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PDB: 2026 results

8I3I
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BU of 8i3i by Molmil
Acyl-ACP synthetase structure bound to AMP-PNP in the presence of MgCl2
Descriptor: Acyl-acyl carrier protein synthetase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-17
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Acyl-ACP synthetase structure bound to AMP-PNP in the presence of MgCl2
To Be Published
8HZX
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BU of 8hzx by Molmil
Acyl-ACP synthetase structure-2
Descriptor: Acyl-acyl carrier protein synthetase
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-09
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Acyl-ACP synthetase structure-2
To Be Published
8I49
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BU of 8i49 by Molmil
Acyl-ACP synthetase structure bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acyl-acyl carrier protein synthetase
Authors:Huang, H, Wang, C, Chang, S, Cui, T, Xu, Y, Zhang, H, Zhou, C, Zhang, X, Feng, Y.
Deposit date:2023-01-18
Release date:2024-01-24
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Acyl-ACP synthetase structure bound to ATP.
To Be Published
1Y82
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BU of 1y82 by Molmil
Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus
Descriptor: UNKNOWN ATOM OR ION, hypothetical protein
Authors:Horanyi, P, Tempel, W, Habel, J, Chen, L, Lee, D, Nguyen, D, Chang, S.-H, Florence, Q, Zhou, W, Lin, D, Zhang, H, Praissman, J, Jenney Jr, F.E, Adams, M.W.W, Liu, Z.-J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-12-10
Release date:2005-01-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus
To be published
6QNS
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BU of 6qns by Molmil
Crystal structure of the binding domain of Botulinum Neurotoxin type B mutant I1248W/V1249W in complex with human synaptotagmin 1 and GD1a receptors
Descriptor: Botulinum neurotoxin type B, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Synaptotagmin-1
Authors:Masuyer, G, Yin, L, Zhang, S, Miyashita, S.I, Dong, M, Stenmark, P.
Deposit date:2019-02-12
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a membrane binding loop leads to engineering botulinum neurotoxin B with improved therapeutic efficacy.
Plos Biol., 18, 2020
12E8
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BU of 12e8 by Molmil
2E8 FAB FRAGMENT
Descriptor: IGG1-KAPPA 2E8 FAB (HEAVY CHAIN), IGG1-KAPPA 2E8 FAB (LIGHT CHAIN)
Authors:Rupp, B, Trakhanov, S.
Deposit date:1998-03-14
Release date:1998-08-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a monoclonal 2E8 Fab antibody fragment specific for the low-density lipoprotein-receptor binding region of apolipoprotein E refined at 1.9 A.
Acta Crystallogr.,Sect.D, null, 1999
1AF9
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BU of 1af9 by Molmil
TETANUS NEUROTOXIN C FRAGMENT
Descriptor: TETANUS NEUROTOXIN
Authors:Umland, T.C, Wingert, L, Swaminathan, S, Furey, W.F, Schmidt, J.J, Sax, M.
Deposit date:1997-03-24
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the receptor binding fragment HC of tetanus neurotoxin.
Nat.Struct.Biol., 4, 1997
4V63
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BU of 4v63 by Molmil
Structural basis for translation termination on the 70S ribosome.
Descriptor: 16S RRNA, 23S RRNA, 30S ribosomal protein S10, ...
Authors:Laurberg, M, Asahara, H, Korostelev, A, Zhu, J, Trakhanov, S, Noller, H.F.
Deposit date:2008-05-16
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.207 Å)
Cite:Structural basis for translation termination on the 70S ribosome
Nature, 454, 2008
4V4J
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BU of 4v4j by Molmil
Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.
Descriptor: 16S RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Trakhanov, S, Asahara, H, Laurberg, M, Noller, H.F.
Deposit date:2007-07-18
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.83 Å)
Cite:Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4UBE
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BU of 4ube by Molmil
CRYSTAL STRUCTURE OF M TUBERCULOSIS ADENOSINE KINASE COMPLEXED WITH 2-FLURO ADENOSINE
Descriptor: 2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Adenosine kinase
Authors:Reddy, M.C.M, Palaninathan, S.K, Shetty, N.D, Owen, J.L, Watson, M.D, Sacchettini, J.C.
Deposit date:2014-08-12
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.933 Å)
Cite:CRYSTAL STRUCTURE OF M TUBERCULOSIS ADENOSINE KINASE COMPLEXED WITH 2-FLURO ADENOSINE
TO BE PUBLISHED
1XBA
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BU of 1xba by Molmil
Crystal structure of apo syk tyrosine kinase domain
Descriptor: Tyrosine-protein kinase SYK
Authors:Atwell, S, Adams, J.M, Badger, J, Buchanan, M.D, Feil, I.K, Froning, K.J, Gao, X, Hendle, J, Keegan, K, Leon, B.C, Muller-Deickmann, H.J, Nienaber, V.L, Noland, B.W, Post, K, Rajashankar, K.R, Ramos, A, Russell, M, Burley, S.K, Buchanan, S.G.
Deposit date:2004-08-30
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel mode of Gleevec binding is revealed by the structure of spleen tyrosine kinase.
J.Biol.Chem., 279, 2004
8UNH
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BU of 8unh by Molmil
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Sliding clamp, ...
Authors:Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J.
Deposit date:2023-10-19
Release date:2023-12-13
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM.
Nat.Struct.Mol.Biol., 31, 2024
8UNF
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BU of 8unf by Molmil
Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp and DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sliding clamp, ...
Authors:Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J.
Deposit date:2023-10-18
Release date:2023-12-13
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM.
Nat.Struct.Mol.Biol., 31, 2024
1XHO
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BU of 1xho by Molmil
Chorismate mutase from Clostridium thermocellum Cth-682
Descriptor: Chorismate mutase, UNKNOWN ATOM OR ION
Authors:Xu, H, Chen, L, Lee, D, Habel, J.E, Nguyen, J, Chang, S.-H, Kataeva, I, Chang, J, Zhao, M, Yang, H, Horanyi, P, Florence, Q, Tempel, W, Zhou, W, Lin, D, Zhang, H, Praissman, J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Ljungdahl, L, Liu, Z.-J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-20
Release date:2004-11-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Away from the edge II: in-house Se-SAS phasing with chromium radiation.
Acta Crystallogr.,Sect.D, 61, 2005
3NIV
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BU of 3niv by Molmil
The crystal structure of Glutathione S-transferase from Legionella pneumophila
Descriptor: Glutathione S-transferase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-06-16
Release date:2010-07-14
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of Glutathione S-transferase from Legionella pneumophila
To be Published
1XBB
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BU of 1xbb by Molmil
Crystal structure of the syk tyrosine kinase domain with Gleevec
Descriptor: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, Tyrosine-protein kinase SYK
Authors:Nienaber, V.L, Atwell, S, Adams, J.M, Badger, J, Buchanan, M.D, Feil, I.K, Froning, K.J, Gao, X, Hendle, J, Keegan, K, Leon, B.C, Muller-Deickmann, H.J, Noland, B.W, Post, K, Rajashankar, K.R, Ramos, A, Russell, M, Burley, S.K, Buchanan, S.G.
Deposit date:2004-08-30
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A Novel Mode of Gleevec Binding Is Revealed by the Structure of Spleen Tyrosine Kinase
J.Biol.Chem., 279, 2004
1XBC
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BU of 1xbc by Molmil
Crystal structure of the syk tyrosine kinase domain with Staurosporin
Descriptor: STAUROSPORINE, Tyrosine-protein kinase SYK
Authors:Badger, J, Atwell, S, Adams, J.M, Buchanan, M.D, Feil, I.K, Froning, K.J, Gao, X, Hendle, J, Keegan, K, Leon, B.C, Muller-Deickmann, H.J, Nienaber, V.L, Noland, B.W, Post, K, Rajashankar, K.R, Ramos, A, Russell, M, Burley, S.K, Buchanan, S.G.
Deposit date:2004-08-30
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel mode of Gleevec binding is revealed by the structure of spleen tyrosine kinase
J.Biol.Chem., 279, 2004
3KCN
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BU of 3kcn by Molmil
The crystal structure of adenylate cyclase from Rhodopirellula baltica
Descriptor: Adenylate cyclase homolog
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The crystal structure of adenylate cyclase from Rhodopirellula baltica
To be Published
3KCM
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BU of 3kcm by Molmil
The crystal structure of thioredoxin protein from Geobacter metallireducens
Descriptor: SULFATE ION, Thioredoxin family protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-21
Release date:2009-11-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The crystal structure of thioredoxin protein from Geobacter metallireducens
To be Published
3KXW
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BU of 3kxw by Molmil
The crystal structure of fatty acid AMP ligase from Legionella pneumophila
Descriptor: 5'-O-[(S)-(dodecanoyloxy)(hydroxy)phosphoryl]adenosine, Saframycin Mx1 synthetase B
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-04
Release date:2010-03-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural and Functional Studies of Fatty Acyl Adenylate Ligases from E. coli and L. pneumophila.
J.Mol.Biol., 406, 2011
3H5O
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BU of 3h5o by Molmil
The crystal structure of transcription regulator GntR from Chromobacterium violaceum
Descriptor: SULFATE ION, Transcriptional regulator GntR
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-04-22
Release date:2009-05-05
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of transcription regulator GntR from Chromobacterium violaceum
To be Published
3LNV
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BU of 3lnv by Molmil
The crystal structure of fatty acyl-adenylate ligase from L. pneumophila in complex with acyl adenylate and pyrophosphate
Descriptor: 5'-O-[(S)-(dodecanoyloxy)(hydroxy)phosphoryl]adenosine, PYROPHOSPHATE 2-, Saframycin Mx1 synthetase B
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-03
Release date:2010-04-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Studies of Fatty Acyl Adenylate Ligases from E. coli and L. pneumophila.
J.Mol.Biol., 406, 2011
3LL3
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BU of 3ll3 by Molmil
The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus
Descriptor: 1-DEOXY-D-XYLULOSE-5-PHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-28
Release date:2010-03-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The crystal structure of xylulose kinase from Lactobacillus acidophilus
To be Published
3HDC
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BU of 3hdc by Molmil
The crystal structure of thioredoxin protein from Geobacter metallireducens
Descriptor: Thioredoxin family protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-07
Release date:2009-05-26
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.771 Å)
Cite:The crystal structure of thioredoxin protein from Geobacter metallireducens
To be Published
3DZB
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BU of 3dzb by Molmil
Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
Descriptor: Prephenate dehydrogenase
Authors:Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
To be Published

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