Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 242 results

4XCS
DownloadVisualize
BU of 4xcs by Molmil
Human peroxiredoxin-1 C83S mutant
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, Peroxiredoxin-1
Authors:Cho, K.J, Lee, J.-H, Khan, T.G, Park, Y, Cho, A, Chang, T.-S, Kim, K.H.
Deposit date:2014-12-18
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Dimeric Human Peroxiredoxin-1 C83S Mutant
Bull.Korean Chem.Soc., 36, 2015
4ROV
DownloadVisualize
BU of 4rov by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
4ROW
DownloadVisualize
BU of 4row by Molmil
The crystal structure of novel APOBEC3G CD2 head-to-tail dimer suggests the binding mode of full-length APOBEC3G to HIV-1 ssDNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Lu, X, Zhang, T, Xu, Z, Liu, S, Zhao, B, Lan, W, Wang, C, Ding, J, Cao, C.
Deposit date:2014-10-29
Release date:2014-12-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of DNA cytidine deaminase ABOBEC3G catalytic deamination domain suggests a binding mode of full-length enzyme to single-stranded DNA
J.Biol.Chem., 290, 2015
4RSN
DownloadVisualize
BU of 4rsn by Molmil
Crystal structure of the E267V mutant of cytochrome P450 BM3
Descriptor: Bifunctional P-450/NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Zhou, W.H, Zhang, A.L, Zhang, T, Ren, X.K, Yorke, J.A, Taylor, A, Wong, L.-L.
Deposit date:2014-11-09
Release date:2015-12-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Expanding the drug metabolism function of P450BM3
To be Published
4RM4
DownloadVisualize
BU of 4rm4 by Molmil
The crystal structure of the versatile cytochrome P450 enzyme CYP109B1 from Bacillus subtilis
Descriptor: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Zhouw, W.H, Zhang, A.L, Zhang, T, Hall, E.A, Hutchinson, S, Cryle, M.J, Wong, L.-L, Bell, S.G.
Deposit date:2014-10-18
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.771 Å)
Cite:The crystal structure of the versatile cytochrome P450 enzyme CYP109B1 from Bacillus subtilis.
Mol Biosyst, 11, 2015
8DHY
DownloadVisualize
BU of 8dhy by Molmil
N-terminal fragment of MsbA fused to GFP in complex with copper(II)
Descriptor: COPPER (II) ION, Fusion protein of MsbA N-terminal fragment and GFP,Green fluorescent protein
Authors:Schrecke, S.R, Zhang, T, Lyu, J, Laganowsky, A.
Deposit date:2022-06-28
Release date:2022-12-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for lipid and copper regulation of the ABC transporter MsbA.
Nat Commun, 13, 2022
8CXH
DownloadVisualize
BU of 8cxh by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: Ankyrin repeat family A protein 2,Envelope E protein, C10 heavy chain, C10 light chain, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
8CXI
DownloadVisualize
BU of 8cxi by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: A11 heavy chain, A11 light chain, Ankyrin repeat family A protein 2,Envelope E protein, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
8CXG
DownloadVisualize
BU of 8cxg by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: Ankyrin repeat family A protein 2,Envelope E protein, C8 scFv heavy chain, C8 scFv light chain, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
6V97
DownloadVisualize
BU of 6v97 by Molmil
Kindlin-3 double deletion mutant short form
Descriptor: Fermitin family homolog 3
Authors:Xu, Z, Zhang, T.L, Xu, Z, Sun, J.J, Ding, J.P, Ma, Y.Q.
Deposit date:2019-12-13
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.381 Å)
Cite:Structure basis of the FERM domain of kindlin-3 in supporting integrin alpha IIb beta 3 activation in platelets.
Blood Adv, 4, 2020
6V9G
DownloadVisualize
BU of 6v9g by Molmil
Kindlin-3 double deletion mutant long form
Descriptor: Fermitin family homolog 3
Authors:Xu, Z, Zhang, T.L, Xu, Z, Sun, J.J, Ding, J.P, Ma, Y.Q.
Deposit date:2019-12-13
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure basis of the FERM domain of kindlin-3 in supporting integrin alpha IIb beta 3 activation in platelets.
Blood Adv, 4, 2020
6KH1
DownloadVisualize
BU of 6kh1 by Molmil
Design and crystal structure of protein MOFs with ferritin nanocages as linkers and nickel clusters as nodes
Descriptor: FE (III) ION, Ferritin, NICKEL (II) ION
Authors:Gu, C, Chen, H, Wang, Y, Zhang, T, Whang, H, Zhao, G.
Deposit date:2019-07-12
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insight into Binary Protein Metal-Organic Frameworks with Ferritin Nanocages as Linkers and Nickel Clusters as Nodes.
Chemistry, 26, 2020
5XUX
DownloadVisualize
BU of 5xux by Molmil
Crystal structure of Rib7 from Methanosarcina mazei
Descriptor: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference.
Biochem. Biophys. Res. Commun., 503, 2018
5J5C
DownloadVisualize
BU of 5j5c by Molmil
Crystal structure of ARL1-GTP and DCB domain of BIG1 complex
Descriptor: ADP-ribosylation factor-like protein 1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wang, R, Wang, Z, Zhang, T, Ding, J.
Deposit date:2016-04-02
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for targeting BIG1 to Golgi apparatus through interaction of its DCB domain with Arl1
J Mol Cell Biol, 2016
5XV5
DownloadVisualize
BU of 5xv5 by Molmil
Crystal structure of Rib7 mutant S88E from Methanosarcina mazei
Descriptor: Conserved protein
Authors:Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference.
Biochem. Biophys. Res. Commun., 503, 2018
5XV0
DownloadVisualize
BU of 5xv0 by Molmil
Crystal structure of Rib7 mutant D33N from Methanosarcina mazei
Descriptor: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference.
Biochem. Biophys. Res. Commun., 503, 2018
5XV2
DownloadVisualize
BU of 5xv2 by Molmil
Crystal structure of Rib7 mutant D33A from Methanosarcina mazei
Descriptor: Conserved protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Yeh, T.M, Chen, S.C, Chang, T.H, Huang, M.F, Liaw, S.H.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of archaeal Rib7 and eubacterial RibG reductases in riboflavin biosynthesis: Substrate specificity and cofactor preference.
Biochem. Biophys. Res. Commun., 503, 2018
4ZA1
DownloadVisualize
BU of 4za1 by Molmil
Crystal Structure of NosA Involved in Nosiheptide Biosynthesis
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, NosA
Authors:Liu, S, Guo, H, Zhang, T, Han, L, Yao, P, Zhang, Y, Rong, N, Yu, Y, Lan, W, Wang, C, Ding, J, Wang, R, Liu, W, Cao, C.
Deposit date:2015-04-13
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based Mechanistic Insights into Terminal Amide Synthase in Nosiheptide-Represented Thiopeptides Biosynthesis
Sci Rep, 5, 2015
5EGM
DownloadVisualize
BU of 5egm by Molmil
Development of a novel tricyclic class of potent and selective FIXa inhibitors
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-chloranyl-~{N}-[(7~{S})-2-methyl-7-phenyl-10-(1~{H}-1,2,3,4-tetrazol-5-yl)-8,9-dihydro-6~{H}-pyrido[1,2-a]indol-7-yl]-4-(1,2,4-triazol-4-yl)benzamide, Coagulation factor IX, ...
Authors:Meng, D, Andre, P, Bateman, T.J, Berger, R, Chen, Y, Desai, K, Dewnani, S, Ellsworth, K, Feng, D, Geissler, W.M, Guo, L, Hruza, A, Jian, T, Li, H, Parker, D.L, Reichert, P, Sherer, E.C, Smith, C.J, Sonatore, L.M, Tschirret-Guth, R, Wu, J, Xu, J, Zhang, T, Campeau, L, Orr, R, Poirier, M, McCabe-Dunn, j, Araki, K, Nishimura, T, Sakurada, I, Hirabayashi, T, Wood, H.B.
Deposit date:2015-10-27
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.841 Å)
Cite:Development of a novel tricyclic class of potent and selective FIXa inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
7V9I
DownloadVisualize
BU of 7v9i by Molmil
The Monomer mutant of BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
8I09
DownloadVisualize
BU of 8i09 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with butyl gallate
Descriptor: CYSTEINE, PHOSPHATE ION, Serine acetyltransferase, ...
Authors:Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
8I06
DownloadVisualize
BU of 8i06 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with CoA
Descriptor: COENZYME A, CYSTEINE, Serine acetyltransferase
Authors:Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
8I04
DownloadVisualize
BU of 8i04 by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with serine
Descriptor: PHOSPHATE ION, SERINE, Serine acetyltransferase
Authors:Toyomoto, T, Ono, K, Shiba, T, Momitani, K, Zhang, T, Tsutsuki, H, Ishikawa, T, Hoso, K, Hamada, K, Rahman, A, Zhong, H, Akaike, T, Yamamoto, K, Matsuoka, M, Hanaoka, K, Niidome, T, Sawa, T.
Deposit date:2023-01-10
Release date:2023-11-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alkyl gallates inhibit serine O -acetyltransferase in bacteria and enhance susceptibility of drug-resistant Gram-negative bacteria to antibiotics.
Front Microbiol, 14, 2023
8WNG
DownloadVisualize
BU of 8wng by Molmil
Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Ile
Descriptor: ACETATE ION, GLYCEROL, ISOLEUCINE, ...
Authors:Guo, Y, Li, S, Zhang, T.
Deposit date:2023-10-05
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for substrate and antibiotic recognition by Helicobacter pylori isoleucyl-tRNA synthetase.
Febs Lett., 598, 2024
8WO3
DownloadVisualize
BU of 8wo3 by Molmil
Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Mupirocin
Descriptor: ACETATE ION, GLYCEROL, Isoleucine--tRNA ligase, ...
Authors:Guo, Y, Li, S, Zhang, T.
Deposit date:2023-10-06
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for substrate and antibiotic recognition by Helicobacter pylori isoleucyl-tRNA synthetase.
Febs Lett., 598, 2024

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon