Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 366 results

9CZI
DownloadVisualize
BU of 9czi by Molmil
Paired helical tau filaments in dominantly inherited Alzheimer disease with cotton wool plaques
Descriptor: Microtubule-associated protein tau
Authors:Hoq, M.R, Vago, F.S, Ozcan, K.A, Bharath, S.R.
Deposit date:2024-08-05
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of cotton wool plaques' amyloid beta and of tau filaments in dominantly inherited Alzheimer disease.
Acta Neuropathol, 148, 2024
8SEI
DownloadVisualize
BU of 8sei by Molmil
SF Tau from Down Syndrome
Descriptor: Microtubule-associated protein tau
Authors:Hoq, M.R, Bharath, S.R, Jiang, W, Vago, F.S, Bharath, S.R.
Deposit date:2023-04-10
Release date:2024-04-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
7EI2
DownloadVisualize
BU of 7ei2 by Molmil
Structure of human NNMT in complex with macrocyclic peptide 8
Descriptor: Nicotinamide N-methyltransferase, macrocyclic peptide 8
Authors:Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
Deposit date:2021-03-30
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7BV7
DownloadVisualize
BU of 7bv7 by Molmil
INTS3 complexed with INTS6
Descriptor: Integrator complex subunit 3, Integrator complex subunit 6
Authors:Jia, Y, Bharath, S.R, Song, H.
Deposit date:2020-04-09
Release date:2021-07-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the INTS3/INTS6 complex reveals the functional importance of INTS3 dimerization in DSB repair.
Cell Discov, 7, 2021
7EHZ
DownloadVisualize
BU of 7ehz by Molmil
Structure of human NNMT in complex with macrocyclic peptide 2
Descriptor: Nicotinamide N-methyltransferase, macrocyclic peptide 2
Authors:Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
Deposit date:2021-03-30
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
7EGU
DownloadVisualize
BU of 7egu by Molmil
Structure of human NNMT in complex with macrocyclic peptide X
Descriptor: Nicotinamide N-methyltransferase, macrocyclic peptide X
Authors:Hayashi, K, Mikamiyama, H, Uehara, S, Yamamoto, S, Cary, D, Nishikawa, J, Ueda, T, Ozasa, H, Mihara, K, Yoshimura, N, Kawai, T, Ono, T, Yamamoto, S, Fumoto, M.
Deposit date:2021-03-26
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Macrocyclic Peptides as a Novel Class of NNMT Inhibitors: A SAR Study Aimed at Inhibitory Activity in the Cell.
Acs Med.Chem.Lett., 12, 2021
8SEL
DownloadVisualize
BU of 8sel by Molmil
Type IIIb beta-amyloid 40 Filaments from Down Syndrome
Descriptor: Amyloid-beta protein 40
Authors:Hoq, M.R, Vago, F.S, Bharath, S.R, Jiang, W.
Deposit date:2023-04-10
Release date:2024-04-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
6XN4
DownloadVisualize
BU of 6xn4 by Molmil
Structure of the Lactococcus lactis Csm CTR_3:2 CRISPR-Cas Complex
Descriptor: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
Authors:Rai, J, Sridhara, S, Li, H.
Deposit date:2020-07-02
Release date:2022-01-12
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN5
DownloadVisualize
BU of 6xn5 by Molmil
Structure of the Lactococcus lactis Csm Apo- CRISPR-Cas Complex
Descriptor: CRISPR-associated protein Cas10, CRISPR-associated protein Csm3, CRISPR-associated protein Csm4, ...
Authors:Rai, J, Sridhara, S, Li, H.
Deposit date:2020-07-02
Release date:2022-01-12
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN3
DownloadVisualize
BU of 6xn3 by Molmil
Structure of the Lactococcus lactis Csm CTR_4:3 CRISPR-Cas Complex
Descriptor: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
Authors:Rai, J, Sridhara, S, Li, H.
Deposit date:2020-07-02
Release date:2022-01-12
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
6XN7
DownloadVisualize
BU of 6xn7 by Molmil
Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex
Descriptor: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ...
Authors:Rai, J, Sridhara, S, Li, H.
Deposit date:2020-07-02
Release date:2022-01-12
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex.
Commun Biol, 5, 2022
8SEJ
DownloadVisualize
BU of 8sej by Molmil
Type I beta-amyloid 42 Filaments from Down syndrome
Descriptor: Amyloid-beta protein 42
Authors:Hoq, M.R, Bharath, S.R, Vago, F.S, Jiang, W.
Deposit date:2023-04-10
Release date:2024-04-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
8SEH
DownloadVisualize
BU of 8seh by Molmil
PHF Tau from Down Syndrome
Descriptor: Microtubule-associated protein tau
Authors:Hoq, M.R, Bharath, S.R, Jiang, W, Vago, F.S.
Deposit date:2023-04-10
Release date:2024-04-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
8SEK
DownloadVisualize
BU of 8sek by Molmil
Type IIIa beta-amyloid 40 Filaments from Down syndrome
Descriptor: Type IIIb beta-amyloid 40 Filament
Authors:Hoq, M.R, Vago, F.S, Bharath, S.R, Jiang, W.
Deposit date:2023-04-10
Release date:2024-04-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of amyloid-beta and tau filaments in Down syndrome.
Nat.Struct.Mol.Biol., 31, 2024
1A0F
DownloadVisualize
BU of 1a0f by Molmil
CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM ESCHERICHIA COLI COMPLEXED WITH GLUTATHIONESULFONIC ACID
Descriptor: GLUTATHIONE S-TRANSFERASE, GLUTATHIONE SULFONIC ACID
Authors:Nishida, M, Harada, S, Noguchi, S, Inoue, H, Takahashi, K, Satow, Y.
Deposit date:1997-11-29
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of Escherichia coli glutathione S-transferase complexed with glutathione sulfonate: catalytic roles of Cys10 and His106.
J.Mol.Biol., 281, 1998
1C7K
DownloadVisualize
BU of 1c7k by Molmil
CRYSTAL STRUCTURE OF THE ZINC PROTEASE
Descriptor: CALCIUM ION, ZINC ENDOPROTEASE, ZINC ION
Authors:Kurisu, G, Harada, S, Kai, Y.
Deposit date:2000-02-19
Release date:2001-04-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure of the zinc-binding site in the crystal structure of a zinc endoprotease from Streptomyces caespitosus at 1 A resolution.
J.Inorg.Biochem., 82, 2000
7XOH
DownloadVisualize
BU of 7xoh by Molmil
Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative cystathionine beta-synthase Rv1077
Authors:Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
Deposit date:2022-05-01
Release date:2022-05-25
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022
7XOY
DownloadVisualize
BU of 7xoy by Molmil
Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine and serine.
Descriptor: Putative cystathionine beta-synthase Rv1077, [3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE
Authors:Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
Deposit date:2022-05-01
Release date:2022-05-25
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022
8F9K
DownloadVisualize
BU of 8f9k by Molmil
TMEM106B doublet filaments extracted from MSTD neurodegenerative human brain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Transmembrane protein 106B
Authors:Hoq, M.R, Bharath, S.R, Jiang, W.
Deposit date:2022-11-23
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cross-beta helical filaments of Tau and TMEM106B in gray and white matter of multiple system tauopathy with presenile dementia.
Acta Neuropathol, 145, 2023
1BQR
DownloadVisualize
BU of 1bqr by Molmil
REDUCED PSEUDOAZURIN
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Inoue, T, Nishio, N, Hamanaka, S, Shimomura, T, Harada, S, Suzuki, S, Kohzuma, T, Shidara, S, Iwasaki, H, Kai, Y.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine.
J.Biol.Chem., 274, 1999
7JG1
DownloadVisualize
BU of 7jg1 by Molmil
Dimeric Immunoglobin A (dIgA)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
Authors:Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
Deposit date:2020-07-18
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
7JG2
DownloadVisualize
BU of 7jg2 by Molmil
Secretory Immunoglobin A (SIgA)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Igh protein, ...
Authors:Kumar Bharathkar, S, Parker, B.P, Malyutin, A.G, Stadtmueller, B.M.
Deposit date:2020-07-18
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structures of Secretory and dimeric Immunoglobulin A.
Elife, 9, 2020
7WMT
DownloadVisualize
BU of 7wmt by Molmil
Crystal structure of small molecule 13 bound to human Nicotinamide N-methyltransferase
Descriptor: Nicotinamide N-methyltransferase, [(2~{R},4~{S})-4-[2-(aminomethyl)imidazol-1-yl]-2-[1-[(4-chlorophenyl)methyl]-5-methyl-indol-2-yl]pyrrolidin-1-yl]-(1~{H}-pyrrolo[2,3-b]pyridin-5-yl)methanone
Authors:Yoshida, S, Uehara, S, Kondo, N, Takahashi, Y, Yamamoto, S, Kameda, A, Kawagoe, S, Inoue, N, Yamada, M, Yoshimura, N, Tachibana, Y.
Deposit date:2022-01-17
Release date:2022-08-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Peptide-to-Small Molecule: A Pharmacophore-Guided Small Molecule Lead Generation Strategy from High-Affinity Macrocyclic Peptides.
J.Med.Chem., 65, 2022
1BQK
DownloadVisualize
BU of 1bqk by Molmil
OXIDIZED PSEUDOAZURIN
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Inoue, T, Nishio, N, Hamanaka, S, Shimomura, T, Harada, S, Suzuki, S, Kohzuma, T, Shidara, S, Iwasaki, H, Kai, Y.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure determinations of oxidized and reduced pseudoazurins from Achromobacter cycloclastes. Concerted movement of copper site in redox forms with the rearrangement of hydrogen bond at a remote histidine.
J.Biol.Chem., 274, 1999
7XNZ
DownloadVisualize
BU of 7xnz by Molmil
Native cystathionine beta-synthase of Mycobacterium tuberculosis.
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative cystathionine beta-synthase Rv1077
Authors:Bandyopadhyay, P, Pramanick, I, Biswas, R, Sabarinath, P.S, Sreedharan, S, Singh, S, Rajmani, R, Laxman, S, Dutta, S, Singh, A.
Deposit date:2022-04-30
Release date:2022-05-25
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:S-Adenosylmethionine-responsive cystathionine beta-synthase modulates sulfur metabolism and redox balance in Mycobacterium tuberculosis.
Sci Adv, 8, 2022

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon