Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 247 results

3TZ3
DownloadVisualize
BU of 3tz3 by Molmil
Crystal Structure of the humanized carboxyltransferase domain of yeast Acetyl-coA caroxylase in complex with compound 2
Descriptor: 6-{[1-(anthracen-9-ylcarbonyl)piperidin-4-yl]methyl}-2-methylquinoline, Acetyl-CoA carboxylase
Authors:Rajamohan, F, Marr, E, Reyes, A, Landro, J.A, Anderson, M.D, Corbett, J.W, Dirico, K.J, Harwood, J.H, Tu, M, Vajdos, F.F.
Deposit date:2011-09-26
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-guided Inhibitor Design for Human Acetyl-coenzyme A Carboxylase by Interspecies Active Site Conversion.
J.Biol.Chem., 286, 2011
3TVW
DownloadVisualize
BU of 3tvw by Molmil
Crystal Structure of the humanized carboxyltransferase domain of yeast Acetyl-coA caroxylase in complex with compound 4
Descriptor: Acetyl-CoA carboxylase, [4-(2H-chromen-3-ylmethyl)piperazin-1-yl]-[3-(1H-pyrazol-5-yl)phenyl]methanone
Authors:Rajamohan, F, Marr, E, Reyes, A, Landro, J.A, Anderson, M.D, Corbett, J.W, Dirico, K.J, Harwood, J.H, Tu, M, Vajdos, F.F.
Deposit date:2011-09-20
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-guided Inhibitor Design for Human Acetyl-coenzyme A Carboxylase by Interspecies Active Site Conversion.
J.Biol.Chem., 286, 2011
4O5Y
DownloadVisualize
BU of 4o5y by Molmil
O6-carboxymethylguanine in DNA forms a sequence context dependent wobble base pair structure with thymine
Descriptor: BARIUM ION, DNA (5'-D(*CP*GP*CP*(C6G)P*AP*AP*TP*TP*TP*GP*CP*G)-3'), POTASSIUM ION
Authors:Zhang, F, Tsunoda, M, Suzuki, K, Kikuchi, Y, Wilkinson, O, Millington, C.L, Margison, G.P, Williams, D.M, Takenaka, A.
Deposit date:2013-12-20
Release date:2014-07-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:O(6)-Carboxymethylguanine in DNA forms a sequence context-dependent wobble base-pair structure with thymine
Acta Crystallogr.,Sect.D, 70, 2014
4O5X
DownloadVisualize
BU of 4o5x by Molmil
O6-carboxymethylguanine in DNA forms a sequence context dependent wobble base pair structure with thymine.
Descriptor: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*(C6G)P*AP*AP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Zhang, F, Tsunoda, M, Suzuki, K, Kikuchi, Y, Wilkinson, O, Millington, C.L, Margison, G.P, Williams, D.M, Takenaka, A.
Deposit date:2013-12-20
Release date:2014-07-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:O(6)-Carboxymethylguanine in DNA forms a sequence context-dependent wobble base-pair structure with thymine
Acta Crystallogr.,Sect.D, 70, 2014
4M1P
DownloadVisualize
BU of 4m1p by Molmil
Crystal structure of the copper-sensing repressor CsoR with Cu(I) from Geobacillus thermodenitrificans NG80-2
Descriptor: COPPER (I) ION, Copper-sensitive operon repressor (CsoR), SODIUM ION
Authors:Chang, F, Dann III, C.E, Giedroc, D.P.
Deposit date:2013-08-03
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.564 Å)
Cite:Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR).
J.Biol.Chem., 289, 2014
8T2I
DownloadVisualize
BU of 8t2i by Molmil
Negative stain EM assembly of MYC, JAZ, and NINJA complex
Descriptor: AFP homolog 2, Maltose/maltodextrin-binding periplasmic protein, Protein TIFY 10A, ...
Authors:Zhou, X.E, Zhang, Y, Zhou, Y, He, Q, Cao, X, Kariapper, L, Suino-Powell, K, Zhu, Y, Zhang, F, Karsten, M.
Deposit date:2023-06-06
Release date:2023-06-28
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (10.4 Å)
Cite:Assembly of JAZ-JAZ and JAZ-NINJA complexes in jasmonate signaling.
Plant Commun., 4, 2023
2Y5C
DownloadVisualize
BU of 2y5c by Molmil
Structure of human ferredoxin 2 (Fdx2)in complex with 2Fe2S cluster
Descriptor: ADRENODOXIN-LIKE PROTEIN, MITOCHONDRIAL, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Webert, H, Hobler, A, Sheftel, A.D, Molik, S, Maestre-Reyna, M, Essen, L.-O, Vorniscescu, D, Keusgen, M, Hannemann, F, Bernhardt, R, Lill, R.
