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PDB: 17892 results

4FQR
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Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Broadly neutralizing antibody C05, ...
Authors:Ekiert, D.C, Wilson, I.A.
Deposit date:2012-06-25
Release date:2012-09-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Cross-neutralization of influenza A viruses mediated by a single antibody loop.
Nature, 489, 2012
1JYM
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Crystals of Peptide Deformylase from Plasmodium falciparum with Ten Subunits per Asymmetric Unit Reveal Critical Characteristics of the Active Site for Drug Design
Descriptor: COBALT (II) ION, Peptide Deformylase
Authors:Kumar, A, Nguyen, K.T, Srivathsan, S, Ornstein, B, Turley, S, Hirsh, I, Pei, D, Hol, W.G.J.
Deposit date:2001-09-12
Release date:2002-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystals of peptide deformylase from Plasmodium falciparum reveal critical characteristics of the active site for drug design.
Structure, 10, 2002
3IU1
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Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA
Descriptor: Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
Authors:Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2009-08-29
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA
To be Published
2H65
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Crystal strusture of caspase-3 with inhibitor Ac-VDVAD-Cho
Descriptor: Ac-VDVAD-Cho, caspase-3, p12 subunit, ...
Authors:Fang, B, Boross, P.I, Tozser, J, Weber, I.T.
Deposit date:2006-05-30
Release date:2006-09-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic analysis of caspase-3 reveals role for s5 binding site in substrate recognition
J.Mol.Biol., 360, 2006
7EV4
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Crystal structure of the Lon-like protease MtaLonC with S582A mutation in complex with F-b20-Q
Descriptor: Endopeptidase La, F-b20-Q peptide {ortho-aminobenzoic acid (Abz)- QLRSLNGEWRFAWFPAPEAV[Tyr(3-NO2)]A}, PHOSPHATE ION
Authors:Hsieh, K.Y, Kuo, C.I, Su, S.C, Huang, K.F, Chang, C.I.
Deposit date:2021-05-20
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Processive cleavage of substrate at individual proteolytic active sites of the Lon protease complex.
Sci Adv, 7, 2021
7EUY
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BU of 7euy by Molmil
Crystal structure of the Lon-like protease MtaLonC with D582A mutation in complex with substrate polypeptide
Descriptor: ALA-PRO-GLU-ALA-VAL, Endopeptidase La, PHOSPHATE ION
Authors:Hsieh, K.Y, Kuo, C.I, Su, S.C, Huang, K.F, Chang, C.I.
Deposit date:2021-05-19
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Processive cleavage of substrate at individual proteolytic active sites of the Lon protease complex.
Sci Adv, 7, 2021
4LHM
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Thymidine phosphorylase from E.coli with 3'-azido-3'-deoxythymidine
Descriptor: 3'-azido-3'-deoxythymidine, GLYCEROL, SULFATE ION, ...
Authors:Timofeev, V.I, Abramchik, Y.A, Esipov, R.S, Kuranova, I.P.
Deposit date:2013-07-01
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:3'-Azidothymidine in the active site of Escherichia coli thymidine phosphorylase: the peculiarity of the binding on the basis of X-ray study.
Acta Crystallogr.,Sect.D, 70, 2014
1F4I
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SOLUTION STRUCTURE OF THE HHR23A UBA(2) MUTANT P333E, DEFICIENT IN BINDING THE HIV-1 ACCESSORY PROTEIN VPR
Descriptor: UV EXCISION REPAIR PROTEIN PROTEIN RAD23 HOMOLOG A
Authors:Withers-Ward, E.S, Mueller, T.D, Chen, I.S, Feigon, J.
Deposit date:2000-06-07
Release date:2000-12-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Biochemical and structural analysis of the interaction between the UBA(2) domain of the DNA repair protein HHR23A and HIV-1 Vpr.
Biochemistry, 39, 2000
1U89
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Solution structure of VBS2 fragment of talin
Descriptor: Talin 1
Authors:Fillingham, I, Gingras, A.R, Papagrigoriou, E, Patel, B, Emsley, J, Roberts, G.C.K, Critchley, D.R, Barsukov, I.L.
Deposit date:2004-08-05
Release date:2005-01-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A vinculin binding domain from the talin rod unfolds to form a complex with the vinculin head.
