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PDB: 17822 results

4JEH
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Crystal Structure of Munc18a and Syntaxin1 lacking N-peptide complex
Descriptor: Syntaxin-1A, Syntaxin-binding protein 1
Authors:Colbert, K.N, Hattendorf, D.A, Weiss, T.M, Burkhardt, P, Fasshauer, D, Weis, W.I.
Deposit date:2013-02-27
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Syntaxin1a variants lacking an N-peptide or bearing the LE mutation bind to Munc18a in a closed conformation.
Proc.Natl.Acad.Sci.USA, 110, 2013
7MGR
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SARS-CoV-2 main protease in complex with nsp8/9 substrate peptide
Descriptor: 3C-like proteinase, ALA-VAL-LYS-LEU-GLN-ASN-ASN-GLU
Authors:MacDonald, E.A, Windsor, I.W, Hinshaw, S.M.
Deposit date:2021-04-13
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Recognition of Divergent Viral Substrates by the SARS-CoV-2 Main Protease.
Acs Infect Dis., 7, 2021
2AE5
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Glutaryl 7-Aminocephalosporanic Acid Acylase: mutational study of activation mechanism
Descriptor: GLYCEROL, Glutaryl 7-Aminocephalosporanic Acid Acylase, SULFATE ION
Authors:Kim, J.K, Yang, I.S, Shin, H.J, Cho, K.J, Ryu, E.K, Kim, S.H, Park, S.S, Kim, K.H.
Deposit date:2005-07-21
Release date:2006-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Insight into autoproteolytic activation from the structure of cephalosporin acylase: a protein with two proteolytic chemistries.
Proc.Natl.Acad.Sci.USA, 103, 2006
1NAT
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CRYSTAL STRUCTURE OF SPOOF FROM BACILLUS SUBTILIS
Descriptor: SPORULATION RESPONSE REGULATORY PROTEIN
Authors:Madhusudan, Zapf, J, Hoch, J.A, Whiteley, J.M, Xuong, N.H, Varughese, K.I.
Deposit date:1997-09-09
Release date:1998-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A response regulatory protein with the site of phosphorylation blocked by an arginine interaction: crystal structure of Spo0F from Bacillus subtilis.
Biochemistry, 36, 1997
1JH8
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Structural Investigation of the Biosynthesis of Alternative Lower Ligands for Cobamides by Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase (CobT) from Salmonella enterica
Descriptor: ADENINE, Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase, PHOSPHATE ION
Authors:Cheong, C.-G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-27
Release date:2001-09-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001
1JHP
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Three-dimensional Structure of CobT in Complex with 5-methoxybenzimidazole
Descriptor: 5-METHOXYBENZIMIDAZOLE, Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase, PHOSPHATE ION
Authors:Cheong, C.G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-28
Release date:2001-10-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001
1JHX
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Three-dimensional Structure of CobT in Complex with Phenol
Descriptor: Nicotinate Mononucleotide:5,6-Dimethylbenzimidazole Phosphoribosyltransferase, PHENOL, PHOSPHATE ION
Authors:Cheong, C.G, Escalante-Semerena, J, Rayment, I.
Deposit date:2001-06-28
Release date:2001-10-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural investigation of the biosynthesis of alternative lower ligands for cobamides by nicotinate mononucleotide: 5,6-dimethylbenzimidazole phosphoribosyltransferase from Salmonella enterica.
J.Biol.Chem., 276, 2001
7MIQ
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Crystal structure of a Glutathione S-transferase class Gtt2 of Vibrio parahaemolyticus (VpGSTT2)
Descriptor: DI(HYDROXYETHYL)ETHER, Glutathione S-transferase, SULFATE ION
Authors:Valenzuela-Chavira, I, Serrano-Posada, H, Lopez-Zavala, A.A, Garcia-Orozco, K.D, Sotelo-Mundo, R.R.
Deposit date:2021-04-17
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:A Novel Glutathione S -Transferase Gtt2 Class (VpGSTT2) Is Found in the Genome of the AHPND/EMS Vibrio parahaemolyticus Shrimp Pathogen.
Toxins, 13, 2021
1JY9
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MINIMIZED AVERAGE STRUCTURE OF DP-TT2
Descriptor: DP-TT2
Authors:Stanger, H.E, Syud, F.A, Espinosa, J.F, Giriat, I, Muir, T, Gellman, S.H.
Deposit date:2001-09-11
Release date:2001-09-19
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Length-dependent stability and strand length limits in antiparallel beta -sheet secondary structure.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JYD
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Crystal Structure of Recombinant Human Serum Retinol-Binding Protein at 1.7 A Resolution
Descriptor: GLYCEROL, PLASMA RETINOL-BINDING PROTEIN
Authors:Greene, L.H, Chrysina, E.D, Irons, L.I, Papageorgiou, A.C, Acharya, K.R, Brew, K.
Deposit date:2001-09-12
Release date:2003-07-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of conserved residues in structure and stability: Tryptophans of human serum retinol-binding protein, a model for the lipocalin superfamily
Protein Sci., 10, 2001
1NSO
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Folded monomer of protease from Mason-Pfizer monkey virus
Descriptor: Protease 13 kDa
Authors:Veverka, V, Bauerova, H, Zabransky, A, Lang, J, Ruml, T, Pichova, I, Hrabal, R.
Deposit date:2003-01-28
Release date:2003-02-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of a monomeric form of a retroviral protease
J.MOL.BIOL., 333, 2003
3LB9
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Crystal structure of the B. circulans cpA123 circular permutant
Descriptor: Endo-1,4-beta-xylanase
Authors:D'Angelo, I, Reitinger, S, Ludwiczek, M, Strynadka, N, Withers, S.G, Mcintosh, L.P.
