Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 results

2A43
DownloadVisualize
BU of 2a43 by Molmil
Crystal Structure of a Luteoviral RNA Pseudoknot and Model for a Minimal Ribosomal Frameshifting Motif
Descriptor: MAGNESIUM ION, RNA Pseudoknot
Authors:Pallan, P.S, Marshall, W.S, Harp, J, Jewett III, F.C, Wawrzak, Z, Brown II, B.A, Rich, A, Egli, M.
Deposit date:2005-06-27
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal Structure of a Luteoviral RNA Pseudoknot and Model for a Minimal Ribosomal Frameshifting Motif
Biochemistry, 44, 2005
2ABM
DownloadVisualize
BU of 2abm by Molmil
Crystal Structure of Aquaporin Z Tetramer Reveals both Open and Closed Water-conducting Channels
Descriptor: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-O-octyl-beta-D-glucopyranose, ...
Authors:Jiang, J, Daniels, B.V, Fu, D.
Deposit date:2005-07-15
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of AqpZ Tetramer Reveals Two Distinct Arg-189 Conformations Associated with Water Permeation through the Narrowest Constriction of the Water-conducting Channel.
J.Biol.Chem., 281, 2006
2AAV
DownloadVisualize
BU of 2aav by Molmil
Solution NMR structure of Filamin A domain 17
Descriptor: Filamin A
Authors:Nakamura, F, Pudas, R, Heikkinen, O, Permi, P, Kilpelainen, I, Munday, A.D, Hartwig, J.H, Stossel, T.P, Ylanne, J.
Deposit date:2005-07-14
Release date:2006-05-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The structure of the GPIb-filamin A complex
Blood, 107, 2006
3TQC
DownloadVisualize
BU of 3tqc by Molmil
Structure of the pantothenate kinase (coaA) from Coxiella burnetii
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Pantothenate kinase
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TQE
DownloadVisualize
BU of 3tqe by Molmil
Structure of the malonyl CoA-acyl carrier protein transacylase (fabD) from Coxiella burnetii
Descriptor: 1,2-ETHANEDIOL, GLYCINE, Malonyl-CoA-[acyl-carrier-protein] transacylase
Authors:Franklin, M.C, Cheung, J, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-21
Last modified:2016-01-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TQY
DownloadVisualize
BU of 3tqy by Molmil
Structure of a single-stranded DNA-binding protein (ssb), from Coxiella burnetii
Descriptor: Single-stranded DNA-binding protein
Authors:Cheung, J, Franklin, M.C, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6001 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3TRF
DownloadVisualize
BU of 3trf by Molmil
Structure of a shikimate kinase (aroK) from Coxiella burnetii
Descriptor: SULFATE ION, Shikimate kinase
Authors:Cheung, J, Franklin, M, Rudolph, M, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3UCD
DownloadVisualize
BU of 3ucd by Molmil
Asymmetric complex of human neuron specific enolase-2-PGA/PEP
Descriptor: 2-PHOSPHOGLYCERIC ACID, Gamma-enolase, MAGNESIUM ION, ...
Authors:Qin, J, Chai, G, Brewer, J, Lovelace, L, Lebioda, L.
Deposit date:2011-10-26
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structures of asymmetric complexes of human neuron specific enolase with resolved substrate and product and an analogous complex with two inhibitors indicate subunit interaction and inhibitor cooperativity.
J.Inorg.Biochem., 111, 2012
5JXD
DownloadVisualize
BU of 5jxd by Molmil
Crystal structure of murine Tnfaip8 C165S mutant
Descriptor: Tumor necrosis factor alpha-induced protein 8, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Park, J, Kim, M.S, Lee, D, Shin, D.H.
