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PDB: 40 results

1C9H
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BU of 1c9h by Molmil
CRYSTAL STRUCTURE OF FKBP12.6 IN COMPLEX WITH RAPAMYCIN
Descriptor: FKBP12.6, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Deivanayagam, C.C.S, Carson, M, Thotakura, A, Narayana, S.V.L, Chodavarapu, C.S.
Deposit date:1999-08-02
Release date:2000-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of FKBP12.6 in complex with rapamycin.
Acta Crystallogr.,Sect.D, 56, 2000
1D2P
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BU of 1d2p by Molmil
CRYSTAL STRUCTURE OF TWO B REPEAT UNITS (B1B2) OF THE COLLAGEN BINDING PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS
Descriptor: COLLAGEN ADHESIN
Authors:Deivanayagam, C.C.S, Rich, R.L, Hook, M, Narayana, S.V.L.
Deposit date:1999-09-25
Release date:2000-09-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel fold and assembly of the repetitive B region of the Staphylococcus aureus collagen-binding surface protein.
Structure Fold.Des., 8, 2000
1D2O
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BU of 1d2o by Molmil
CRYSTAL STRUCTURE OF A SINGLE B REPEAT UNIT (B1) OF COLLAGEN BINDING SURFACE PROTEIN (CNA) OF STAPHYLOCOCCUS AUREUS.
Descriptor: COLLAGEN ADHESIN
Authors:Deivanayagam, C.C.S, Rich, R.L, Hook, M, Narayana, S.V.L.
Deposit date:1999-09-25
Release date:2000-09-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel fold and assembly of the repetitive B region of the Staphylococcus aureus collagen-binding surface protein.
Structure Fold.Des., 8, 2000
1QC5
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BU of 1qc5 by Molmil
I Domain from Integrin Alpha1-Beta1
Descriptor: MAGNESIUM ION, PROTEIN (ALPHA1 BETA1 INTEGRIN)
Authors:Deivanayagam, C.C, Narayana, S.V.
Deposit date:1999-05-17
Release date:2000-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trench-shaped binding sites promote multiple classes of interactions between collagen and the adherence receptors, alpha(1)beta(1) integrin and Staphylococcus aureus cna MSCRAMM.
J.Biol.Chem., 274, 1999
1N67
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BU of 1n67 by Molmil
Clumping Factor A from Staphylococcus aureus
Descriptor: Clumping Factor, MAGNESIUM ION
Authors:Deivanayagam, C.C.S, Wann, E.R, Chen, W, Carson, M, Rajashankar, K.R, Hook, M, Narayana, S.V.L.
Deposit date:2002-11-08
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel variant of the immunoglobulin fold in surface adhesins of Staphylococcus aureus: crystal structure of the fibrinogen-binding MSCRAMM, clumping factor A
Embo J., 21, 2002
6WV2
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BU of 6wv2 by Molmil
Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
Descriptor: Hyaluronan Lyase, NICKEL (II) ION
Authors:Deivanayagam, C, Schormann, N.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
To Be Published
6X3M
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Crystal structure of full-length Streptococcal bacteriophage hyaluronidase in complex with unsaturated hyaluronan octa-saccharides
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hyaluronoglucosaminidase
Authors:Deivanayagam, C, Schormann, N.
Deposit date:2020-05-21
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.581 Å)
Cite:Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
To Be Published
6WWX
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Crystal structure of truncated bacteriophage hyaluronan lyase HylP in complex with unsaturated hyaluronan tetra-saccharides
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hyaluronoglucosaminidase, NICKEL (II) ION
Authors:Deivanayagam, C, Schormann, N.
Deposit date:2020-05-09
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
To Be Published
6WXA
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BU of 6wxa by Molmil
Crystal structure of truncated Streptococcal bacteriophage hyaluronidase complexed with unsaturated hyaluronan hexa-saccharides
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Deivanayagam, C, Schormann, N.
Deposit date:2020-05-10
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Streptococcal Bacteriophage Hyaluronidase: Presence of a Prokaryotic Collagen and Elucidation of Catalytic Mechanism
To Be Published
5UQZ
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BU of 5uqz by Molmil
Structural Analysis of the Glucan Binding Protein C of Streptococcus mutans Provides Evidence that it Mediates both Sucrose-Independent and -Dependent Adherence
Descriptor: CALCIUM ION, Glucan-binding protein C, GbpC
Authors:Larson, M.R, Purushotham, S, Mieher, J, Wu, R, Rajashankar, K.R, Wu, H, Deivanayagam, C.
Deposit date:2017-02-08
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.149 Å)
Cite:Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence.
Infect. Immun., 86, 2018
8UF5
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BU of 8uf5 by Molmil
Catalytic domain of GtfB in complex with inhibitor G43
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Schormann, N, Deivanayagam, C, Velu, S.
Deposit date:2023-10-03
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Discovery of Small Molecule Inhibitors of Cariogenic Virulence.
Sci Rep, 7, 2017
3IOX
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BU of 3iox by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFITE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-14
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IPK
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BU of 3ipk by Molmil
Crystal Structure of A3VP1 of AgI/II of Streptococcus mutans
Descriptor: AgI/II, CALCIUM ION, SULFATE ION, ...
Authors:Larson, M.R, Rajashankar, K.R, Patel, M, Robinette, R, Crowley, P, Michalek, S.M, Brady, L.J, Deivanayagam, C.C.
Deposit date:2009-08-17
