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PDB: 2049 results

8HJN
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Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UPG
Descriptor: URIDINE-5'-DIPHOSPHATE-GLUCOSE, glycosyltransferase
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides.
Nat Commun, 15, 2024
8HJO
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Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, URIDINE-5'-DIPHOSPHATE, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides.
Nat Commun, 15, 2024
8HJL
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Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M3E
Descriptor: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(3S,8S,9R,10S,11S,13R,14S,17S)-17-[(2S,5R)-5-[(2S,3R,4S,5R,6S)-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-methyl-6-oxidanyl-heptan-2-yl]-4,4,9,13,14-pentamethyl-11-oxidanyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-3,4,5-triol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Li, M, Zhang, S, Cui, S.
Deposit date:2022-11-23
Release date:2024-05-29
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural insights into the catalytic selectivity of glycosyltransferase SgUGT94-289-3 towards mogrosides.
Nat Commun, 15, 2024
3IQ0
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BU of 3iq0 by Molmil
Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, putative Ribokinase II
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-18
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a putative Ribokinase (II)in complex with ATP and Mg+2 from E.coli
To be Published
1XI6
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Extragenic suppressor from Pyrococcus furiosus Pfu-1862794-001
Descriptor: extragenic suppressor
Authors:Zhao, M, Chang, J.C, Zhou, W, Chen, L, Horanyi, P, Xu, H, Yang, H, Liu, Z.-J, Habel, J.E, Lee, D, Chang, S.-H, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-21
Release date:2004-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Extragenic suppressor from Pyrococcus furiosus Pfu-1862794-001
To be published
3N3I
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BU of 3n3i by Molmil
Crystal Structure of G48V/C95F tethered HIV-1 Protease/Saquinavir complex
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, Protease
Authors:Prashar, V, Bihani, S.C, Das, A, Rao, D.R, Hosur, M.V.
Deposit date:2010-05-20
Release date:2010-06-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Insights into the mechanism of drug resistance: X-ray structure analysis of G48V/C95F tethered HIV-1 protease dimer/saquinavir complex
Biochem.Biophys.Res.Commun., 396, 2010
4ZCF
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Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, DNA 20-mer AATCATAGTCTACTGCTGTA, ...
Authors:Gupta, Y.K, Chan, S.H, Xu, S.Y, Aggarwal, A.K.
Deposit date:2015-04-15
Release date:2015-07-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I.
Nat Commun, 6, 2015
1XI8
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Molybdenum cofactor biosynthesis protein from Pyrococcus furiosus Pfu-1657500-001
Descriptor: Molybdenum cofactor biosynthesis protein
Authors:Zhou, W, Zhao, M, Chang, J.C, Liu, Z.-J, Chen, L, Horanyi, P, Xu, H, Yang, H, Habel, J.E, Lee, D, Chang, S.-H, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-21
Release date:2004-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Molybdenum cofactor biosynthesis protein from Pyrococcus furiosus Pfu-1657500-001
To be published
6N8B
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BU of 6n8b by Molmil
Crystal structure of transcription regulator AcaB from uropathogenic E. coli
Descriptor: CALCIUM ION, transcription regulator AcaB
Authors:Luo, Z, Hancock, S.J, Schembri, M.A, Kobe, B.
Deposit date:2018-11-29
Release date:2020-07-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB.
Nat Microbiol, 5, 2020
4ZKT
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Crystal structure of the progenitor M complex of Clostridium botulinum type E neurotoxin
Descriptor: Bontoxilysin A, Botulinum neurotoxin type E, nontoxic-nonhemagglutinin component, ...
Authors:Eswaramoorthy, S, Swaminathan, S.
Deposit date:2015-04-30
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Molecular Assembly of Clostridium botulinum progenitor M complex of type E.
Sci Rep, 5, 2015
1CCD
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BU of 1ccd by Molmil
REFINED STRUCTURE OF RAT CLARA CELL 17 KDA PROTEIN AT 3.0 ANGSTROMS RESOLUTION
Descriptor: CLARA CELL 17 kD PROTEIN, SULFATE ION
Authors:Umland, T.C, Swaminathan, S, Furey, W, Singh, G, Pletcher, J, Sax, M.
Deposit date:1991-09-17
Release date:1994-01-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Refined structure of rat Clara cell 17 kDa protein at 3.0 A resolution.
J.Mol.Biol., 224, 1992
3N76
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BU of 3n76 by Molmil
Crystal structure of 3-dehydroquinate dehydratase from Mycobacterium tuberculosis in complex with compound 5
Descriptor: (1S,3R,4R,5S)-1,3,4-TRIHYDROXY-5-(3-PHENOXYPROPYL)CYCLOHEXANECARBOXYLIC ACID, 3-dehydroquinate dehydratase
Authors:Dias, M.V.B, Snee, W.C, Bromfield, K.M, Payne, R, Palaninathan, S.K, Ciulli, A, Howard, N.I, Abell, C, Sacchettini, J.C, Blundell, T.L.
Deposit date:2010-05-26
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural investigation of inhibitor designs targeting 3-dehydroquinate dehydratase from the shikimate pathway of Mycobacterium tuberculosis.
