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PDB: 42880 results

8SHU
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BU of 8shu by Molmil
Structure of mouse cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-14
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
2IZZ
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BU of 2izz by Molmil
Crystal structure of human pyrroline-5-carboxylate reductase
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRROLINE-5-CARBOXYLATE REDUCTASE 1
Authors:Pike, A.C.W, Guo, K, Kavanagh, K, Pilka, E.S, Berridge, G, Colebrook, S, Bray, J, Salah, E, Savitsky, P, Papagrigoriou, E, Turnbull, A.P, von Delft, F, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Oppermann, U.
Deposit date:2006-07-31
Release date:2006-08-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Human Pyrroline-5-Carboxylate Reductase
To be Published
7QCJ
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BU of 7qcj by Molmil
Structure of SARS-CoV-2 Papain-like Protease bound to N-(2,4-dihydroxybenzylidene)-thiosemicarbazone
Descriptor: CHLORIDE ION, GLYCEROL, N-(2,4-dihydroxybenzylidene)-thiosemicarbazone, ...
Authors:Ewert, W, Gunther, S, Reinke, P, Falke, S, Lieske, J, Miglioli, F, Carcelli, M, Srinivasan, V, Betzel, C, Han, H, Lorenzen, K, Guenther, C, Niebling, S, Garcia-Alai, M, Hinrichs, W, Rogolino, D, Meents, A.
Deposit date:2021-11-24
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Hydrazones and Thiosemicarbazones Targeting Protein-Protein-Interactions of SARS-CoV-2 Papain-like Protease.
Front Chem, 10, 2022
2IUT
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BU of 2iut by Molmil
P. aeruginosa FtsK motor domain, dimeric
Descriptor: DNA TRANSLOCASE FTSK, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Massey, T.H, Mercogliano, C.P, Yates, J, Sherratt, D.J, Lowe, J.
Deposit date:2006-06-07
Release date:2006-08-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk
Mol.Cell, 23, 2006
8SHB
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BU of 8shb by Molmil
Crystal Structure of PRMT3 with Compound YD1-208
Descriptor: 5'-S-[3-(N'-phenylcarbamimidamido)propyl]-5'-thioadenosine, Protein arginine N-methyltransferase 3
Authors:Song, X, Dong, A, Deng, Y, Huang, R, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2023-04-13
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of PRMT3 with Compound YD1-208
To be published
8SHZ
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BU of 8shz by Molmil
Structure of human cGAS
Descriptor: Cyclic GMP-AMP synthase, ZINC ION
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-14
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SM7
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BU of 8sm7 by Molmil
Air-oxidized G. y4 TruffO expressed from M9 minimal medium supplemented with Fe
Descriptor: Amidohydrolase 2, FE (III) ION, SODIUM ION
Authors:Liu, C, Rittle, J.
Deposit date:2023-04-25
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bioinformatic Discovery of a Cambialistic Monooxygenase.
J.Am.Chem.Soc., 146, 2024
8D3D
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BU of 8d3d by Molmil
VWF tubule derived from dimeric D1-A1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, von Willebrand factor
Authors:Anderson, J.R, Li, J, Springer, T.A, Brown, A.
Deposit date:2022-06-01
Release date:2022-07-06
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange.
Blood, 140, 2022
5I65
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BU of 5i65 by Molmil
Porcine reproductive and respiratory syndrome virus nonstructural protein 7 alpha (nsp7 alpha)
Descriptor: Nonstructural proteins ORF1a
Authors:Chen, J, Xu, X.
Deposit date:2016-02-16
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of porcine reproductive and respiratory syndrome virus nonstructural protein 7 alpha (nsp7 alpha)
To Be Published
8SP6
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BU of 8sp6 by Molmil
COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
Descriptor: (1s,4s)-bicyclo[2.2.1]heptane, (5R0)FAL(MLZ)(5R5), Chromodomain Y-like protein 2, ...
Authors:Song, X, Beldar, S, Dong, A, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2023-05-02
Release date:2024-03-13
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:COMPLEX STRUCTURE OF CDYL2 WITH AN ANTAGONIST
To be published
7QCG
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BU of 7qcg by Molmil
Structure of SARS-CoV-2 Papain-like Protease bound to N-(2-pyrrolidyl)-3,4,5-trihydroxybenzoylhydrazone
Descriptor: 3,4,5-tris(oxidanyl)-N-[(E)-1H-pyrrol-2-ylmethylideneamino]benzamide, CHLORIDE ION, GLYCEROL, ...
Authors:Ewert, W, Gunther, S, Reinke, P, Falke, S, Lieske, J, Miglioli, F, Carcelli, M, Srinivasan, V, Betzel, C, Han, H, Lorenzen, K, Guenther, C, Niebling, S, Garcia-Alai, M, Hinrichs, W, Rogolino, D, Meents, A.
Deposit date:2021-11-23
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hydrazones and Thiosemicarbazones Targeting Protein-Protein-Interactions of SARS-CoV-2 Papain-like Protease.
Front Chem, 10, 2022
5XWV
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BU of 5xwv by Molmil
Substrate-bound Structure of a Ketoreductase from the Second Module of the amphotericin Polyketide Synthases
Descriptor: AmphB, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, S-[2-[3-[[(2R)-3,3-dimethyl-2,4-bis(oxidanyl)butanoyl]amino]propanoylamino]ethyl] (2R)-2-methyl-3-oxidanylidene-pentanethioate
Authors:Liu, C, Zheng, J.
Deposit date:2017-06-30
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate-bound structures of a ketoreductase from amphotericin modular polyketide synthase.
J. Struct. Biol., 203, 2018
7QCH
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BU of 7qch by Molmil
Structure of SARS-CoV-2 Papain-like Protease bound to N-(3,5-dimethoxy-4-hydroxybenzyliden)thiosemicarbazone
Descriptor: CHLORIDE ION, GLYCEROL, N-(3,5-dimetoxy-4-hydroxybenzyliden)thiosemicarbazone, ...
Authors:Ewert, W, Gunther, S, Reinke, P, Falke, S, Lieske, J, Miglioli, F, Carcelli, M, Srinivasan, V, Betzel, C, Han, H, Lorenzen, K, Guenther, C, Niebling, S, Garcia-Alai, M, Hinrichs, W, Rogolino, D, Meents, A.
Deposit date:2021-11-24
Release date:2022-03-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Hydrazones and Thiosemicarbazones Targeting Protein-Protein-Interactions of SARS-CoV-2 Papain-like Protease.
Front Chem, 10, 2022
4UN0
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BU of 4un0 by Molmil
Crystal structure of the human CDK12-cyclinK complex
Descriptor: CYCLIN-DEPENDENT KINASE 12, CYCLIN-K
Authors:Dixon Clarke, S.E, Elkins, J.M, Pike, A.C.W, Chaikuad, A, Goubin, S, Krojer, T, Sorrell, F.J, Nowak, R, Williams, E, Kopec, J, Mahajan, R.P, Burgess-Brown, N, Carpenter, E.P, Knapp, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2014-05-22
Release date:2014-06-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structures of the Cdk12/Cyck Complex with AMP-Pnp Reveal a Flexible C-Terminal Kinase Extension Important for ATP Binding.
Sci.Rep., 5, 2015
8SMA
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BU of 8sma by Molmil
SfbO with di-Manganese cofactor
Descriptor: Amidohydrolase family protein, MANGANESE (II) ION, SULFATE ION
Authors:Liu, C, Rittle, J.
Deposit date:2023-04-25
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Bioinformatic Discovery of a Cambialistic Monooxygenase.
J.Am.Chem.Soc., 146, 2024
3RAY
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BU of 3ray by Molmil
Crystal structure of Methyltransferase domain of human PR domain-containing protein 11
Descriptor: CHLORIDE ION, PR domain-containing protein 11, SODIUM ION, ...
Authors:Dong, A, Zeng, H, Loppnau, P, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2011-03-28
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of Methyltransferase domain of human PR domain-containing protein 11
To be Published
8H3H
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BU of 8h3h by Molmil
Human ATAD2 Walker B mutant, ATP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATPase family AAA domain-containing protein 2
Authors:Cho, C, Song, J.
Deposit date:2022-10-08
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Commun Biol, 6, 2023
8SJ1
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BU of 8sj1 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound 3'-dATP
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-17
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8D1V
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BU of 8d1v by Molmil
Cryo-EM structure of guide RNA and target RNA bound Cas7-11
Descriptor: CRISPR RNA (34-MER), CRISPR-associated RAMP family protein, SS target RNA (5'-R(P*AP*GP*CP*UP*UP*GP*GP*UP*UP*CP*AP*AP*AP*GP*AP*AP*CP*G)-3'), ...
Authors:Rai, J, Goswami, H, Li, H.
Deposit date:2022-05-27
Release date:2022-11-02
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Molecular mechanism of active Cas7-11 in processing CRISPR RNA and interfering target RNA.
Elife, 11, 2022
7QNC
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BU of 7qnc by Molmil
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with THIP (gaboxadol), histamine and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4,5,6,7-tetrahydro-[1,2]oxazolo[5,4-c]pyridin-3-one, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2022-04-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
8T28
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BU of 8t28 by Molmil
The crystal structure of SrtC2 sortase from Actinomyces oris
Descriptor: CHLORIDE ION, Class C sortase, PHOSPHATE ION
Authors:Osipiuk, J, Chang, C, Ton-That, H.L, Ton-That, H, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-06-05
Release date:2024-04-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase.
J.Biol.Chem., 300, 2024
5Y03
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BU of 5y03 by Molmil
Galectin-13/Placental Protein 13 variant R53H crystal structure
Descriptor: Galactoside-binding soluble lectin 13
Authors:Wang, Y, Su, J.
Deposit date:2017-07-14
Release date:2018-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138.
Sci Rep, 8, 2018
8SJ0
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BU of 8sj0 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound 2'-dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-17
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
4UNO
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BU of 4uno by Molmil
Crystal structure of the ETS domain of human ETV5 in complex with DNA
Descriptor: 5'-D(*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP)-3', 5'-D(*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP)-3', CALCIUM ION, ...
Authors:Newman, J.A, Aitkenhead, H, Cooper, C.D.O, Pinkas, D.M, Shrestha, L, Burgess-Brown, N, Kopec, J, Fitzpatrick, F, Tallant, C, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Gileadi, O.
Deposit date:2014-05-29
Release date:2014-06-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the Ets Domains of Transcription Factors Etv1, Etv4, Etv5 and Fev: Determinants of DNA Binding and Redox Regulation by Disulfide Bond Formation.
J.Biol.Chem., 290, 2015
8SM8
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BU of 8sm8 by Molmil
Air-oxidized A. ca TruffO expressed from M9 minimal medium supplemented with Fe
Descriptor: FE (III) ION, MAGNESIUM ION, Putative amidohydrolase, ...
Authors:Liu, C, Rittle, J.
Deposit date:2023-04-25
Release date:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bioinformatic Discovery of a Cambialistic Monooxygenase.
J.Am.Chem.Soc., 146, 2024

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PDB entries from 2024-10-16

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