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PDB: 553 results

4Q35
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BU of 4q35 by Molmil
Structure of a membrane protein
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, LPS-assembly lipoprotein LptE, ...
Authors:Huang, Y, Qiao, S, Luo, Q, Zhao, Y.
Deposit date:2014-04-11
Release date:2014-06-25
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structural basis for lipopolysaccharide insertion in the bacterial outer membrane.
Nature, 511, 2014
4Q79
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BU of 4q79 by Molmil
Structure of a HG-derivative CsgG
Descriptor: CsgG, MERCURY (II) ION
Authors:Huang, Y, Zhang, C.X, Cao, B, Zhao, Y, Kou, Y, Ni, D.
Deposit date:2014-04-24
Release date:2014-12-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the nonameric bacterial amyloid secretion channel
Proc.Natl.Acad.Sci.USA, 111, 2014
8SRK
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BU of 8srk by Molmil
Cryo-EM structure of TRPM2 chanzyme (without NUDT9-H domain) in the presence of Ca and ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, CHOLESTEROL, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRE
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BU of 8sre by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, closed state
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRI
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BU of 8sri by Molmil
Cryo-EM structure of TRPM2 chanzyme (E1114A) in the presence of Magnesium and ADP-ribose, closed state
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRH
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BU of 8srh by Molmil
Cryo-EM structure of TRPM2 chanzyme (E1114A) in the presence of Magnesium and ADP-ribose, open state
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRG
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BU of 8srg by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Descriptor: 5-O-phosphono-beta-D-ribofuranose, ADENOSINE MONOPHOSPHATE, CHOLESTEROL, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRF
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BU of 8srf by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, ADP-ribose, Adenosine monophosphate, and Ribose-5-phosphate, closed state
Descriptor: 5-O-phosphono-beta-D-ribofuranose, ADENOSINE MONOPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
8SRD
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BU of 8srd by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, open state
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution
To Be Published
7CFG
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BU of 7cfg by Molmil
Structure of the transmembrane domain of the bacterial CNNM/CorC family Mg2+ transporter in complex with Mg2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Hemolysin, MAGNESIUM ION, ...
Authors:Huang, Y, Jin, F, Hattori, M.
Deposit date:2020-06-25
Release date:2021-02-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the Mg 2+ recognition and regulation of the CorC Mg 2+ transporter.
Sci Adv, 7, 2021
7CFF
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BU of 7cff by Molmil
Structure of the thermostabilized transmembrane domain of the bacterial CNNM/CorC family Mg2+ transporter in complex with Mg2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hemolysin, ...
Authors:Huang, Y, Jin, F, Hattori, M.
Deposit date:2020-06-25
Release date:2021-02-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the Mg 2+ recognition and regulation of the CorC Mg 2+ transporter.
Sci Adv, 7, 2021
7CFI
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BU of 7cfi by Molmil
Structure of the CBS domain of the bacterial CNNM/CorC family Mg2+ transporter in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Hemolysin, MAGNESIUM ION
Authors:Huang, Y, Jin, F, Hattori, M.
Deposit date:2020-06-25
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for the Mg 2+ recognition and regulation of the CorC Mg 2+ transporter.
Sci Adv, 7, 2021
8YLC
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BU of 8ylc by Molmil
The crystal structure of PDE4D with Amentoflavone
Descriptor: 3',5'-cyclic-AMP phosphodiesterase 4D, 8-[5-[5,7-bis(oxidanyl)-4-oxidanylidene-chromen-2-yl]-2-oxidanyl-phenyl]-2-(4-hydroxyphenyl)-5,7-bis(oxidanyl)chromen-4-one, MAGNESIUM ION, ...
Authors:Huang, Y.-Y, Luo, H.-B.
Deposit date:2024-03-06
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.30003715 Å)
Cite:Discovery of amentoflavone as a natural PDE4 inhibitor with anti-fibrotic effects
Chin.Chem.Lett., 2024
6TQN
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BU of 6tqn by Molmil
rrn anti-termination complex without S4
Descriptor: 30S ribosomal protein S10, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N.
Deposit date:2019-12-17
Release date:2020-08-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis.
Mol.Cell, 79, 2020
6TQO
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BU of 6tqo by Molmil
rrn anti-termination complex
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S4, DNA-directed RNA polymerase subunit alpha, ...
Authors:Huang, Y.H, Wahl, M.C, Loll, B, Hilal, T, Said, N.
Deposit date:2019-12-17
Release date:2020-08-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis.
Mol.Cell, 79, 2020
4QXW
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BU of 4qxw by Molmil
Crystal structure of the human CEACAM1 membrane distal amino terminal (N)-domain
Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 1, MALONIC ACID, octyl beta-D-glucopyranoside
Authors:Huang, Y.H, Gandhi, A.K, Russell, A, Kondo, Y, Chen, Q, Petsko, G.A, Blumberg, R.S.
Deposit date:2014-07-22
Release date:2014-11-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:CEACAM1 regulates TIM-3-mediated tolerance and exhaustion.
Nature, 517, 2015
7RMR
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BU of 7rmr by Molmil
Crystal structure of [I11L]cycloviolacin O2
Descriptor: D-[I11L]cycloviolacin O2, THIOCYANATE ION, [I11L]cycloviolacin O2
Authors:Huang, Y.H, Du, Q, Craik, D.J.
Deposit date:2021-07-28
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules, 26, 2021
7RMQ
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BU of 7rmq by Molmil
Crystal structure of cycloviolacin O2
Descriptor: Cycloviolacin O2, D-[I11L]cycloviolacin O2, FORMIC ACID
Authors:Huang, Y.H, Du, Q.
Deposit date:2021-07-28
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules, 26, 2021
7RMS
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BU of 7rms by Molmil
Crystal structure of [I11G]cycloviolacin O2
Descriptor: D-[I11L]cycloviolacin O2, THIOCYANATE ION, [I11L]cycloviolacin O2
Authors:Huang, Y.H, Du, Q, Craik, D.J.
Deposit date:2021-07-28
Release date:2021-09-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules, 26, 2021
8SRA
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BU of 8sra by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Calcium
Descriptor: CALCIUM ION, CHOLESTEROL, TRPM2 chanzyme
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution.
Nat.Struct.Mol.Biol., 2024
8SR9
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BU of 8sr9 by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium
Descriptor: CHOLESTEROL, MAGNESIUM ION, TRPM2 chanzyme
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution.
Nat.Struct.Mol.Biol., 2024
8SR8
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BU of 8sr8 by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA (apo state)
Descriptor: CHOLESTEROL, TRPM2 chanzyme
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution.
Nat.Struct.Mol.Biol., 2024
8SRB
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BU of 8srb by Molmil
Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA and ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CHOLESTEROL, TRPM2 chanzyme
Authors:Huang, Y, Kumar, S, Lu, W, Du, J.
Deposit date:2023-05-05
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Coupling enzymatic activity and gating in an ancient TRPM chanzyme and its molecular evolution.
Nat.Struct.Mol.Biol., 2024
7CFH
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BU of 7cfh by Molmil
Structure of the CBS domain of the bacterial CNNM/CorC family Mg2+ transporter
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Hemolysin
Authors:Huang, Y, Jin, F, Hattori, M.
Deposit date:2020-06-25
Release date:2021-02-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the Mg 2+ recognition and regulation of the CorC Mg 2+ transporter.
Sci Adv, 7, 2021
1KKG
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BU of 1kkg by Molmil
NMR Structure of Ribosome-Binding Factor A (RbfA)
Descriptor: ribosome-binding factor A
Authors:Huang, Y.J, Swapna, G.V.T, Rajan, P.K, Ke, H, Xia, B, Shukla, K, Inouye, M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2001-12-07
Release date:2003-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR Structure of Ribosome-binding Factor A (RbfA), A Cold-shock Adaptation Protein from Escherichia coli
J.Mol.Biol., 327, 2003

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