, Shirakawa, M, Hiroaki, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-10-07
Release date:2005-08-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural characterization of the MIT domain from human Vps4b
Biochem.Biophys.Res.Commun., 334, 2005
2RRD
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BU of 2rrd by Molmil
Structure of HRDC domain from human Bloom syndrome protein, BLM
Descriptor: HRDC domain from Bloom syndrome protein
Authors:Sato, A, Mishima, M, Nagai, A, Kim, S.Y, Ito, Y, Hakoshima, T, Jee, J.G, Kitano, K.
Deposit date:2010-07-19
Release date:2010-09-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the HRDC domain of human Bloom syndrome protein BLM
J.Biochem., 148, 2010
2RRR
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BU of 2rrr by Molmil
DNA oligomer containing ethylene cross-linked cyclic 2'-deoxyuridylate dimer
Descriptor: DNA (5'-D(*CP*CP*TP*TP*CP*AP*TP*TP*AP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*GP*TP*AP*AP*TP*GP*AP*AP*GP*G)-3')
Authors:Furuita, K, Murata, S, Jee, J.G, Ichikawa, S, Matsuda, A, Kojima, C.
Deposit date:2011-03-24
Release date:2011-06-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural Feature of Bent DNA Recognized by HMGB1
J.Am.Chem.Soc., 133, 2011
2RR3
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BU of 2rr3 by Molmil
Solution structure of the complex between human VAP-A MSP domain and human OSBP FFAT motif
Descriptor: Oxysterol-binding protein 1, Vesicle-associated membrane protein-associated protein A
Authors:Furuita, K, Jee, J, Fukada, H, Mishima, M, Kojima, C.
Deposit date:2010-03-09
Release date:2010-03-23
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Electrostatic interaction between oxysterol-binding protein and VAMP-associated protein A revealed by NMR and mutagenesis studies
J.Biol.Chem., 285, 2010
2RRQ
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BU of 2rrq by Molmil
DNA oligomer containing propylene cross-linked cyclic 2'-deoxyuridylate dimer
Descriptor: DNA (5'-D(*CP*CP*TP*TP*CP*AP*(JDT)P*TP*AP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*GP*TP*AP*AP*TP*GP*AP*AP*GP*G)-3')
Authors:Furuita, K, Murata, S, Jee, J.G, Ichikawa, S, Matsuda, A, Kojima, C.
Deposit date:2011-03-24
Release date:2011-06-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Feature of Bent DNA Recognized by HMGB1
J.Am.Chem.Soc., 133, 2011
2RS4
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BU of 2rs4 by Molmil
NMR structure of stereo-array isotope labelled (SAIL) peptidyl-prolyl cis-trans isomerase from E. coli (EPPIb)
Descriptor: Peptidyl-prolyl cis-trans isomerase B
Authors:Takeda, M, Jee, J, Ono, A.M, Okuma, K, Terauchi, T, Kainosho, M.
Deposit date:2011-07-16
Release date:2011-10-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Hydrogen exchange study on the hydroxyl groups of serine and threonine residues in proteins and structure refinement using NOE restraints with polar side-chain groups
J.Am.Chem.Soc., 133, 2011
2RR9
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The solution structure of the K63-Ub2:tUIMs complex
Descriptor: Putative uncharacterized protein UIMC1, ubiquitin
Authors:Sekiyama, N, Jee, J, Isogai, S, Akagi, K, Huang, T, Ariyoshi, M, Tochio, H, Shirakawa, M.
Deposit date:2010-06-16
Release date:2011-07-06
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The solution structure of the K63-Ub2:tUIMs complex
To be Published
2RM8
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BU of 2rm8 by Molmil
The solution structure of phototactic transducer protein HtrII linker region from Natronomonas pharaonis
Descriptor: Sensory rhodopsin II transducer
Authors:Hayashi, K, Sudo, Y, Jee, J, Mishima, M, Hara, H, Kamo, N, Kojima, C.
Deposit date:2007-10-15
Release date:2007-12-04
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structural Analysis of the Phototactic Transducer Protein HtrII Linker Region from Natronomonas pharaonis
Biochemistry, 46, 2007

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