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PDB: 44 results

7Z28
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BU of 7z28 by Molmil
High-resolution crystal structure of ERAP1 with bound bestatin analogue inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Papakyriakou, A, Stratikos, E, Vourloumis, D.
Deposit date:2022-02-26
Release date:2022-07-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Selective Nanomolar Inhibitors for Insulin-Regulated Aminopeptidase Based on alpha-Hydroxy-beta-amino Acid Derivatives of Bestatin.
J.Med.Chem., 65, 2022
6Q4R
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High-resolution crystal structure of ERAP1 with bound phosphinic transition-state analogue inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Neu, M, Rowland, P, Stratikos, E.
Deposit date:2018-12-06
Release date:2019-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-Resolution Crystal Structure of Endoplasmic Reticulum Aminopeptidase 1 with Bound Phosphinic Transition-State Analogue Inhibitor.
Acs Med.Chem.Lett., 10, 2019
4UY2
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Crystal structure of the complex of the extracellular domain of human alpha9 nAChR with alpha-bungarotoxin.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-BUNGAROTOXIN ISOFORM V31, NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-9
Authors:Giastas, P, Zouridakis, M, Zarkadas, E, Tzartos, S.J.
Deposit date:2014-08-28
Release date:2014-10-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Crystal Structures of Free and Antagonist-Bound States of Human Alpha9 Nicotinic Receptor Extracellular Domain
Nat.Struct.Mol.Biol., 21, 2014
4V33
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BU of 4v33 by Molmil
Crystal structure of the putative polysaccharide deacetylase BA0330 from bacillus anthracis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, POLYSACCHARIDE DEACETYLASE-LIKE PROTEIN, ...
Authors:Giastas, P, Andreou, A, Bouriotis, V, Eliopoulos, E.
Deposit date:2014-10-16
Release date:2015-04-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Two Putative Polysaccharide Deacetylases are Required for Osmotic Stability and Cell Shape Maintenance in Bacillus Anthracis.
J.Biol.Chem., 290, 2015
3EXY
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BU of 3exy by Molmil
Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum
Descriptor: Ferredoxin, IRON/SULFUR CLUSTER
Authors:Giastas, P, Saridakis, E, Mavridis, I.M.
Deposit date:2008-10-17
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Insight into the protein and solvent contributions to the reduction potentials of [4Fe-4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin.
J.Biol.Inorg.Chem., 14, 2009
2ZVS
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BU of 2zvs by Molmil
Crystal structure of the 2[4FE-4S] ferredoxin from escherichia coli
Descriptor: IRON/SULFUR CLUSTER, Uncharacterized ferredoxin-like protein yfhL
Authors:Giastas, P, Mavridis, M.I.
Deposit date:2008-11-18
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insight into the protein and solvent contributions to the reduction potentials of [4Fe-4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin
J.Biol.Inorg.Chem., 14, 2009
2FGO
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Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa
Descriptor: Ferredoxin, IRON/SULFUR CLUSTER
Authors:Giastas, P, Pinotsis, N, Mavridis, I.M.
Deposit date:2005-12-22
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:The structure of the 2[4Fe-4S] ferredoxin from Pseudomonas aeruginosa at 1.32-A resolution: comparison with other high-resolution structures of ferredoxins and contributing structural features to reduction potential values.
J.Biol.Inorg.Chem., 11, 2006
4D01
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BU of 4d01 by Molmil
Crystal Structure of the Extracellular Domain of the Human Alpha9 Nicotinic Acetylcholine Receptor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-9
Authors:Giastas, P, Zouridakis, M, Zarkadas, E, Tzartos, S.J.
Deposit date:2014-04-23
Release date:2014-10-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Crystal Structures of Free and Antagonist-Bound States of Human Alpha9 Nicotinic Receptor Extracellular Domain
Nat.Struct.Mol.Biol., 21, 2014
6GO1
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BU of 6go1 by Molmil
Crystal Structure of a Bacillus anthracis peptidoglycan deacetylase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Polysaccharide deacetylase-like protein, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2018-06-01
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:The putative polysaccharide deacetylase Ba0331: cloning, expression, crystallization and structure determination.
Acta Crystallogr.,Sect.F, 75, 2019
6HY7
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BU of 6hy7 by Molmil
Crystal structure of alpha9 nAChR extracellular domain in complex with alpha-conotoxin RgIA
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-conotoxin RgIA, ...
Authors:Giastas, P, Zouridakis, M.
Deposit date:2018-10-19
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal Structure of the Monomeric Extracellular Domain of alpha 9 Nicotinic Receptor Subunit in Complex With alpha-Conotoxin RgIA: Molecular Dynamics Insights Into RgIA Binding to alpha 9 alpha 10 Nicotinic Receptors.
Front Pharmacol, 10, 2019
6RQX
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BU of 6rqx by Molmil
High-resolution crystal structure of ERAP1 in complex with 10mer phosphinic peptide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Stratikos, E.
Deposit date:2019-05-16
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Mechanism for antigenic peptide selection by endoplasmic reticulum aminopeptidase 1.
Proc.Natl.Acad.Sci.USA, 2019
8A5U
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BU of 8a5u by Molmil
Crystal structure of the beta3 subunit extracellular domain of nicotinic acetylcholine receptor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, BICINE, ...
Authors:Giastas, P, Zouridakis, M.
Deposit date:2022-06-16
Release date:2022-08-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into the Role of beta 3 nAChR Subunit in the Activation of Nicotinic Receptors.
Molecules, 27, 2022
6RYF
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BU of 6ryf by Molmil
High-resolution crystal structure of ERAP1 in complex with 15mer phosphinic peptide
Descriptor: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Stratikos, E.
Deposit date:2019-06-10
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Mechanism for antigenic peptide selection by endoplasmic reticulum aminopeptidase 1.
Proc.Natl.Acad.Sci.USA, 2019
5FJV
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BU of 5fjv by Molmil
Crystal structure of the extracellular domain of alpha2 nicotinic acetylcholine receptor in pentameric assembly
Descriptor: EPIBATIDINE, NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-2
Authors:Giastas, P, Kouvatsos, N, Chroni-Tzartou, D, Tzartos, S.J.
Deposit date:2015-10-13
Release date:2016-08-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of a Human Neuronal Nachr Extracellular Domain in Pentameric Assembly: Ligand-Bound Alpah2 Homopentamer.
Proc.Natl.Acad.Sci.USA, 113, 2016
7P7P
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BU of 7p7p by Molmil
Crystal structure of ERAP2 aminopeptidase in complex with phosphinic pseudotripeptide((1R)-1-Amino-3-phenylpropyl){(2S)-3-[((2S)-1-amino-1-oxo-3-phenylpropan-2-yl)amino]-2-{[3-(2-hydroxyphenyl)-isoxazol-5-yl]methyl}-3-oxopropyl}phosphinic acid
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Giastas, P, Stratikos, E, Mpakali, A.
Deposit date:2021-07-20
Release date:2022-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Inhibitor-Dependent Usage of the S1' Specificity Pocket of ER Aminopeptidase 2.
Acs Med.Chem.Lett., 13, 2022
7PFS
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BU of 7pfs by Molmil
Crystal structure of ERAP2 aminopeptidase in complex with phosphinic pseudotripeptide ((1R)-1-Amino-3-phenylpropyl){2-([1,1:3,1-terphenyl]-5-ylmethyl)-3-[((2S)-1-amino-1-oxo-3-phenylpropan-2-yl)-amino]-3-oxopropyl}phosphinic acid
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Giastas, P, Stratikos, E, Mpakali, A.
Deposit date:2021-08-12
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Inhibitor-Dependent Usage of the S1' Specificity Pocket of ER Aminopeptidase 2.
Acs Med.Chem.Lett., 13, 2022
5N1J
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BU of 5n1j by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
Authors:Giastas, P, Andreou, A, Balomenou, S, Bouriotis, V, Eliopoulos, E.E.
Deposit date:2017-02-06
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
5N1P
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Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with N-hydroxynaphthalene-1-carboxamide
Descriptor: 1,2-ETHANEDIOL, Peptidoglycan N-acetylglucosamine deacetylase, SODIUM ION, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2017-02-06
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
5NCD
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Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with (2S)-2-amino-5-(diaminomethylideneamino)-N-hydroxypentanamide
Descriptor: ACETATE ION, CITRIC ACID, N-HYDROXY-L-ARGININAMIDE, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2017-03-03
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.447 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
5NC6
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BU of 5nc6 by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with (E)-N-hydroxy-3-(naphthalen-1-yl)prop-2-enamide
Descriptor: 1,2-ETHANEDIOL, 3-naphthalen-1-yl-~{N}-oxidanyl-propanamide, ACETATE ION, ...
Authors:Giastas, P, Andreou, A, Balomenou, S, Bouriotis, V, Eliopoulos, E.E.
Deposit date:2017-03-03
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
5NC9
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BU of 5nc9 by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus in complex with (2S)-2,6-diamino-N-hydroxyhexanamide
Descriptor: (2~{S})-2,6-bis(azanyl)-~{N}-oxidanyl-hexanamide, 1,2-ETHANEDIOL, CITRIC ACID, ...
Authors:Giastas, P, Andreou, A, Eliopoulos, E.E.
Deposit date:2017-03-03
Release date:2018-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
4UXU
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BU of 4uxu by Molmil
Crystal Structure of the Extracellular Domain of the Human Alpha9 Nicotinic Acetylcholine Receptor In Complex with Methyllycaconitine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Zouridakis, M, Giastas, P, Zarkadas, E, Tzartos, S.J.
Deposit date:2014-08-27
Release date:2014-10-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal Structures of Free and Antagonist-Bound States of Human Alpha9 Nicotinic Receptor Extracellular Domain
Nat.Struct.Mol.Biol., 21, 2014
8P0I
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BU of 8p0i by Molmil
Crystal structure of the open conformation of insulin-regulated aminopeptidase in complex with a small-MW inhibitor
Descriptor: 2-[2-(3,5-dimethylpyrazol-1-yl)-6-(4-methoxyphenyl)pyrimidin-4-yl]oxy-N-methyl-N-[(2-methylpyridin-3-yl)methyl]ethanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mpakali, A, Giastas, P, Stratikos, E.
Deposit date:2023-05-10
Release date:2024-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Stabilization of the open conformation omicron f insulin-regulated aminopeptidase by a novel substrate-selective small-molecule inhibitor.
Protein Sci., 33, 2024
5K1V
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BU of 5k1v by Molmil
Crystal structure of Endoplasmic Reticulum aminopeptidase 2 (ERAP2) in complex with a diaminobenzoic acid derivative ligand.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 2, ...
Authors:Saridakis, E, Papakyriakou, A, Giastas, P, Mpakali, A, Mavridis, I.M, Stratikos, E.
Deposit date:2016-05-18
Release date:2017-03-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.897 Å)
Cite:Crystal Structures of ERAP2 Complexed with Inhibitors Reveal Pharmacophore Requirements for Optimizing Inhibitor Potency.
ACS Med Chem Lett, 8, 2017
5CU5
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Crystal structure of ERAP2 without catalytic Zn(II) atom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 2, ...
Authors:Saridakis, E, Mathioudakis, N, Giastas, P, Mavridis, I.M, Stratikos, E.
Deposit date:2015-07-24
Release date:2015-09-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural Basis for Antigenic Peptide Recognition and Processing by Endoplasmic Reticulum (ER) Aminopeptidase 2.
J.Biol.Chem., 290, 2015

 

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