Deposit date:2016-05-13
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.029 Å)
Cite:The Tnfaip8-PE complex is a novel upstream effector in the anti-autophagic action of insulin
Sci Rep, 7, 2017
1HQU
DownloadVisualize
BU of 1hqu by Molmil
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Descriptor: (S)-4-ISOPROPOXYCARBONYL-6-METHOXY-3-METHYLTHIOMETHYL-3,4-DIHYDROQUINOXALIN-2(1H)-THIONE, POL POLYPROTEIN
Authors:Hsiou, Y, Ding, J, Arnold, E.
Deposit date:2000-12-19
Release date:2001-05-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Lys103Asn mutation of HIV-1 RT: a novel mechanism of drug resistance.
J.Mol.Biol., 309, 2001
6HNN
DownloadVisualize
BU of 6hnn by Molmil
Crystal structure of wild-type IdmH, a putative polyketide cyclase from Streptomyces antibioticus
Descriptor: Putative polyketide cyclase IdmH
Authors:Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
Deposit date:2018-09-16
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
1CJ1
DownloadVisualize
BU of 1cj1 by Molmil
GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN (HUMAN) COMPLEXED WITH A PHOSPHOTYROSYL DERIVATIVE
Descriptor: PROTEIN (GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2), [1-[1-(6-CARBAMOYL-CYCLOHEX-2-ENYLCARBAMOYL)-CYCLOHEXYLCARBAMOYL]-2-(4-PHOSPHONOOXY-PHENYL)- ETHYL]-CARBAMIC ACID 3-AMINOBENZYLESTER
Authors:Rahuel, J.
Deposit date:1999-04-21
Release date:1999-12-22
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based design, synthesis, and X-ray crystallography of a high-affinity antagonist of the Grb2-SH2 domain containing an asparagine mimetic.
J.Med.Chem., 42, 1999
5KBV
DownloadVisualize
BU of 5kbv by Molmil
Cryo-EM structure of GluA2 bound to antagonist ZK200775 at 6.8 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid
Authors:Twomey, E.C, Yelshanskaya, M.V, Grassucci, R.G, Frank, J, Sobolevsky, A.I.
Deposit date:2016-06-03
Release date:2016-07-13
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Elucidation of AMPA receptor-stargazin complexes by cryo-electron microscopy.
Science, 353, 2016
1HT1
DownloadVisualize
BU of 1ht1 by Molmil
Nucleotide-Dependent Conformational Changes in a Protease-Associated ATPase HslU
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HEAT SHOCK LOCUS HSLU, HEAT SHOCK LOCUS HSLV
Authors:Wang, J, Song, J.J, Seong, I.S, Franklin, M.C, Kamtekar, S, Eom, S.H, Chung, C.H.
Deposit date:2000-12-27
Release date:2001-11-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nucleotide-dependent conformational changes in a protease-associated ATPase HsIU.
Structure, 9, 2001
2QSW
DownloadVisualize
BU of 2qsw by Molmil
Crystal structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis
Descriptor: GLYCEROL, Methionine import ATP-binding protein metN 2, ZINC ION
Authors:Osipiuk, J, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-31
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis.
To be Published
5K2I
DownloadVisualize
BU of 5k2i by Molmil
Crystal structure of Oxidized Prx3 from Vibrio vulnificus
Descriptor: 1-Cys peroxiredoxin
Authors:Ahn, J, Ha, N.-C.
Deposit date:2016-05-19
Release date:2017-05-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Crystal structure of peroxiredoxin 3 fromVibrio vulnificusand its implications for scavenging peroxides and nitric oxide.
IUCrJ, 5, 2018
2QT7
DownloadVisualize
BU of 2qt7 by Molmil
Crystallographic structure of the mature ectodomain of the human receptor-type protein-tyrosine phosphatase IA-2 at 1.30 Angstroms
Descriptor: CALCIUM ION, Receptor-type tyrosine-protein phosphatase-like N
Authors:Primo, M.E, Klinke, S, Sica, M.P, Goldbaum, F.A, Jakoncic, J, Poskus, E, Ermacora, M.R.