Release date:2010-03-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Elongated fibrillar structure of a streptococcal adhesin assembled by the high-affinity association of alpha- and PPII-helices.
Proc.Natl.Acad.Sci.USA, 107, 2010
6CAM
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BU of 6cam by Molmil
Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence
Descriptor: CALCIUM ION, Glucan-binding protein C, beta-D-glucopyranose
Authors:Schormann, N, Mieher, J.L, Deivanayagam, C.
Deposit date:2018-01-31
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence.
Infect. Immun., 86, 2018
3QE5
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BU of 3qe5 by Molmil
Complete structure of Streptococcus mutans Antigen I/II carboxy-terminus
Descriptor: CALCIUM ION, MAGNESIUM ION, Major cell-surface adhesin PAc, ...
Authors:Larson, M.R, Rajashankar, K.R, Crowley, P.J, Kelly, C, Mitchell, T.J, Brady, L.J, Deivanayagam, C.
Deposit date:2011-01-19
Release date:2011-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the C-terminal Region of Streptococcus mutans Antigen I/II and Characterization of Salivary Agglutinin Adherence Domains.
J.Biol.Chem., 286, 2011
7LGR
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BU of 7lgr by Molmil
Streptococcus mutans Collagen binding Protein CNM - N2 Domain
Descriptor: Collagen-binding adhesin
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2021-01-20
Release date:2022-01-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Streptococcus mutans Collagen binding Protein CNM - Structural and Functional Analysis of the C-terminal N2 Domain
To Be Published
7L0O
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BU of 7l0o by Molmil
Streptococcus gordonii C123 Domain(s)-Structural and Functional Analysis
Descriptor: Agglutinin receptor, CALCIUM ION
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2020-12-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional analysis of the C-terminal region of Streptococcus gordonii SspB.
Acta Crystallogr D Struct Biol, 77, 2021
6Q2K
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The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Descriptor: Agglutinin receptor, CALCIUM ION
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2019-08-08
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
To Be Published
6Q2L
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BU of 6q2l by Molmil
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Descriptor: Agglutinin receptor, GLYCEROL, MAGNESIUM ION
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2019-08-08
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
To Be Published
6E3F
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BU of 6e3f by Molmil
The structure of the C-terminal domains (C123) of Streptococcus intermedius antigen I/II (Pas)
Descriptor: CALCIUM ION, Probable cell-surface antigen I/II
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2018-07-13
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-Function Characterization of Streptococcus intermedius Surface Antigen Pas.
J.Bacteriol., 203, 2021
6E36
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BU of 6e36 by Molmil
The structure of the variable domain of Streptococcus intermedius antigen I/II (Pas)
Descriptor: MAGNESIUM ION, Probable cell-surface antigen I/II
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2018-07-13
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Function Characterization of Streptococcus intermedius Surface Antigen Pas.
J.Bacteriol., 203, 2021
6MEB
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BU of 6meb by Molmil
Crystal structure of Tylonycteris bat coronavirus HKU4 macrodomain in complex with nicotinamide adenine dinucleotide (NAD+)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Replicase polyprotein 1ab
Authors:Hammond, R.G, Schormann, N, McPherson, R.L, Leung, A.K.L, Deivanayagam, C.C.S, Johnson, M.A.
Deposit date:2018-09-06
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ADP-Ribose and Analogues bound to the DeMARylating Macrodomain from the Bat Coronavirus HKU4
Proc.Natl.Acad.Sci.USA, 2021
6MEA
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BU of 6mea by Molmil
Crystal structure of a Tylonycteris bat coronavirus HKU4 macrodomain in complex with adenosine diphosphate ribose (ADP-ribose)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Replicase polyprotein 1ab
Authors:Hammond, R.G, Schormann, N, McPherson, R.L, Leung, A.K.L, Deivanayagam, C.C.S, Johnson, M.A.
Deposit date:2018-09-06
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:ADP-Ribose and Analogues bound to the DeMARylating Macrodomain from the Bat Coronavirus HKU4
Proc.Natl.Acad.Sci.USA, 2021
6MEN
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BU of 6men by Molmil
Crystal structure of a Tylonycteris bat coronavirus HKU4 macrodomain in complex with adenosine diphosphate glucose (ADP-glucose)
Descriptor: ADENOSINE-5'-DIPHOSPHATE-GLUCOSE, Replicase polyprotein 1ab
Authors:Hammond, R.G, Schormann, N, McPherson, R.L, Leung, A.K.L, Deivanayagam, C.C.S, Johnson, M.A.
Deposit date:2018-09-06
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:ADP-Ribose and Analogues bound to the DeMARylating Macrodomain from the Bat Coronavirus HKU4
Proc.Natl.Acad.Sci.USA, 2021
8FG8
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BU of 8fg8 by Molmil
Catalytic domain of GtfB in complex with inhibitor 2-[(2,4,5-Trihydroxyphenyl)methylidene]-1-benzofuran-3-one
Descriptor: (2Z)-2-[(2,4,5-trihydroxyphenyl)methylidene]-1-benzofuran-3(2H)-one, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Schormann, N, Deivanayagam, C, Velu, S.
Deposit date:2022-12-12
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Hydrogel-Encapsulated Biofilm Inhibitors Abrogate the Cariogenic Activity of Streptococcus mutans .
J.Med.Chem., 66, 2023

 

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