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PDB: 34 件

1A2Y
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HEN EGG WHITE LYSOZYME, D18A MUTANT, IN COMPLEX WITH MOUSE MONOCLONAL ANTIBODY D1.3
分子名称: IGG1-KAPPA D1.3 FV (HEAVY CHAIN), IGG1-KAPPA D1.3 FV (LIGHT CHAIN), LYSOZYME, ...
著者Tsuchiya, D, Mariuzza, R.A.
登録日1998-01-13
公開日1998-04-29
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A mutational analysis of binding interactions in an antigen-antibody protein-protein complex.
Biochemistry, 37, 1998
8YM7
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Crystal structure of Lysine Specific Demethylase 1 (LSD1) with JH-45
分子名称: 4-[5-(4-azanylpiperidin-1-yl)-8-(4-methylphenyl)pyrido[3,4-b]pyrazin-7-yl]-2-fluoranyl-benzenecarbonitrile, FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1A, ...
著者Zhiyan, D, Danyan, C, Hong, J, Tongchao, L, Bing, X.
登録日2024-03-08
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Discovery of Novel LSD1 Inhibitors for the Treatment of Autosomal Dominant Polycystic Kidney Disease
To Be Published
2AYQ
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3-ISOPROPYLMALATE DEHYDROGENASE FROM THE MODERATE FACULTATIVE THERMOPHILE, BACILLUS COAGULANS
分子名称: 3-ISOPROPYLMALATE DEHYDROGENASE
著者Tsuchiya, D, Takenaka, A.
登録日1998-02-20
公開日1998-05-27
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of 3-isopropylmalate dehydrogenase from the moderate facultative thermophile, Bacillus coagulans: two strategies for thermostabilization of protein structures.
J.Biochem.(Tokyo), 122, 1997
1ISS
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Crystal Structure of Metabotropic Glutamate Receptor Subtype 1 Complexed with an antagonist
分子名称: (S)-(ALPHA)-METHYL-4-CARBOXYPHENYLGLYCINE, Metabotropic Glutamate Receptor subtype 1
著者Tsuchiya, D, Kunishima, N, Kamiya, N, Jingami, H, Morikawa, K.
登録日2001-12-21
公開日2002-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural views of the ligand-binding cores of a metabotropic glutamate receptor complexed with an antagonist and both glutamate and Gd3+.
Proc.Natl.Acad.Sci.USA, 99, 2002
1ISR
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Crystal Structure of Metabotropic Glutamate Receptor Subtype 1 Complexed with Glutamate and Gadolinium Ion
分子名称: GADOLINIUM ATOM, GLUTAMIC ACID, Metabotropic Glutamate Receptor subtype 1
著者Tsuchiya, D, Kunishima, N, Kamiya, N, Jingami, H, Morikawa, K.
登録日2001-12-21
公開日2002-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural views of the ligand-binding cores of a metabotropic glutamate receptor complexed with an antagonist and both glutamate and Gd3+.
Proc.Natl.Acad.Sci.USA, 99, 2002
2D3T
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Fatty Acid beta-oxidation multienzyme complex from Pseudomonas Fragi, Form V
分子名称: 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, Fatty oxidation complex alpha subunit, ...
著者Tsuchiya, D, Shimizu, N, Ishikawa, M, Suzuki, Y, Morikawa, K.
登録日2005-10-01
公開日2006-02-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Ligand-Induced Domain Rearrangement of Fatty Acid beta-Oxidation Multienzyme Complex
Structure, 14, 2006
4Y7S
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Crystal Structure of the CFEM protein Csa2
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, HEME B/C, ...
著者Dvir, H, Weissman, Z, Nasser, L, Hiya, D, Kornitzer, D.
登録日2015-02-16
公開日2016-08-03
最終更新日2016-10-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of haem-iron acquisition by fungal pathogens.
Nat Microbiol, 1, 2016
8WIU
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Bromodomain and Extra-terminal Domain (BET) BRD4
分子名称: 7-[5-[1-(cyclopropylmethyl)-3,5-dimethyl-pyrazol-4-yl]pyridin-3-yl]-1~{H}-imidazo[4,5-b]pyridine, Isoform C of Bromodomain-containing protein 4
著者Cao, D, Zhiyan, D, Xiong, B.
登録日2023-09-25
公開日2024-01-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Discovery of a brain-permeable bromodomain and extra terminal domain (BET) inhibitor with selectivity for BD1 for the treatment of multiple sclerosis.
Eur.J.Med.Chem., 265, 2023
8IBQ
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Bromodomain and Extra-terminal Domain (BET) BRD4
分子名称: 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine, Bromodomain-containing protein 4
著者Cao, D, Zhiyan, D, Xiong, B.
登録日2023-02-10
公開日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Discovery of 1 H -Imidazo[4,5- b ]pyridine Derivatives as Potent and Selective BET Inhibitors for the Management of Neuropathic Pain.
J.Med.Chem., 66, 2023
8IDH
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Bromodomain and Extra-terminal Domain (BET) BRD4
分子名称: 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine, Bromodomain-containing protein 4
著者Cao, D, Zhiyan, D, Xiong, B.
登録日2023-02-13
公開日2023-10-04
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Discovery of 1 H -Imidazo[4,5- b ]pyridine Derivatives as Potent and Selective BET Inhibitors for the Management of Neuropathic Pain.
J.Med.Chem., 66, 2023
4EIW
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Whole cytosolic region of atp-dependent metalloprotease FtsH (G399L)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH
著者Suno, R, Niwa, H, Tsuchiya, D, Yoshida, M, Morikawa, K.
登録日2012-04-06
公開日2012-06-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structure of the whole cytosolic region of ATP-dependent protease FtsH
Mol.Cell, 22, 2006
1GEF
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Crystal structure of the archaeal holliday junction resolvase HJC
分子名称: HOLLIDAY JUNCTION RESOLVASE, SULFATE ION
著者Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
登録日2000-11-08
公開日2001-03-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition.
Structure, 9, 2001
1IO2
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Crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1
分子名称: RIBONUCLEASE HII
著者Muroya, A, Tsuchiya, D, Ishikawa, M, Haruki, M, Morikawa, M.
登録日2000-12-28
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Catalytic center of an archaeal type 2 ribonuclease H as revealed by X-ray crystallographic and mutational analyses.
Protein Sci., 10, 2001
1YXK
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Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) disulfide-linked dimer
分子名称: oxidised low density lipoprotein (lectin-like) receptor 1
著者Ohki, I, Ishigaki, T, Oyama, T, Matsunaga, S, Xie, Q, Ohnishi-Kameyama, M, Murata, T, Tsuchiya, D, Machida, S, Morikawa, K, Tate, S.
登録日2005-02-22
公開日2005-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.
Structure, 13, 2005
1WP9
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Crystal structure of Pyrococcus furiosus Hef helicase domain
分子名称: ATP-dependent RNA helicase, putative, PHOSPHATE ION
著者Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K.
登録日2004-08-31
公開日2005-02-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing
Structure, 13, 2005
1WDK
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fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)
分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, ...
著者Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
登録日2004-05-17
公開日2004-07-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004
1WDL
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fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4)
分子名称: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, ...
著者Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
登録日2004-05-17
公開日2004-07-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004
1WDM
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fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native3)
分子名称: 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, Fatty oxidation complex alpha subunit, ...
著者Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
登録日2004-05-17
公開日2004-07-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004
1YXJ
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Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) at low pH
分子名称: 1,2-ETHANEDIOL, oxidised low density lipoprotein (lectin-like) receptor 1
著者Ohki, I, Ishigaki, T, Oyama, T, Matsunaga, S, Xie, Q, Ohnishi-Kameyama, M, Murata, T, Tsuchiya, D, Machida, S, Morikawa, K, Tate, S.
登録日2005-02-22
公開日2005-06-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of human lectin-like, oxidized low-density lipoprotein receptor 1 ligand binding domain and its ligand recognition mode to OxLDL.
Structure, 13, 2005
2E4X
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Crystal structure of the extracellular region of the group II metabotropic glutamate receptor complexed with 1S,3R-ACPD
分子名称: (1S,3R)-1-AMINOCYCLOPENTANE-1,3-DICARBOXYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
著者Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
登録日2006-12-17
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E4U
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Crystal structure of the extracellular region of the group II metabotropic glutamate receptor complexed with L-glutamate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, Metabotropic glutamate receptor 3
著者Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
登録日2006-12-17
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E4Y
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Crystal structure of the extracellular region of the group II metabotropic glutamate receptor complexed with 2R,4R-APDC
分子名称: (2R,4R)-4-aminopyrrolidine-2,4-dicarboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
著者Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
登録日2006-12-17
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E4W
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Crystal structure of the extracellular region of the group II metabotropic glutamate receptor complexed with 1S,3S-ACPD
分子名称: (1S,3S)-1-aminocyclopentane-1,3-dicarboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
著者Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
登録日2006-12-17
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E4V
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Crystal structure of the extracellular region of the group II metabotropic glutamate receptor complexed with DCG-IV
分子名称: (1R,2R)-3-[(S)-amino(carboxy)methyl]cyclopropane-1,2-dicarboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
著者Muto, T, Tsuchiya, D, Morikawa, K, Jingami, H.
登録日2006-12-17
公開日2007-02-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of the extracellular regions of the group II/III metabotropic glutamate receptors
Proc.Natl.Acad.Sci.Usa, 104, 2007
1WRI
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Crystal Structure of Ferredoxin isoform II from E. arvense
分子名称: BENZAMIDINE, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin II
著者Kurisu, G, Nishiyama, D, Kusunoki, M, Fujikawa, S, Katoh, M, Hanke, G.T, Hase, T, Teshima, K.
登録日2004-10-18
公開日2004-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献A structural basis of Equisetum arvense ferredoxin isoform II producing an alternative electron transfer with ferredoxin-NADP+ reductase.
J.Biol.Chem., 280, 2005

 

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