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PDB: 362 件

7EI2
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Structure of human NNMT in complex with macrocyclic peptide 8
分子名称: Nicotinamide N-methyltransferase, macrocyclic peptide 8
著者Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
登録日2021-03-30
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7EHZ
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Structure of human NNMT in complex with macrocyclic peptide 2
分子名称: Nicotinamide N-methyltransferase, macrocyclic peptide 2
著者Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
登録日2021-03-30
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7EGU
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Structure of human NNMT in complex with macrocyclic peptide X
分子名称: Nicotinamide N-methyltransferase, macrocyclic peptide X
著者Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
登録日2021-03-26
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
8SEH
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PHF Tau from Down Syndrome
分子名称: Microtubule-associated protein tau
著者Hoq, M.R, Bharath, S.R, Jiang, W, Vago, F.S.
登録日2023-04-10
公開日2024-04-03
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
8SEK
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Type IIIa beta-amyloid 40 Filaments from Down syndrome
分子名称: Type IIIb beta-amyloid 40 Filament
著者Hoq, M.R, Vago, F.S, Bharath, S.R, Jiang, W.
登録日2023-04-10
公開日2024-04-03
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
8SEJ
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Type I beta-amyloid 42 Filaments from Down syndrome
分子名称: Amyloid-beta protein 42
著者Hoq, M.R, Bharath, S.R, Vago, F.S, Jiang, W.
登録日2023-04-10
公開日2024-04-03
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
7BV7
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INTS3 complexed with INTS6
分子名称: Integrator complex subunit 3, Integrator complex subunit 6
著者Jia, Y, Bharath, S.R, Song, H.
登録日2020-04-09
公開日2021-07-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the INTS3/INTS6 complex reveals the functional importance of INTS3 dimerization in DSB repair.
Cell Discov, 7, 2021
5L8H
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Structure of USP46-UbVME
分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 46, ZINC ION
著者Clerici, M, Sixma, T, Dharadhar, S.
登録日2016-06-07
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A conserved two-step binding for the UAF1 regulator to the USP12 deubiquitinating enzyme.
J.Struct.Biol., 196, 2016
6M01
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The structure of HitB-HitD complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
著者Miyanaga, A, Kurihara, S, Kudo, F, Eguchi, T.
登録日2020-02-19
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Characterization of Complex of Adenylation Domain and Carrier Protein by Using Pantetheine Cross-Linking Probe.
Acs Chem.Biol., 15, 2020
5JXE
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Human PD-1 ectodomain complexed with Pembrolizumab Fab
分子名称: Pembrolizumab Fab heavy chain, Pembrolizumab Fab light chain, Programmed cell death protein 1
著者Na, Z, Bharath, S.R, Song, H.
登録日2016-05-13
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for blocking PD-1-mediated immune suppression by therapeutic antibody pembrolizumab.
Cell Res., 27, 2017
6LP1
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Crystal structure of acetate:succinate CoA transferase (ASCT) from Trypanosoma brucei.
分子名称: CALCIUM ION, GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase
著者Mochizuki, K, Inaoka, D.K, Shiba, T, Fukuda, K, Kurasawa, H, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Balogun, E.O, Harada, S, Hirayama, K, Kita, K.
登録日2020-01-08
公開日2020-10-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei.
Biochim Biophys Acta Bioenerg, 1861, 2020
6XN4
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Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex
分子名称: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
著者Rai, J, Sridhara, S, Li, H.
登録日2020-07-02
公開日2022-01-12
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN5
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Structure of the Lactococcus lactis Csm Apo- CRISPR-Cas Complex
分子名称: CRISPR-associated protein Cas10, CRISPR-associated protein Csm3, CRISPR-associated protein Csm4, ...
著者Rai, J, Sridhara, S, Li, H.
登録日2020-07-02
公開日2022-01-12
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN3
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Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex
分子名称: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
著者Rai, J, Sridhara, S, Li, H.