Deposit date:2007-08-01
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the Mature Ectodomain of the Human Receptor-type Protein-tyrosine Phosphatase IA-2
J.Biol.Chem., 283, 2008
1CQ8
DownloadVisualize
BU of 1cq8 by Molmil
ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C6-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, ASPARTATE AMINOTRANSFERASE (2.6.1.1)
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
6HXX
DownloadVisualize
BU of 6hxx by Molmil
Potato virus Y
Descriptor: Coat protein, RNA (5'-R(P*UP*UP*UP*UP*U)-3')
Authors:Podobnik, M, Kezar, A, Novacek, J, Polak, M.
Deposit date:2018-10-18
Release date:2019-08-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for the multitasking nature of the potato virus Y coat protein.
Sci Adv, 5, 2019
2QUY
DownloadVisualize
BU of 2quy by Molmil
Truncated mutant ASN175ALA of penicillin v acylase from bacillus sphaericus
Descriptor: CHLORIDE ION, Penicillin acylase
Authors:Pathak, M.C, Brannigan, J, Dodson, G.G, Suresh, C.G.
Deposit date:2007-08-07
Release date:2008-08-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Auto-proteolytic processing of Penicillin V Acylase is simpler than of other related Ntn hydrolases
To be Published
5OPT
DownloadVisualize
BU of 5opt by Molmil
Structure of KSRP in context of Trypanosoma cruzi 40S
Descriptor: 18S rRNA, 40S ribosomal protein S10, putative, ...
Authors:Brito Querido, J, Mancera-Martinez, E, Vicens, Q, Bochler, A, Chicher, J, Simonetti, A, Hashem, Y.
Deposit date:2017-08-10
Release date:2017-11-15
Last modified:2017-12-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The cryo-EM Structure of a Novel 40S Kinetoplastid-Specific Ribosomal Protein.
Structure, 25, 2017
2QTO
DownloadVisualize
BU of 2qto by Molmil
An anisotropic model for potassium channel KcsA
Descriptor: POTASSIUM ION, Voltage-gated potassium channel
Authors:Chen, X, Poon, B.K, Dousis, A, Wang, Q, Ma, J.
Deposit date:2007-08-02
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Normal-mode refinement of anisotropic thermal parameters for potassium channel KcsA at 3.2 A crystallographic resolution
Structure, 15, 2007
2QV8
DownloadVisualize
BU of 2qv8 by Molmil
Structure of the minor pseudopilin EpsH from the Type 2 Secretion System of Vibrio cholerae
Descriptor: General secretion pathway protein H
Authors:Yanez, M.E, Korotkov, K.V, Abendroth, J, Hol, W.G.J.
Deposit date:2007-08-07
Release date:2008-02-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the minor pseudopilin EpsH from the Type 2 secretion system of Vibrio cholerae.
J.Mol.Biol., 377, 2008
2QAI
DownloadVisualize
BU of 2qai by Molmil
Crystal structure of the V-type ATP synthase subunit F from Pyrococcus furiosus. NESG target PfR7.
Descriptor: V-type ATP synthase subunit F
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Ma, L.-C, Shih, L, Fang, Y, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-06-15
Release date:2007-06-26
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the V-type ATP synthase subunit F from Pyrococcus furiosus.
To be Published
5JVW
DownloadVisualize
BU of 5jvw by Molmil
Crystal structure of mithramycin analogue MTM SA-Trp in complex with a 10-mer DNA AGAGGCCTCT.
Descriptor: DNA (5'-D(*AP*GP*AP*GP*GP*CP*CP*TP*CP*T)-3'), Plicamycin, mithramycin analogue MTM SA-Trp, ...
Authors:Hou, C, Rohr, J, Tsodikov, O.V.
Deposit date:2016-05-11
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of mithramycin analogues bound to DNA and implications for targeting transcription factor FLI1.
Nucleic Acids Res., 44, 2016

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon