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PDB: 17892 results

8AIH
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BU of 8aih by Molmil
Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase at 1.9 Angstroms Resolution
Descriptor: DIHYDROGENPHOSPHATE ION, Probable nicotinate-nucleotide adenylyltransferase, SULFATE ION
Authors:Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
Deposit date:2022-07-26
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
8Q6Q
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BU of 8q6q by Molmil
Structure of human immunity related GTPase Q in complex with GABARAPL2.
Descriptor: CITRIC ACID, Gamma-aminobutyric acid receptor-associated protein-like 2, Immunity-related GTPase family Q protein
Authors:Bailey, H.J, Misra, M, Pomirska, J, Dikic, I.
Deposit date:2023-08-14
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human immunity related GTPase Q in complex with GABARAPL2.
To Be Published
5A3A
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BU of 5a3a by Molmil
Crystal structure of the ADP-ribosylating sirtuin (SirTM) from Streptococcus pyogenes (Apo form)
Descriptor: 1,2-ETHANEDIOL, GLYCINE, SIR2 FAMILY PROTEIN, ...
Authors:Rack, J.G.M, Morra, R, Barkauskaite, E, Kraehenbuehl, R, Ariza, A, Qu, Y, Ortmayer, M, Leidecker, O, Cameron, D.R, Matic, I, Peleg, A.Y, Leys, D, Traven, A, Ahel, I.
Deposit date:2015-05-28
Release date:2015-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Identification of a Class of Protein Adp-Ribosylating Sirtuins in Microbial Pathogens.
Mol.Cell, 59, 2015
8Q65
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BU of 8q65 by Molmil
Mycobacterium smegmatis inosine monophosphate dehydrogenase (IMPDH) ATP-bound form
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
Authors:Bulvas, O, Kouba, T, Pichova, I.
Deposit date:2023-08-10
Release date:2024-08-14
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Deciphering the allosteric regulation of mycobacterial inosine-5'-monophosphate dehydrogenase.
Nat Commun, 15, 2024
6KYP
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BU of 6kyp by Molmil
X-ray structure of human PPARalpha ligand binding domain-GW9662-clofibric acid co-crystals obtained by delipidation and co-crystallization
Descriptor: 2-(4-chloranylphenoxy)-2-methyl-propanoic acid, 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor alpha
Authors:Kamata, S, Saito, K, Honda, A, Ishikawa, R, Oyama, T, Ishii, I.
Deposit date:2019-09-19
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates.
Iscience, 23, 2020
8AII
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BU of 8aii by Molmil
High Resolution Crystal Structure of Enterococcus faecium Nicotinate Nucleotide Adenylyltransferase Complexed with Adenine
Descriptor: ADENINE, MAGNESIUM ION, Probable nicotinate-nucleotide adenylyltransferase, ...
Authors:Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
Deposit date:2022-07-26
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Obtaining high yield recombinant Enterococcus faecium nicotinate nucleotide adenylyltransferase for X-ray crystallography and biophysical studies.
Int.J.Biol.Macromol., 250, 2023
5G4X
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BU of 5g4x by Molmil
The crystal structure of the SHANK3 N-terminus
Descriptor: 1,2-ETHANEDIOL, SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN 3
Authors:Zacharchenko, T, Barsukov, I.
Deposit date:2016-05-17
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.166 Å)
Cite:SHANK proteins limit integrin activation by directly interacting with Rap1 and R-Ras.
Nat. Cell Biol., 19, 2017
1ZVI
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BU of 1zvi by Molmil
Rat Neuronal Nitric Oxide Synthase Oxygenase Domain
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric-oxide synthase, brain, ...
Authors:Matter, H, Kumar, H.S, Fedorov, R, Frey, A, Kotsonis, P, Hartmann, E, Frohlich, L.G, Reif, A, Pfleiderer, W, Scheurer, P, Ghosh, D.K, Schlichting, I, Schmidt, H.H.
Deposit date:2005-06-02
Release date:2005-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of Isoform-Specific Inhibitors Targeting the Tetrahydrobiopterin Binding Site of Human Nitric Oxide Synthases.
J.Med.Chem., 48, 2005
1L2E
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BU of 1l2e by Molmil
Human Kallikrein 6 (hK6) Active Form with benzamidine inhibitor
Descriptor: BENZAMIDINE, Kallikrein 6, MAGNESIUM ION
Authors:Bernett, M.J, Blaber, S.I, Scarisbrick, I.A, Blaber, M.
Deposit date:2002-02-20
Release date:2002-05-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure and biochemical characterization of human kallikrein 6 reveals that a trypsin-like kallikrein is expressed in the central nervous system.
J.Biol.Chem., 277, 2002
8ALX
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BU of 8alx by Molmil
Structure of human PD-L1 in complex with inhibitor
Descriptor: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, AMINOMETHYLAMIDE, ACETATE ION, ...
Authors:Rodriguez, I, Grudnik, P, Holak, T, Magiera-Mularz, K.
Deposit date:2022-08-01
Release date:2023-08-16
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural and biological characterization of pAC65, a macrocyclic peptide that blocks PD-L1 with equivalent potency to the FDA-approved antibodies.
Mol Cancer, 22, 2023
7UR2
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BU of 7ur2 by Molmil
Crystal structure of the Sec14 domain of the RhoGEF Kalirin
Descriptor: Isoform 7 of Kalirin, SULFATE ION
Authors:Li, Y, Doukov, T.I, Hao, B.
Deposit date:2022-04-21
Release date:2023-01-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of the Sec14 domain of Kalirin reveals a distinct class of lipid-binding module in RhoGEFs.
Nat Commun, 14, 2023
4G79
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BU of 4g79 by Molmil
Structure a C. elegans SAS-6 variant
Descriptor: GLYCEROL, Spindle assembly abnormal protein 6, TETRAETHYLENE GLYCOL
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-07-20
Release date:2013-06-19
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
1J08
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BU of 1j08 by Molmil
Crystal structure of glutaredoxin-like protein from Pyrococcus horikoshii
Descriptor: glutaredoxin-like protein
Authors:Tanaka, Y, Tanabe, E, Tsumoto, K, Kumagai, I, Yao, M, Tanaka, I.
Deposit date:2002-11-11
Release date:2003-05-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein disulfide isomerase from hyperthermophile as an additives of refolding of an immunoglobulin-folded protein
To be Published
5KSR
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BU of 5ksr by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger).
Descriptor: 5'-nucleotidase SurE, CHLORIDE ION, IODIDE ION, ...
Authors:Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, M.A, Polikarpov, I, De Souza, A.P, De Aparicio, R, Iulek, J.
Deposit date:2016-07-09
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
8AVQ
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BU of 8avq by Molmil
AO75L in Complex with UDP-Xylose
Descriptor: 1,2-ETHANEDIOL, AO75L, BICINE, ...
Authors:Laugeri, M.E, Speciale, I, Gimeno, A, Lin, S, Poveda, A, Lowary, T, Van Etten, J.L, Barbero, J.J, De Castro, C, Tonetti, M, Rojas, A.L.
Deposit date:2022-08-26
Release date:2023-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:AO75L in Complex with UDP-Xylose
To Be Published
1RJF
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BU of 1rjf by Molmil
Structure of PPM1, a leucine carboxy methyltransferase involved in the regulation of protein phosphatase 2A activity
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, carboxy methyl transferase for protein phosphatase 2A catalytic subunit
Authors:Leulliot, N, Quevillon-Cheruel, S, Sorel, I, de La Sierra-Gallay, I.L, Collinet, B, Graille, M, Blondeau, K, Bettache, N, Poupon, A, Janin, J, van Tilbeurgh, H.
Deposit date:2003-11-19
Release date:2003-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of protein phosphatase methyltransferase 1 (PPM1), a leucine carboxyl methyltransferase involved in the regulation of protein phosphatase 2A activity
J.Biol.Chem., 279, 2004
4YHZ
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BU of 4yhz by Molmil
Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide
Descriptor: Fab Heavy Chain, Fab Light Chain, GLYCEROL, ...
Authors:Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
7XBS
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BU of 7xbs by Molmil
Crystal structure of the adenylation domain of CmnG
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CmnG
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022
7XBU
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BU of 7xbu by Molmil
Crystal structure of the adenylation domain of CmnG in complex with capreomycidine
Descriptor: (2S)-amino[(4R)-2-amino-1,4,5,6-tetrahydropyrimidin-4-yl]ethanoic acid, CmnG
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022
4DP6
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BU of 4dp6 by Molmil
The 1.67 Angstrom crystal structure of reduced (CuI) poplar plastocyanin B at pH 8.0
Descriptor: COPPER (I) ION, GLYCEROL, Plastocyanin B, ...
Authors:Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4YHY
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BU of 4yhy by Molmil
Crystal structure of 309M3-B in complex with trimethylated Lys
Descriptor: Fab Heavy Chain, Fab Light Chain, N-TRIMETHYLLYSINE
Authors:Hattori, T, Dementieva, I.S, Montano, S.P, Koide, S.
Deposit date:2015-02-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Proc.Natl.Acad.Sci.USA, 113, 2016
2PR1
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BU of 2pr1 by Molmil
Crystal structure of the Bacillus subtilis N-acetyltransferase YlbP protein in complex with Coenzyme-A
Descriptor: COBALT (II) ION, COENZYME A, SULFATE ION, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Vorontsov, I.I, Collart, F.R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-05-03
Release date:2007-05-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the Bacillus subtilis N-acetyltransferase YlbP protein in complex with Coenzyme-A.
To be Published
2PZ8
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BU of 2pz8 by Molmil
NAD+ Synthetase from Bacillus anthracis with AMP-CPP and Mg2+
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, GLYCEROL, MAGNESIUM ION, ...
Authors:McDonald, H.M, Pruett, P.S, Deivanayagam, C, Protasevich, I.I, Carson, W.M, DeLucas, L.J, Brouillette, W.J, Brouillette, C.G.
Deposit date:2007-05-17
Release date:2007-07-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural adaptation of an interacting non-native C-terminal helical extension revealed in the crystal structure of NAD(+) synthetase from Bacillus anthracis.
Acta Crystallogr.,Sect.D, 63, 2007
7UVA
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BU of 7uva by Molmil
Crystal structure of KDM2A histone demethylase catalytic domain in complex with an H3C36 peptide modified by UNC8015
Descriptor: FE (III) ION, Histone H3.2, Lysine-specific demethylase 2A, ...
Authors:Budziszewski, G.R, Azzam, D.N, Spangler, C.J, Skrajna, A, Foley, C.A, James, L.I, Frye, S.V, McGinty, R.K.
Deposit date:2022-04-29
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis of paralog-specific KDM2A/B nucleosome recognition.
Nat.Chem.Biol., 19, 2023
7XBV
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BU of 7xbv by Molmil
Crystal structure of the adenylation domain of CmnG in complex with AMPCPP
Descriptor: CmnG, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, PHOSPHATE ION
Authors:Chen, I.H, Wang, Y.L, Chang, C.Y.
Deposit date:2022-03-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Characterization and Structural Determination of CmnG-A, the Adenylation Domain That Activates the Nonproteinogenic Amino Acid Capreomycidine in Capreomycin Biosynthesis.
Chembiochem, 23, 2022

224931

數據於2024-09-11公開中

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