登録日2020-07-02
公開日2022-01-12
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN7
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Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex
分子名称: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
著者Rai, J, Sridhara, S, Li, H.
登録日2020-07-02
公開日2022-01-12
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
7JG1
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Dimeric Immunoglobin A (dIgA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
著者Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
登録日2020-07-18
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
7XOH
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Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative cystathionine beta-synthase Rv1077
著者Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
登録日2022-05-01
公開日2022-05-25
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022
7XOY
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Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine and serine.
分子名称: Putative cystathionine beta-synthase Rv1077, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
著者Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
登録日2022-05-01
公開日2022-05-25
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022
7JG2
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Secretory Immunoglobin A (SIgA)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
著者Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
登録日2020-07-18
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
7WMT
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Crystal structure of small molecule 13 bound to human Nicotinamide N-methyltransferase
分子名称: Nicotinamide N-methyltransferase, [(2~{R},4~{S})-4-[2-(aminomethyl)imidazol-1-yl]-2-[1-[(4-chlorophenyl)methyl]-5-methyl-indol-2-yl]pyrrolidin-1-yl]-(1~{H}-pyrrolo[2,3-b]pyridin-5-yl)methanone
著者Yoshida, S, Uehara, S, Kondo, N, Takahashi, Y, Yamamoto, S, Kameda, A, Kawagoe, S, Inoue, N, Yamada, M, Yoshimura, N, Tachibana, Y.
登録日2022-01-17
公開日2022-08-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Peptide-to-Small Molecule: A Pharmacophore-Guided Small Molecule Lead Generation Strategy from High-Affinity Macrocyclic Peptides.
J.Med.Chem., 65, 2022
7XNZ
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Native cystathionine beta-synthase of Mycobacterium tuberculosis.
分子名称: PYRIDOXAL-5'-PHOSPHATE, Putative cystathionine beta-synthase Rv1077
著者Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
登録日2022-04-30
公開日2022-05-25
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022
7WMC
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Crystal structure of macrocyclic peptide 1 bound to human Nicotinamide N-methyltransferase
分子名称: Nicotinamide N-methyltransferase, Peptide1
著者Yoshida, S, Uehara, S, Kondo, N, Takahashi, Y, Yamamoto, S, Kameda, A, Kawagoe, S, Inoue, N, Yamada, M, Yoshimura, N, Tachibana, Y.
登録日2022-01-14
公開日2022-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Peptide-to-Small Molecule: A Pharmacophore-Guided Small Molecule Lead Generation Strategy from High-Affinity Macrocyclic Peptides.
J.Med.Chem., 65, 2022
7X17
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Structure of Pseudomonas NRPS protein, AmbB-TC bound to Ppant-L-Ala
分子名称: AMB antimetabolite synthase AmbB, S-[2-[3-[[(2S)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (2R)-2-azanylpropanethioate
著者ChuYuanKee, M, Bharath, S.R, Song, H.
登録日2022-02-23
公開日2022-07-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the substrate-bound condensation domains of non-ribosomal peptide synthetase AmbB.
Sci Rep, 12, 2022
6M1B
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A new V27M variant of beta 2 microglobulin induced amyloidosis in a patient with long-term hemodialysis
分子名称: Beta-2-microglobulin, CALCIUM ION, GLYCEROL, ...
著者So, M, Nakahara, S, Nakaniwa, T, Tanaka, H, Kurisu, G, Goto, Y.
登録日2020-02-25
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Dialysis-related amyloidosis associated with a novel beta 2 -microglobulin variant.
Amyloid, 28, 2021
7X0F
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Structure of Pseudomonas NRPS protein, AmbB-TC bound to Ppant
分子名称: 4'-PHOSPHOPANTETHEINE, AMB antimetabolite synthase AmbB
著者ChuYuanKee, M, Bharath, S.R, Song, H.
登録日2022-02-22
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into the substrate-bound condensation domains of non-ribosomal peptide synthetase AmbB.
Sci Rep, 12, 2022

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