Deposit date:2010-01-08
Release date:2010-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Circular permutation of Bacillus circulans xylanase: a kinetic and structural study.
Biochemistry, 49, 2010
4IZK
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Crystal structure of yellowtail ascites virus VP4 protease active site mutant (K674A) reveals both an acyl-enzyme complex and an empty active site
Descriptor: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Yellowtail Ascites Virus (YAV) VP4 protease
Authors:Paetzel, M, Chung, I.Y.W.
Deposit date:2013-01-30
Release date:2013-02-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
2AEF
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Crystal Structures of the MthK RCK Domain in Ca2+ bound form
Descriptor: CALCIUM ION, Calcium-gated potassium channel mthK
Authors:Dong, J, Shi, N, Berke, I, Chen, L, Jiang, Y.
Deposit date:2005-07-22
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the MthK RCK Domain and the Effect of Ca2+ on Gating Ring Stability
J.Biol.Chem., 280, 2005
1QRX
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CRYSTAL STRUCTURE OF WILD-TYPE ALPHA-LYTIC PROTEASE AT 1.6 A, PH 5.14
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-16
Release date:1999-06-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
274D
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BU of 274d by Molmil
CRYSTAL STRUCTURE OF A COVALENT DNA-DRUG ADDUCT: ANTHRAMYCIN BOUND TO C-C-A-A-C-G-T-T-G-G, AND A MOLECULAR EXPLANATION OF SPECIFICITY
Descriptor: ANTHRAMYCIN, DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*(DRUG)GP*G)-3')
Authors:Kopka, M.L, Goodsell, D.S, Baikalov, I, Grzeskowiak, K, Cascio, D, Dickerson, R.E.
Deposit date:1994-04-28
Release date:1994-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a covalent DNA-drug adduct: anthramycin bound to C-C-A-A-C-G-T-T-G-G and a molecular explanation of specificity.
Biochemistry, 33, 1994
3LQ0
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BU of 3lq0 by Molmil
Zymogen structure of crayfish astacin metallopeptidase
Descriptor: GLYCEROL, ProAstacin, SULFATE ION, ...
Authors:Guevara, T, Yiallouros, I, Kappelhoff, R, Bissdorf, S, Stocker, W, Gomis-Ruth, F.X.
Deposit date:2010-02-08
Release date:2010-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Proenzyme structure and activation of astacin metallopeptidase
J.Biol.Chem., 285, 2010
210L
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BU of 210l by Molmil
PROTEIN STRUCTURE PLASTICITY EXEMPLIFIED BY INSERTION AND DELETION MUTANTS IN T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, T4 LYSOZYME
Authors:Vetter, I.R, Baase, W.A, Heinz, D.W, Xiong, J.-P, Snow, S, Matthews, B.W.
Deposit date:1996-09-23
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Protein structural plasticity exemplified by insertion and deletion mutants in T4 lysozyme.
Protein Sci., 5, 1996
1Q6B
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Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Ensemble of 25 Structures
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Golden, S.S, Holzenburg, A, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
1LNS
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Crystal Structure Analysis of the X-Prolyl Dipeptidyl Aminopeptidase From Lactococcus lactis
Descriptor: X-PROLYL DIPEPTIDYL AMINOPEPTIDASE
Authors:Rigolet, P, Mechin, I, Delage, M.M, Chich, J.F.
Deposit date:2002-05-03
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structural Basis for Catalysis and Specificity of the X-prolyl dipepdidyl aminopeptidase from Lactococcus lactis
Structure, 10, 2002
1LPW
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Solution structure of the yeast spliceosomal U2 snRNA-intron branch site helix featuring a conserved pseudouridine
Descriptor: 5'-R(*GP*GP*UP*GP*(PSU)P*AP*GP*UP*A)-3', 5'-R(*UP*AP*CP*UP*AP*AP*CP*AP*CP*C)-3'
Authors:Newby, M.I, Greenbaum, N.L.
Deposit date:2002-05-08
Release date:2002-11-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Sculpting of the Spliceosomal Branch Site Recognition Motif by a Conserved Pseudouridine
Nat.Struct.Biol., 12, 2002
1QIX
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Porcine pancreatic elastase complexed with human beta-casomorphin-7
Descriptor: BETA-CASOMORPHIN-7, CALCIUM ION, ELASTASE, ...
Authors:Wilmouth, R.C, Clifton, I.J, Hajdu, J, Schofield, C.J.
Deposit date:1999-06-18
Release date:1999-12-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Specific Acyl-Enzyme Complex Formed between Beta-Casomorphin-7 and Porcine Pancreatic Elastase
Nat.Struct.Biol., 4, 1997
1LM5
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Structures of two intermediate filament-binding fragments of desmoplakin reveal a unique repeat motif structure
Descriptor: subdomain of Desmoplakin Carboxy-Terminal domain (DPCT)
Authors:Choi, H.J, Park-Snyder, S, Pascoe, L.T, Green, K.J, Weis, W.I.
Deposit date:2002-04-30
Release date:2002-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of two intermediate filament-binding fragments of desmoplakin reveal a unique repeat motif structure.
Nat.Struct.Biol., 9, 2002
1Q6Q
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound xylitol 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLITOL 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1LMV
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Solution structure of the unmodified U2 snRNA-intron branch site helix from S. cerevisiae
Descriptor: 5'-R(*GP*GP*UP*GP*UP*AP*GP*UP*A)-3', 5'-R(*UP*AP*CP*UP*AP*AP*CP*AP*CP*C)-3'
Authors:Newby, M.I, Greenbaum, N.L.
Deposit date:2002-05-02
Release date:2002-11-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Sculpting of the Spliceosomal Branch Site Recognition Motif by a Conserved Pseudouridine
Nat.Struct.Biol., 9, 2002

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