Structure, 13, 2005
1BCC
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CYTOCHROME BC1 COMPLEX FROM CHICKEN
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Zhang, Z, Huang, L, Shulmeister, V.M, Chi, Y.-I, Kim, K.K, Hung, L.-W, Crofts, A.R, Berry, E.A, Kim, S.-H.
Deposit date:1998-03-23
Release date:1998-08-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Electron transfer by domain movement in cytochrome bc1.
Nature, 392, 1998
4GTL
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T. Maritima FDTS (R174K mutant) with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX
Authors:Mathews, I.I, Lesley, S.A, Kohen, A.
Deposit date:2012-08-28
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Folate binding site of flavin-dependent thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4CAT
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BU of 4cat by Molmil
THREE-DIMENSIONAL STRUCTURE OF CATALASE FROM PENICILLIUM VITALE AT 2.0 ANGSTROMS RESOLUTION
Descriptor: CATALASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vainshtein, B.K, Melik-Adamyan, W.R, Barynin, V.V, Vagin, A.A, Grebenko, A.I.
Deposit date:1983-02-24
Release date:1983-09-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three-dimensional structure of catalase from Penicillium vitale at 2.0 A resolution.
J.Mol.Biol., 188, 1986
2STA
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BU of 2sta by Molmil
ANIONIC SALMON TRYPSIN IN COMPLEX WITH SQUASH SEED INHIBITOR (CUCURBITA MAXIMA TRYPSIN INHIBITOR I)
Descriptor: CALCIUM ION, PROTEIN (TRYPSIN INHIBITOR), PROTEIN (TRYPSIN)
Authors:Helland, R, Berglund, G.I, Otlewski, J, Apostoluk, W, Andersen, O.A, Willassen, N.P, Smalas, A.O.
Deposit date:1998-12-10
Release date:2000-01-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structures of three new trypsin-squash-inhibitor complexes: a detailed comparison with other trypsins and their complexes.
Acta Crystallogr.,Sect.D, 55, 1999
3GF5
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BU of 3gf5 by Molmil
Crystal structure of the P21 R1-R7 N-terminal domain of murine MVP
Descriptor: GLYCEROL, Major vault protein
Authors:Querol-Audi, J, Casanas, A, Luque, D, Caston, J.R, Fita, I, Verdaguer, N.
Deposit date:2009-02-26
Release date:2009-11-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The mechanism of vault opening from the high resolution structure of the N-terminal repeats of MVP
Embo J., 28, 2009
4GXV
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BU of 4gxv by Molmil
Crystal structure of anti-influenza virus antibody 1F1
Descriptor: Antibody 1F1, heavy chain, light chain
Authors:Ekiert, D.C, Wilson, I.A.
Deposit date:2012-09-04
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Influenza Human Monoclonal Antibody 1F1 Interacts with Three Major Antigenic Sites and Residues Mediating Human Receptor Specificity in H1N1 Viruses.
Plos Pathog., 8, 2012
3IU2
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Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90096
Descriptor: (2R)-2-{4-hydroxy-5-methoxy-2-[3-(4-methylpiperazin-1-yl)propyl]phenyl}-3-pyridin-3-yl-1,3-thiazolidin-4-one, Glycylpeptide N-tetradecanoyltransferase 1, TETRADECANOYL-COA
Authors:Qiu, W, Hutchinson, A, Wernimont, A, Lin, Y.-H, Kania, A, Ravichandran, M, Kozieradzki, I, Cossar, D, Schapira, M, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Wyatt, P.G, Ferguson, M.A.J, Frearson, J.A, Brand, S.Y, Robinson, D.A, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2009-08-29
Release date:2009-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA and inhibitor DDD90096
To be Published
1XY2
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CRYSTAL STRUCTURE ANALYSIS OF DEAMINO-OXYTOCIN. CONFORMATIONAL FLEXIBILITY AND RECEPTOR BINDING
Descriptor: OXYTOCIN
Authors:Cooper, S, Blundell, T.L, Pitts, J.E, Wood, S.P, Tickle, I.J.
Deposit date:1987-06-05
Release date:1988-04-16
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure analysis of deamino-oxytocin: conformational flexibility and receptor binding.
Science, 232, 1986
4CQK
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Crystal structure of ligand-bound NaD1
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLOWER-SPECIFIC DEFENSIN, SULFATE ION, ...
Authors:Lay, F.T, Mills, G.M, Poon, I.K.H, Baxter, A.A, Hulett, M.D, Kvansakul, M.
Deposit date:2014-02-17
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoinositide-Mediated Oligomerization of a Defensin Induces Cell Lysis.
Elife, 3, 2014
2V76
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Crystal structure of the human dok1 PTB domain
Descriptor: 1,2-ETHANEDIOL, DOCKING PROTEIN 1, GLYCEROL, ...
Authors:Oxley, C.L, Anthis, N.J, Lowe, E.D, Campbell, I.D, Wegener, K.L.
Deposit date:2007-07-26
Release date:2008-01-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Integrin Phosphorylation Switch: The Effect of {Beta}3 Integrin Tail Phosphorylation on Dok1 and Talin Binding.
J.Biol.Chem., 283, 2008
4CQN
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Crystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogue
Descriptor: ESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTOR, LEUCINE--TRNA LIGASE, MAGNESIUM ION, ...
Authors:Palencia, A, Cusack, S, Cvetesic, N, Haslaz, I, Gruic-Sovulj, I.
Deposit date:2014-02-20
Release date:2014-07-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Physiological Target for Leurs Translational Quality Control is Norvaline
Embo J., 33, 2014
1AXX
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BU of 1axx by Molmil
THE SOLUTION STRUCTURE OF OXIDIZED RAT MICROSOMAL CYTOCHROME B5, NMR, 19 STRUCTURES
Descriptor: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Arnesano, F, Banci, L, Bertini, I, Felli, I.C.
Deposit date:1997-10-22
Release date:1998-03-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of oxidized rat microsomal cytochrome b5.
Biochemistry, 37, 1998
1G3G
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NMR STRUCTURE OF THE FHA1 DOMAIN OF YEAST RAD53
Descriptor: PROTEIN KINASE SPK1
Authors:Yuan, C, Liao, H, Su, M, Yongkiettrakul, S, Byeon, I.-J.L, Tsai, M.-D.
Deposit date:2000-10-24
Release date:2001-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the FHA1 domain of yeast Rad53 and identification of binding sites for both FHA1 and its target protein Rad9
J.Mol.Biol., 304, 2000
1FQ4
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CRYSTAL STRUCTURE OF A COMPLEX BETWEEN HYDROXYETHYLENE INHIBITOR CP-108,420 AND YEAST ASPARTIC PROTEINASE A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[(2R)-1-{[(2S,3R,5R)-1-cyclohexyl-3-hydroxy-5-{[2-(morpholin-4-yl)ethyl]carbamoyl}oct-7-yn-2-yl]amino}-3-(methylsulfa nyl)-1-oxopropan-2-yl]-1H-benzimidazole-2-carboxamide, SACCHAROPEPSIN, ...
Authors:Cronin, N.B, Badasso, M.O, Tickle, I.J, Dreyer, T, Hoover, D.J, Rosati, R.L, Humblet, C.C, Lunney, E.A, Cooper, J.B.
Deposit date:2000-09-03
Release date:2000-09-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity.
J.Mol.Biol., 303, 2000
1UTN
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Trypsin specificity as elucidated by LIE calculations, X-ray structures and association constant measurements
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZYLAMINE, CALCIUM ION, ...
Authors:Leiros, H.-K.S, Brandsdal, B.O, Andersen, O.A, Os, V, Leiros, I, Helland, R, Otlewski, J, Willassen, N.P, Smalas, A.O.
Deposit date:2003-12-09
Release date:2004-01-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Trypsin Specificity as Elucidated by Lie Calculations, X-Ray Structures, and Association Constant Measurements
Protein Sci., 13, 2004
1FQ5
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X-ray structure of a cyclic statine inhibitor PD-129,541 bound to yeast proteinase A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[(5S,9S,10S,13S)-9-hydroxy-5,10-bis(2-methylpropyl)-4,7,12,16-tetraoxo-3,6,11,17-tetraazabicyclo[17.3.1]tricosa-1(23),19,21-trien-13-yl]-3-(naphthalen-1-yl)-2-(naphthalen-1-ylmethyl)propanamide, SACCHAROPEPSIN, ...
Authors:Cronin, N.B, Badasso, M.O, Tickle, I.J, Dreyer, T, Hoover, D.J, Rosati, R.L, Humblet, C.C, Lunney, E.A, Cooper, J.B.
Deposit date:2000-09-03
Release date:2000-09-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity.
J.Mol.Biol., 303, 2000

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