Deposit date:2011-01-12
Release date:2012-02-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Functional Studies on Human Mitochondrial Ferredoxins
To be Published
5KCM
DownloadVisualize
BU of 5kcm by Molmil
Crystal structure of iron-sulfur cluster containing photolyase PhrB mutant I51W
Descriptor: (6-4) photolyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Yang, X, Bowatte, K, Zhang, F, Lamparter, T.
Deposit date:2016-06-06
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.149 Å)
Cite:Crystal Structures of Bacterial (6-4) Photolyase Mutants with Impaired DNA Repair Activity.
Photochem. Photobiol., 93, 2017
5DEJ
DownloadVisualize
BU of 5dej by Molmil
Transthyretin natural mutant A19D
Descriptor: CALCIUM ION, Transthyretin
Authors:Pereira, H.M, Ferreira, P, Andrade, C, Lima, C, Palhano, F, Foguel, D.
Deposit date:2015-08-25
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of human Transthyretin natural mutant A19D
To Be Published
8EEX
DownloadVisualize
BU of 8eex by Molmil
Cas7-11 in complex with Csx29
Descriptor: Cas7-11, Csx29, ZINC ION, ...
Authors:Demircioglu, F.E, Wilkinson, M.E, Strecker, J, Li, D, Faure, G, Macrae, R.K, Zhang, F.
Deposit date:2022-09-07
Release date:2022-11-16
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:RNA-activated protein cleavage with a CRISPR-associated endopeptidase.
Science, 378, 2022
8EEY
DownloadVisualize
BU of 8eey by Molmil
Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30
Descriptor: Cas7-11, Csx29, Csx30, ...
Authors:Demircioglu, F.E, Wilkinson, M.E, Strecker, J, Li, D, Faure, G, Macrae, R.K, Zhang, F.
Deposit date:2022-09-07
Release date:2022-11-16
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:RNA-activated protein cleavage with a CRISPR-associated endopeptidase.
Science, 378, 2022
6KZW
DownloadVisualize
BU of 6kzw by Molmil
Crystal structure of YggS family pyridoxal phosphate-dependent enzyme PipY from Fusobacterium nucleatum
Descriptor: PHOSPHATE ION, Pyridoxal phosphate homeostasis protein
Authors:Chen, Y, Wang, L, Shang, F, Lan, J, Liu, W, Xu, Y.
Deposit date:2019-09-25
Release date:2019-10-16
Last modified:2021-01-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of YggS family pyridoxal phosphate-dependent enzyme PipY from Fusobacterium nucleatum
To Be Published
6L3E
DownloadVisualize
BU of 6l3e by Molmil
Crystal structure of Salmonella enterica sugar-binding protein MalE
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, ...
Authors:Wang, L, Chen, Y, Liu, W, Lan, J, Shang, F, Xu, Y.
Deposit date:2019-10-10
Release date:2019-10-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of Salmonella enterica sugar-binding protein MalE
To Be Published
6DKL
DownloadVisualize
BU of 6dkl by Molmil
Crystal Structure of a Rationally Designed Six-Fold Symmetric DNA Scaffold
Descriptor: DNA (5'-D(P*CP*AP*CP*AP*CP*CP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*GP*AP*TP*GP*CP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*AP*CP*GP*GP*AP*TP*CP*CP*AP*G)-3'), ...
Authors:Simmons, C.R, Zhang, F, Yan, H.
Deposit date:2018-05-29
Release date:2018-08-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.034 Å)
Cite:Self-Assembly of a 3D DNA Crystal Structure with Rationally Designed Six-Fold Symmetry.
Angew. Chem. Int. Ed. Engl., 57, 2018
6LBP
DownloadVisualize
BU of 6lbp by Molmil
Structure of the Glutamine Phosphoribosylpyrophosphate Amidotransferase from Arabidopsis thaliana
Descriptor: Amidophosphoribosyltransferase 2, chloroplastic, IRON/SULFUR CLUSTER
Authors:Yi, Z, Cao, X, Han, F, Feng, Y.
Deposit date:2019-11-14
Release date:2020-04-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.065 Å)
Cite:Crystal Structure of the Chloroplastic Glutamine Phosphoribosylpyrophosphate Amidotransferase GPRAT2 FromArabidopsis thaliana.