Biochem.J., 436, 2011
6G4A
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BU of 6g4a by Molmil
FLN5 (full length)
Descriptor: Gelation factor
Authors:Waudby, C.A, Wlodarski, T, Karyadi, M.-E, Cassaignau, A.M.E, Chan, S.H.S, Wentink, A.S, Schmidt-Engler, J.M, Camilloni, C, Vendruscolo, M, Cabrita, L.D, Christodoulou, J.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping energy landscapes of a growing filamin domain reveals an intermediate associated with proline isomerization during biosynthesis
To Be Published
5DA3
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BU of 5da3 by Molmil
Crystal structure of PTK6 Kinase domain with inhibitor
Descriptor: (2-chloro-4-{[6-cyclopropyl-3-(1H-pyrazol-4-yl)imidazo[1,2-a]pyrazin-8-yl]amino}phenyl)(morpholin-4-yl)methanone, GLYCEROL, Protein-tyrosine kinase 6
Authors:Thakur, M.K, Birudukota, S, Swaminathan, S, Battula, S.K, Vadivelu, S, Tyagi, R, Gosu, R.
Deposit date:2015-08-19
Release date:2016-08-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Co-crystal structures of PTK6: With Dasatinib at 2.24 angstrom , with novel imidazo[1,2-a]pyrazin-8-amine derivative inhibitor at 1.70 angstrom resolution
Biochem. Biophys. Res. Commun., 482, 2017
7NQA
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BU of 7nqa by Molmil
Crystal structure of Nucleoporin-98 nanobody MS98-6 complex solved at 2.2A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-Nup98 Nanobody MS98-6, Nuclear pore complex protein Nup98-Nup96, ...
Authors:Sola-Colom, M, Trakhanov, S, Goerlich, D.
Deposit date:2021-03-01
Release date:2021-07-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies.
Embo J., 2024
8I2H
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BU of 8i2h by Molmil
Follicle stimulating hormone receptor
Descriptor: Follicle-stimulating hormone receptor
Authors:Duan, J, Xu, P, Yang, J, Ji, Y, Zhang, H, Mao, C, Luan, X, Jiang, Y, Zhang, Y, Zhang, S, Xu, H.E.
Deposit date:2023-01-14
Release date:2023-03-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Mechanism of hormone and allosteric agonist mediated activation of follicle stimulating hormone receptor.
Nat Commun, 14, 2023
6BY7
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BU of 6by7 by Molmil
Folding DNA into a lipid-conjugated nano-barrel for controlled reconstitution of membrane proteins
Descriptor: DNA (26-MER), DNA (27-MER), DNA (29-MER), ...
Authors:Dong, Y, Chen, S, Zhang, S, Sodroski, J, Yang, Z, Liu, D, Mao, Y.
Deposit date:2017-12-20
Release date:2018-02-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Folding DNA into a Lipid-Conjugated Nanobarrel for Controlled Reconstitution of Membrane Proteins.
Angew. Chem. Int. Ed. Engl., 57, 2018
12E8
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BU of 12e8 by Molmil
2E8 FAB FRAGMENT
Descriptor: IGG1-KAPPA 2E8 FAB (HEAVY CHAIN), IGG1-KAPPA 2E8 FAB (LIGHT CHAIN)
Authors:Rupp, B, Trakhanov, S.
Deposit date:1998-03-14
Release date:1998-08-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a monoclonal 2E8 Fab antibody fragment specific for the low-density lipoprotein-receptor binding region of apolipoprotein E refined at 1.9 A.
Acta Crystallogr.,Sect.D, null, 1999
8ILB
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BU of 8ilb by Molmil
The complexes of RbcL, AtRaf1 and AtBSD2 (LFB)
Descriptor: Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, Ribulose bisphosphate carboxylase large chain, ...
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-03
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IO2
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BU of 8io2 by Molmil
The Rubisco assembly intermidate of Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1) and Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-10
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IOJ
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BU of 8ioj by Molmil
The Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IOL
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BU of 8iol by Molmil
The complex of Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
1ZD0
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BU of 1zd0 by Molmil
Crystal structure of Pfu-542154 conserved hypothetical protein
Descriptor: MAGNESIUM ION, METHANOL, UNKNOWN ATOM OR ION, ...
Authors:Habel, J.E, Liu, Z.J, Horanyi, P.S, Florence, Q.J.T, Tempel, W, Zhou, W, Chen, L, Lee, D, Nguyen, J, Chang, S.H, Bereton, P, Izumi, M, Jenny Jr, F.E, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2005-04-13
Release date:2005-05-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Pfu-542154 conserved hypothetical protein
To be Published
3HP0
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BU of 3hp0 by Molmil
Crystal structure of a Putative polyketide biosynthesis enoyl-CoA hydratase (pksH) from Bacillus subtilis
Descriptor: Putative polyketide biosynthesis enoyl-CoA hydratase homolog pksH
Authors:Satyanarayana, L, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-03
Release date:2009-06-23
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of a Putative polyketide biosynthesis enoyl-CoA hydratase (pksH) from Bacillus subtilis
To be Published
3JUL
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BU of 3jul by Molmil
Crystal structure of Listeria innocua D-Tagatose-6-Phosphate Kinase bound with substrate
Descriptor: 6-O-phosphono-beta-D-tagatofuranose, Lin2199 protein, MAGNESIUM ION
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-15
Release date:2009-10-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Listeria innocua D-Tagatose-6-Phosphate Kinase bound with substrate
To be Published

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