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PDB: 460 件

7LKI
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The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8
分子名称: Epitope III peptide GLY-ALA-PRO-THR-TYR-SER-TRP-GLY, antibody 1H8 heavy chain, antibody 1H8 light chain
著者Deng, L, Zhang, P.
登録日2021-02-02
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A conserved epitope III on hepatitis C virus E2 protein has alternate conformations facilitating cell binding or virus neutralization.
Proc.Natl.Acad.Sci.USA, 118, 2021
8Q71
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Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the inhibitor GC-67
分子名称: (2~{S})-1-(3,4-dichlorophenyl)-4-(4-methoxypyridin-3-yl)carbonyl-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide, 3C-like proteinase nsp5
著者Strater, N, Muller, C.E, Sylvester, K, Weisse, R.H, Useini, A, Gao, S, Song, L, Liu, Z, Zhan, P.
登録日2023-08-15
公開日2023-12-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.322 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Trisubstituted Piperazine Derivatives as Noncovalent Severe Acute Respiratory Syndrome Coronavirus 2 Main Protease Inhibitors with Improved Antiviral Activity and Favorable Druggability.
J.Med.Chem., 66, 2023
7X0Y
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Cryo-EM Structure of Arabidopsis CRY2 tetramer in complex with CIB1 fragment
分子名称: CIB1 fragment, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
著者Hao, Y.H, Zhang, X, Zhang, P.
登録日2022-02-22
公開日2023-01-04
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling.
Plant Commun., 4, 2023
7X0X
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Cryo-EM Structure of Arabidopsis CRY2 in active conformation
分子名称: Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
著者Hao, Y.H, Zhang, X, Zhang, P.
登録日2022-02-22
公開日2023-01-04
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Cryo-EM structure of the CRY2 and CIB1 fragment complex provides insights into CIB1-mediated photosignaling.
Plant Commun., 4, 2023
6CAJ
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens
分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
著者Tsai, J.C, Miller-Vedam, L.E, Anand, A.A, Jaishankar, P, Nguyen, H.C, Renslo, A.R, Frost, A, Walter, P.
登録日2018-01-31
公開日2018-04-11
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the nucleotide exchange factor eIF2B reveals mechanism of memory-enhancing molecule.
Science, 359, 2018
7FHR
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Crystal Structure of a Rieske Oxygenase from Cupriavidus metallidurans
分子名称: 1,2-ETHANEDIOL, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Mahto, J.K, Dhankhar, P, Kumar, P.
登録日2021-07-30
公開日2021-12-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.
J.Biol.Chem., 297, 2021
3P4F
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Structural and biochemical insights into MLL1 core complex assembly and regulation.
分子名称: Histone-lysine N-methyltransferase MLL, Retinoblastoma-binding protein 5, WD repeat-containing protein 5
著者Avdic, V, Zhang, P, Lanouette, S, Groulx, A, Tremblay, V, Brunzelle, J.B, Couture, J.-F.
登録日2010-10-06
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and biochemical insights into MLL1 core complex assembly.
Structure, 19, 2011
3NFI
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Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DNA-directed RNA polymerase I subunit RPA49
著者Geiger, S.R, Lorenzen, K, Schreieck, A, Hanecker, P, Kostrewa, D, Heck, A.J.R, Cramer, P.
登録日2010-06-10
公開日2010-09-08
最終更新日2015-03-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex.
Mol.Cell, 39, 2010
1K46
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Crystal Structure of the Type III Secretory Domain of Yersinia YopH Reveals a Domain-Swapped Dimer
分子名称: PROTEIN-TYROSINE PHOSPHATASE YOPH
著者Smith, C.L, Khandelwal, P, Keliikuli, K, Zuiderweg, E.R.P, Saper, M.A.
登録日2001-10-05
公開日2001-11-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the type III secretion and substrate-binding domain of Yersinia YopH phosphatase.
Mol.Microbiol., 42, 2001
2QTX
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Crystal structure of an Hfq-like protein from Methanococcus jannaschii
分子名称: Uncharacterized protein MJ1435
著者Nielsen, J.S, Boggild, A, Andersen, C.B.F, Nielsen, G, Boysen, A, Brodersen, D.E, Valentin-Hansen, P.
登録日2007-08-03
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An Hfq-like protein in archaea: Crystal structure and functional characterization of the Sm protein from Methanococcus jannaschii.
Rna, 13, 2007
1LO6
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Human Kallikrein 6 (hK6) active form with benzamidine inhibitor at 1.56 A resolution
分子名称: BENZAMIDINE, Kallikrein 6, MAGNESIUM ION
著者Bernett, M.J, Blaber, S.I, Scarisbrick, I.A, Dhanarajan, P, Thompson, S.M, Blaber, M.
登録日2002-05-06
公開日2002-05-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal structure and biochemical characterization of human kallikrein 6 reveals a trypsin-like kallikrein is expressed in the central nervous system
To be Published
3NFH
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Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49 (P4)
分子名称: DNA-directed RNA polymerase I subunit RPA49
著者Geiger, S.R, Lorenzen, K, Schreieck, A, Hanecker, P, Kostrewa, D, Heck, A.J.R, Cramer, P.
登録日2010-06-10
公開日2010-09-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex.
Mol.Cell, 39, 2010
7YZY
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pMMO structure from native membranes by cryoET and STA
分子名称: Methane monooxygenase subunit C2, Particulate methane monooxygenase alpha subunit, Particulate methane monooxygenase beta subunit
著者Zhu, Y, Ni, T, Zhang, P.
登録日2022-02-21
公開日2022-08-10
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure and activity of particulate methane monooxygenase arrays in methanotrophs.
Nat Commun, 13, 2022
7ZC1
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Subtomogram averaging of Rubisco from Cyanobium carboxysome
分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase, small subunit
著者Ni, T, Zhu, Y, Seaton-Burn, W, Zhang, P.
登録日2022-03-25
公開日2022-07-06
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
1XRT
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BU of 1xrt by Molmil
The Crystal Structure of a Novel, Latent Dihydroorotase from Aquifex Aeolicus at 1.7 A Resolution
分子名称: Dihydroorotase, ZINC ION
著者Martin, P.D, Purcarea, C, Zhang, P, Vaishnav, A, Sadecki, S, Guy-Evans, H.I, Evans, D.R, Edwards, B.F.
登録日2004-10-15
公開日2005-07-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.609 Å)
主引用文献The crystal structure of a novel, latent dihydroorotase from Aquifex aeolicus at 1.7A resolution
J.Mol.Biol., 348, 2005
7L7G
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Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens (updated model of PDB ID: 6CAJ)
分子名称: 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy)ethanoylamino]cyclohexyl]ethanamide, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
著者Tsai, J.C, Miller-Vedam, L.E, Anand, A, Jaishankar, P, Nguyen, H.C, Wang, L, Renslo, A.R, Frost, A, Walter, P.
登録日2020-12-28
公開日2021-03-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献eIF2B conformation and assembly state regulates the integrated stress response.
Elife, 10, 2021
1RZ4
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Crystal Structure of Human eIF3k
分子名称: Eukaryotic translation initiation factor 3 subunit 11, SULFATE ION
著者Wei, Z, Zhang, P, Zhou, Z, Gong, W.
登録日2003-12-23
公開日2004-09-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human eIF3k, the first structure of eIF3 subunits
J.Biol.Chem., 279, 2004
8A1S
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Structure of murine perforin-2 (Mpeg1) pore in twisted form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
著者Yu, X, Ni, T, Zhang, P, Gilbert, R.
登録日2022-06-02
公開日2022-07-20
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
8A1D
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Structure of murine perforin-2 (Mpeg1) pore in ring form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, Macrophage-expressed gene 1 protein
著者Yu, X, Ni, T, Zhang, P, Gilbert, R.
登録日2022-06-01
公開日2022-07-20
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
1NON
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PyrR, the regulator of the pyrimidine biosynthetic operon in Bacillus caldolyticus
分子名称: PyrR bifunctional protein
著者Switzer, R.L, Chander, P, Smith, J.L, Halbig, K.M, Miller, J.K, Bonner, H.K, Grabner, G.K.
登録日2003-01-16
公開日2004-05-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides
J.Bacteriol., 187, 2005
3HJT
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Structure of laminin binding protein (Lmb) of Streptococcus agalactiae A bifunctional protein with adhesin and metal transporting activity
分子名称: Lmb, ZINC ION
著者Ponnuraj, K, Ragunathan, P, Spellerberg, B.
登録日2009-05-22
公開日2009-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of laminin-binding adhesin (Lmb) from Streptococcus agalactiae
Acta Crystallogr.,Sect.D, 65, 2009
4HZL
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Neutralizing antibody mAb#8 in complex with the Epitope II of HCV E2 envelope protein
分子名称: E2 envelop protein, Fab heavy chain, Fab light chain
著者Deng, L, Zhang, P.
登録日2012-11-15
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural evidence for a bifurcated mode of action in the antibody-mediated neutralization of hepatitis C virus.
Proc.Natl.Acad.Sci.USA, 110, 2013
5YIO
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NMR solution structure of subunit epsilon of the Mycobacterium tuberculosis F-ATP synthase
分子名称: ATP synthase epsilon chain
著者Shin, J, Ragunathan, P, Sundararaman, L, Nartey, W, Manimekalai, M.S.S, Bogdanovic, N, Gruber, G.
登録日2017-10-06
公開日2018-10-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR solution structure of Mycobacterium tuberculosis F-ATP synthase subunit epsilon provides new insight into energy coupling inside the rotary engine.
FEBS J., 285, 2018
1EDM
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EPIDERMAL GROWTH FACTOR-LIKE DOMAIN FROM HUMAN FACTOR IX
分子名称: CALCIUM ION, FACTOR IX
著者Rao, Z, Handford, P, Mayhew, M, Knott, V, Brownlee, G.G, Stuart, D.
登録日1996-03-21
公開日1996-10-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of a Ca(2+)-binding epidermal growth factor-like domain: its role in protein-protein interactions.
Cell(Cambridge,Mass.), 82, 1995
1TUX
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HIGH RESOLUTION CRYSTAL STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS
分子名称: XYLANASE
著者Natesh, R, Bhanumoorthy, P, Vithayathil, P.J, Sekar, K, Ramakumar, S, Viswamitra, M.A.
登録日1998-10-29
公開日1999-07-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure at 1.8 A resolution and proposed amino acid sequence of a thermostable xylanase from Thermoascus aurantiacus.
J.Mol.Biol., 288, 1999

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