Front Plant Sci, 11, 2020
6LK0
DownloadVisualize
BU of 6lk0 by Molmil
Crystal structure of human wild type TRIP13
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Wang, Y, Huang, J, Li, B, Xue, H, Tricot, G, Hu, L, Xu, Z, Sun, X, Chang, S, Gao, L, Tao, Y, Xu, H, Xie, Y, Xiao, W, Yu, D, Kong, Y, Chen, G, Sun, X, Lian, F, Zhang, N, Wu, X, Mao, Z, Zhan, F, Zhu, W, Shi, J.
Deposit date:2019-12-17
Release date:2020-01-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Small-Molecule Inhibitor Targeting TRIP13 Suppresses Multiple Myeloma Progression.
Cancer Res., 80, 2020
5YJL
DownloadVisualize
BU of 5yjl by Molmil
Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with NADPH and GBP
Descriptor: Glutamyl-tRNA reductase 1, Glutamyl-tRNA reductase-binding protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhao, A, Han, F.
Deposit date:2017-10-11
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Arabidopsis thaliana glutamyl-tRNAGlureductase in complex with NADPH and glutamyl-tRNAGlureductase binding protein
Photosyn. Res., 137, 2018
7BBJ
DownloadVisualize
BU of 7bbj by Molmil
CD73 in complex with the humanized antagonistic antibody mAb19
Descriptor: 5'-nucleotidase, MAGNESIUM ION, ZINC ION, ...
Authors:Boettcher, J, Han, F.
Deposit date:2020-12-17
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:A Novel Antagonistic CD73 Antibody for Inhibition of the Immunosuppressive Adenosine Pathway.
Mol.Cancer Ther., 20, 2021
4U63
DownloadVisualize
BU of 4u63 by Molmil
Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, DNA photolyase, ...
Authors:Scheerer, P, Zhang, F, Kalms, J, von Stetten, D, Krauss, N, Oberpichler, I, Lamparter, T.
Deposit date:2014-07-26
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways.
J.Biol.Chem., 290, 2015
6UI4
DownloadVisualize
BU of 6ui4 by Molmil
Crystal structure of phenamacril-bound F. graminearum myosin I
Descriptor: Calmodulin, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Zhou, Y, Zhou, X.E, Gong, Y, Zhu, Y, Xu, H.E, Zhou, M, Melcher, K, Zhang, F.
Deposit date:2019-09-30
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of Fusarium myosin I inhibition by phenamacril.
Plos Pathog., 16, 2020
4YVO
DownloadVisualize
BU of 4yvo by Molmil
Crystal Structure of the TPR Domain of Arabidopsis FLU (FLU-TPR)
Descriptor: Protein FLUORESCENT IN BLUE LIGHT, chloroplastic
Authors:Zhang, M, Zhang, F, Liu, L.
Deposit date:2015-03-20
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase.
J.Biol.Chem., 290, 2015
4YVQ
DownloadVisualize
BU of 4yvq by Molmil
Crystal Structure of FLU-TPR in Complex with the C-terminal Region of GluTR
Descriptor: Glutamyl-tRNA reductase 1, chloroplastic, Protein FLUORESCENT IN BLUE LIGHT
Authors:Zhang, M, Zhang, F, Liu, L.
Deposit date:2015-03-20
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:The Non-canonical Tetratricopeptide Repeat (TPR) Domain of Fluorescent (FLU) Mediates Complex Formation with Glutamyl-tRNA Reductase.
J.Biol.Chem., 290, 2015
6T2P
DownloadVisualize
BU of 6t2p by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
8FN6
DownloadVisualize
BU of 8fn6 by Molmil
Cryo-EM structure of RNase-untreated RESC-A in trypanosomal RNA editing
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, RNA-editing substrate-binding complex protein 1 (RESC1), RNA-editing substrate-binding complex protein 2 (RESC2), ...
Authors:Liu, S, Wang, H, Li, X, Zhang, F, Lee, J.K.J, Li, Z, Yu, C, Zhao, X, Hu, J.J, Suematsu, T, Alvarez-Cabrera, A.L, Liu, Q, Zhang, L, Huang, L, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
Deposit date:2022-12-27
Release date:2023-07-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Science, 381, 2023
8FNF
DownloadVisualize
BU of 8fnf by Molmil
Cryo-EM structure of RNase-untreated RESC-C in trypanosomal RNA editing
Descriptor: Mitochondrial RNA binding complex 1 subunit, Mitochondrial RNA binding protein, Phytanoyl-CoA dioxygenase family protein, ...
Authors:Liu, S, Wang, H, Li, X, Zhang, F, Lee, J.K.J, Li, Z, Yu, C, Zhao, X, Hu, J.J, Suematsu, T, Alvarez-Cabrera, A.L, Liu, Q, Zhang, L, Huang, L, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H.
Deposit date:2022-12-27
Release date:2023-07-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Science, 381, 2023

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon