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PDB: 92 件

3RMP
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Structural basis for the recognition of attP substrates by P4-like integrases
分子名称: 5'-D(*TP*AP*AP*TP*GP*AP*CP*CP*AP*CP*CP*AP*AP*TP*A)-3', 5'-D(*TP*AP*TP*TP*GP*GP*TP*GP*GP*TP*CP*AP*TP*TP*A)-3', CP4-like integrase
著者Szwagierczak, A, Popowicz, G.M, Holak, T.A, Rakin, A, Antonenka, U.
登録日2011-04-21
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural basis for the recognition of attP substrates by P4-like integrases
To be Published
6R3K
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Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
分子名称: (2~{S},4~{R})-1-[[5-chloranyl-2-[(3-cyanophenyl)methoxy]-4-[[3-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-phenyl]methoxy]phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxylic acid, 1,2-ETHANEDIOL, Programmed cell death 1 ligand 1
著者Zak, K.M, Grudnik, P, Skalniak, L, Dubin, G, Holak, T.A.
登録日2019-03-20
公開日2019-04-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Terphenyl-Based Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1 Protein-Protein Interaction.
J.Med.Chem., 64, 2021
6RPG
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Structure of human Programmed cell death 1 ligand 1 (PD-L1) with inhibitor
分子名称: Programmed cell death 1 ligand 1, ~{N}-[2-[[4-[[3-[3-[[4-[(2-acetamidoethylamino)methyl]-5-[(5-cyanopyridin-3-yl)methoxy]-2-methyl-phenoxy]methyl]-2-methyl-phenyl]-2-methyl-phenyl]methoxy]-2-[(5-cyanopyridin-3-yl)methoxy]-5-methyl-phenyl]methylamino]ethyl]ethanamide
著者Magiera-Mularz, K, Basu, S, Yang, J, Xu, B, Skalniak, L, Musielak, B, Kholodovych, V, Holak, T.A, Hu, L.
登録日2019-05-14
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Design, Synthesis, Evaluation, and Structural Studies ofC2-Symmetric Small Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1 Protein-Protein Interaction.
J.Med.Chem., 62, 2019
6SRU
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Structure of Ig-like V-type domian of mouse Programmed cell death 1 ligand 1 (PD-L1)
分子名称: Programmed cell death 1 ligand 1
著者Magiera-Mularz, K, Sala, D, Grudnik, P, Holak, T.A.
登録日2019-09-06
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.532 Å)
主引用文献Human and mouse PD-L1: similar molecular structure, but different druggability profiles.
Iscience, 24, 2021
2GRC
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1.5 A structure of bromodomain from human BRG1 protein, a central ATPase of SWI/SNF remodeling complex
分子名称: Probable global transcription activator SNF2L4
著者Singh, M, Popowicz, G.M, Krajewski, M, Holak, T.A.
登録日2006-04-24
公開日2007-05-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural ramification for acetyl-lysine recognition by the bromodomain of human BRG1 protein, a central ATPase of the SWI/SNF remodeling complex.
Chembiochem, 8, 2007
1GNC
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STRUCTURE AND DYNAMICS OF THE HUMAN GRANULOCYTE COLONY-STIMULATING FACTOR DETERMINED BY NMR SPECTROSCOPY. LOOP MOBILITY IN A FOUR-HELIX-BUNDLE PROTEIN
分子名称: GRANULOCYTE COLONY-STIMULATING FACTOR
著者Zink, T.W, Ross, A, Rudolph, R, Holak, T.A.
登録日1994-03-08
公開日1994-07-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Structure and dynamics of the human granulocyte colony-stimulating factor determined by NMR spectroscopy. Loop mobility in a four-helix-bundle protein.
Biochemistry, 33, 1994
1HCE
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STRUCTURE OF HISACTOPHILIN IS SIMILAR TO INTERLEUKIN-1 BETA AND FIBROBLAST GROWTH FACTOR
分子名称: HISACTOPHILIN
著者Habazettl, J, Gondol, D, Wiltscheck, R, Otlewski, J, Schleicher, M, Holak, T.A.
登録日1994-07-12
公開日1994-09-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of hisactophilin is similar to interleukin-1 beta and fibroblast growth factor.
Nature, 359, 1992
1HCD
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STRUCTURE OF HISACTOPHILIN IS SIMILAR TO INTERLEUKIN-1 BETA AND FIBROBLAST GROWTH FACTOR
分子名称: HISACTOPHILIN
著者Habazettl, J, Gondol, D, Wiltscheck, R, Otlewski, J, Schleicher, M, Holak, T.A.
登録日1994-05-03
公開日1994-10-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of hisactophilin is similar to interleukin-1 beta and fibroblast growth factor.
Nature, 359, 1992
3TC5
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Selective targeting of disease-relevant protein binding domains by O-phosphorylated natural product derivatives
分子名称: (11alpha,16alpha)-9-fluoro-11,17-dihydroxy-16-methyl-3,20-dioxopregna-1,4-dien-21-yl dihydrogen phosphate, HEXAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Graeber, M, Janczyk, W, Sperl, B, Elumalai, N, Kozany, C, Hausch, F, Holak, T.A, Berg, T.
登録日2011-08-08
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Selective targeting of disease-relevant protein binding domains by o-phosphorylated natural product derivatives.
Acs Chem.Biol., 6, 2011
3TJ2
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Structure of a novel submicromolar MDM2 inhibitor
分子名称: 3-{(1S)-2-(tert-butylamino)-1-[(4-chlorobenzyl)(formyl)amino]-2-oxoethyl}-6-chloro-1H-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2, POTASSIUM ION
著者Wolf, S, Huang, Y, Popowicz, G.M, Goda, S, Holak, T.A, Doemling, A.
登録日2011-08-23
公開日2012-09-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ugi Multicomponent Reaction Derived p53-Mdm2 Antagonists
To be published
3TU1
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Exhaustive Fluorine Scanning towards Potent p53-MDM2 Antagonist
分子名称: 3-[(1S)-2-(tert-butylamino)-1-{N-[(3,4-difluorophenyl)methyl]formamido}-2-oxoethyl]-6-chloro-1H-indole-2-carboxylic acid, E3 ubiquitin-protein ligase Mdm2
著者Wolf, S, Huang, Y, Koes, D, Popowicz, G.M, Camacho, C.J, Holak, T.A, Doemling, A.
登録日2011-09-15
公開日2011-11-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Exhaustive Fluorine Scanning toward Potent p53-Mdm2 Antagonists.
Chemmedchem, 7, 2012
3V3B
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Structure of the Stapled p53 Peptide Bound to Mdm2
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, SAH-p53-8 stapled-peptide
著者Baek, S, Kutchukian, P.S, Verdine, G.L, Huber, R, Holak, T.A, Ki Won, L, Popowicz, G.M.
登録日2011-12-13
公開日2012-01-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the stapled p53 peptide bound to Mdm2.
J.Am.Chem.Soc., 134, 2012
3V3V
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Structural and functional analysis of quercetagetin, a natural JNK1 inhibitor
分子名称: 3,5,6,7-TETRAHYDROXY-2-(3,4-DIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, C-Jun-amino-terminal kinase-interacting protein 1, CHLORIDE ION, ...
著者Baek, S, Kang, N.J, Popowicz, G.M, Arciniega, M, Jung, S.K, Byun, S, Song, N.R, Heo, Y.S, Kim, B.Y, Lee, H.J, Holak, T.A, Augustin, M, Bode, A.M, Huber, R, Dong, Z, Lee, K.W.
登録日2011-12-14
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Functional Analysis of the Natural JNK1 Inhibitor Quercetagetin.
J.Mol.Biol., 425, 2013
2Z5S
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Molecular basis for the inhibition of p53 by Mdmx
分子名称: Cellular tumor antigen p53, Mdm4 protein
著者Popowicz, G.M, Czarna, A, Rothweiler, U, Szwagierczak, A, Holak, T.A.
登録日2007-07-17
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis for the inhibition of p53 by Mdmx.
Cell Cycle, 6, 2007
2Z5T
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Molecular basis for the inhibition of p53 by Mdmx
分子名称: Cellular tumor antigen p53, Mdm4 protein
著者Popowicz, G.M, Czarna, A, Rothweiler, U, Szwagierczak, A, Holak, T.A.
登録日2007-07-17
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis for the inhibition of p53 by Mdmx.
Cell Cycle, 6, 2007
4ZQK
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Structure of the complex of human programmed death-1 (PD-1) and its ligand PD-L1.
分子名称: Programmed cell death 1 ligand 1, Programmed cell death protein 1, SODIUM ION
著者Zak, K.M, Dubin, G, Holak, T.A.
登録日2015-05-10
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of the Complex of Human Programmed Death 1, PD-1, and Its Ligand PD-L1.
Structure, 23, 2015
4ZFI
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Structure of Mdm2 with low molecular weight inhibitor
分子名称: (5S)-3,5-bis(4-chlorobenzyl)-4-(6-chloro-1H-indol-3-yl)-5-hydroxy-1-methyl-1,5-dihydro-2H-pyrrol-2-one, E3 ubiquitin-protein ligase Mdm2
著者Zak, K.M, Twarda-Clapa, A, Wrona, E.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2015-04-21
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Unique Mdm2-Binding Mode of the 3-Pyrrolin-2-one- and 2-Furanone-Based Antagonists of the p53-Mdm2 Interaction.
ACS Chem. Biol., 11, 2016
4ZGK
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Structure of Mdm2 with low molecular weight inhibitor.
分子名称: (5R)-3,5-bis(4-chlorobenzyl)-4-(6-chloro-1H-indol-3-yl)-5-hydroxyfuran-2(5H)-one, E3 ubiquitin-protein ligase Mdm2
著者Twarda-Clapa, A, Zak, K.M, Wrona, E.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2015-04-23
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Unique Mdm2-Binding Mode of the 3-Pyrrolin-2-one- and 2-Furanone-Based Antagonists of the p53-Mdm2 Interaction.
ACS Chem. Biol., 11, 2016
5C3T
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PD-1 binding domain from human PD-L1
分子名称: Programmed cell death 1 ligand 1
著者Zak, K.M, Dubin, G, Holak, T.A.
登録日2015-06-17
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Complex of Human Programmed Death 1, PD-1, and Its Ligand PD-L1.
Structure, 23, 2015
3DAC
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Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain
分子名称: Cellular tumor antigen p53, Mdm4 protein
著者Popowicz, G.M, Czarna, A, Holak, T.A.
登録日2008-05-29
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain.
Cell Cycle, 7, 2008
3DAB
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Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain
分子名称: Cellular tumor antigen p53, Mdm4 protein
著者Popowicz, G.M, Czarna, A, Holak, T.A.
登録日2008-05-29
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain.
Cell Cycle, 7, 2008
1AG4
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NMR STRUCTURE OF SPHERULIN 3A (S3A) FROM PHYSARUM POLYCEPHALUM, MINIMIZED AVERAGE STRUCTURE
分子名称: SPHERULIN 3A
著者Rosinke, B, Renner, C, Mayr, E.-M, Jaenicke, R, Holak, T.A.
登録日1997-04-01
公開日1998-04-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ca2+-loaded spherulin 3a from Physarum polycephalum adopts the prototype gamma-crystallin fold in aqueous solution.
J.Mol.Biol., 271, 1997
1A23
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SOLUTION NMR STRUCTURE OF REDUCED DSBA FROM ESCHERICHIA COLI, MINIMIZED AVERAGE STRUCTURE
分子名称: DSBA
著者Schirra, H.J, Renner, C, Czisch, M, Huber-Wunderlich, M, Holak, T.A, Glockshuber, R.
登録日1998-01-15
公開日1998-09-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of reduced DsbA from Escherichia coli in solution.
Biochemistry, 37, 1998
1A24
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SOLUTION NMR STRUCTURE OF REDUCED DSBA FROM ESCHERICHIA COLI, FAMILY OF 20 STRUCTURES
分子名称: DSBA
著者Schirra, H.J, Renner, C, Czisch, M, Huber-Wunderlich, M, Holak, T.A, Glockshuber, R.
登録日1998-01-15
公開日1998-09-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of reduced DsbA from Escherichia coli in solution.
Biochemistry, 37, 1998
3FDO
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Structure of human MDMX in complex with high affinity peptide
分子名称: MAGNESIUM ION, Protein Mdm4, Synthetic high affinity peptide
著者Czarna, A.L, Popowicz, G.M, Holak, T.A.
登録日2008-11-26
公開日2008-12-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High affinity interaction of the p53 peptide-analogue with human Mdm2 and Mdmx.
Cell Cycle, 8, 2009

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