Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 44 results

1QA4
DownloadVisualize
BU of 1qa4 by Molmil
HIV-1 NEF ANCHOR DOMAIN, NMR, 2 STRUCTURES
Descriptor: Protein Nef
Authors:Geyer, M, Kalbitzer, H.R.
Deposit date:1999-04-12
Release date:1999-05-26
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Structure of the anchor-domain of myristoylated and non-myristoylated HIV-1 Nef protein.
J.Mol.Biol., 289, 1999
2RGF
DownloadVisualize
BU of 2rgf by Molmil
RBD OF RAL GUANOSINE-NUCLEOTIDE EXCHANGE FACTOR (PROTEIN), NMR, 10 STRUCTURES
Descriptor: RALGEF-RBD
Authors:Geyer, M, Herrmann, C, Wittinghofer, A, Kalbitzer, H.R.
Deposit date:1997-02-13
Release date:1998-03-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the Ras-binding domain of RalGEF and implications for Ras binding and signalling.
Nat.Struct.Biol., 4, 1997
4ORZ
DownloadVisualize
BU of 4orz by Molmil
HIV-1 Nef protein in complex with single domain antibody sdAb19 and an engineered Hck SH3 domain
Descriptor: Protein Nef, Tyrosine-protein kinase HCK, single domain antibody sdAb19
Authors:Geyer, M, Lulf, S.
Deposit date:2014-02-12
Release date:2014-03-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the inhibition of HIV-1 Nef by a high-affinity binding single-domain antibody.
Retrovirology, 11, 2014
1QA5
DownloadVisualize
BU of 1qa5 by Molmil
MYRISTOYLATED HIV-1 NEF ANCHOR DOMAIN, NMR, 2 STRUCTURES
Descriptor: PROTEIN (MYRISTOYLATED HIV-1 NEF ANCHOR DOMAIN (MYRISTATE-GLY2 TO TRP57))
Authors:Geyer, M, Kalbitzer, H.R.
Deposit date:1999-04-12
Release date:1999-05-26
Last modified:2022-12-21
Method:SOLUTION NMR
Cite:Structure of the anchor-domain of myristoylated and non-myristoylated HIV-1 Nef protein.
J.Mol.Biol., 289, 1999
9FMR
DownloadVisualize
BU of 9fmr by Molmil
Structure of DDB1/Cdk12/Cyclin K with molecular glue SR-4835
Descriptor: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ...
Authors:Anand, K, Schmitz, M, Geyer, M.
Deposit date:2024-06-07
Release date:2024-10-16
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of DDB1/Cdk12/Cyclin K with molecular glue SR-4835
To Be Published
1ZTN
DownloadVisualize
BU of 1ztn by Molmil
INACTIVATION GATE OF POTASSIUM CHANNEL RAW3, NMR, 8 STRUCTURES
Descriptor: Potassium voltage-gated channel subfamily C member 4
Authors:Antz, C, Geyer, M, Fakler, B, Schott, M, Frank, R, Guy, H.R, Ruppersberg, J.P, Kalbitzer, H.R.
Deposit date:1996-11-15
Release date:1997-06-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of inactivation gates from mammalian voltage-dependent potassium channels.
Nature, 385, 1997
3JVK
DownloadVisualize
BU of 3jvk by Molmil
Crystal structure of bromodomain 1 of mouse Brd4 in complex with histone H3-K(ac)14
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, histone H3.3 peptide
Authors:Vollmuth, F, Blankenfeldt, W, Geyer, M.
Deposit date:2009-09-17
Release date:2009-10-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the Dual Bromodomains of the P-TEFb-activating Protein Brd4 at Atomic Resolution
J.Biol.Chem., 284, 2009
3BW6
DownloadVisualize
BU of 3bw6 by Molmil
Crystal structure of the longin domain of yeast Ykt6
Descriptor: SULFATE ION, Synaptobrevin homolog YKT6
Authors:Pylypenko, O, Schonichen, A, Ludwig, D, Ungermann, C, Goody, R.S, Rak, A, Geyer, M.
Deposit date:2008-01-08
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Farnesylation of the SNARE protein Ykt6 increases its stability and helical folding.
J.Mol.Biol., 377, 2008
8P81
DownloadVisualize
BU of 8p81 by Molmil
Crystal structure of human Cdk12/Cyclin K in complex with inhibitor SR-4835
Descriptor: Cyclin-K, Cyclin-dependent kinase 12, ~{N}-[[5,6-bis(chloranyl)-1~{H}-benzimidazol-2-yl]methyl]-9-(1-methylpyrazol-4-yl)-2-morpholin-4-yl-purin-6-amine
Authors:Anand, K, Schmitz, M, Geyer, M.
Deposit date:2023-05-31
Release date:2023-11-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:The reversible inhibitor SR-4835 binds Cdk12/cyclin K in a noncanonical G-loop conformation.
J.Biol.Chem., 300, 2023
8PYR
DownloadVisualize
BU of 8pyr by Molmil
Crystal structure of the dual T-loop phosphorylated Cdk7/CycH/Mat1 complex
Descriptor: 1,2-ETHANEDIOL, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
Authors:Anand, K, Duster, R, Geyer, M.
Deposit date:2023-07-26
Release date:2024-03-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of Cdk7 activation by dual T-loop phosphorylation.
Biorxiv, 2024
3DAD
DownloadVisualize
BU of 3dad by Molmil
Crystal structure of the N-terminal regulatory domains of the formin FHOD1
Descriptor: FH1/FH2 domain-containing protein 1
Authors:Schulte, A, Stolp, B, Schonichen, A, Pylypenko, O, Rak, A, Fackler, O.T, Geyer, M.
Deposit date:2008-05-29
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Human Formin FHOD1 Contains a Bipartite Structure of FH3 and GTPase-Binding Domains Required for Activation.
Structure, 16, 2008
7PZC
DownloadVisualize
BU of 7pzc by Molmil
Cryo-EM structure of the NLRP3 decamer bound to the inhibitor CRID3
Descriptor: 1-(1,2,3,5,6,7-hexahydro-s-indacen-4-yl)-3-[4-(2-oxidanylpropan-2-yl)furan-2-yl]sulfonyl-urea, ADENOSINE-5'-DIPHOSPHATE, NACHT, ...
Authors:Hochheiser, I.V, Pilsl, M, Hagelueken, G, Engel, C, Geyer, M.
Deposit date:2021-10-12
Release date:2022-01-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the NLRP3 decamer bound to the cytokine release inhibitor CRID3.
Nature, 604, 2022
6Z2G
DownloadVisualize
BU of 6z2g by Molmil
Crystal structure of human NLRP9 PYD
Descriptor: NACHT, LRR and PYD domains-containing protein 9
Authors:Marleaux, M, Anand, K, Geyer, M.
Deposit date:2020-05-15
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the human NLRP9 pyrin domain suggests a distinct mode of inflammasome assembly.
Febs Lett., 594, 2020
7Z1X
DownloadVisualize
BU of 7z1x by Molmil
Crystal structure of human Gasdermin D complexed with nanobodies VHH-2 and VHH-6
Descriptor: Gasdermin-D, VHH-2, VHH-6
Authors:Kopp, A, Hagelueken, G, Geyer, M.
Deposit date:2022-02-25
Release date:2023-09-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pyroptosis inhibiting nanobodies block Gasdermin D pore formation.
Nat Commun, 14, 2023
5EFQ
DownloadVisualize
BU of 5efq by Molmil
Crystal structure of human Cdk13/Cyclin K in complex with ADP-aluminum fluoride
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Cyclin-K, ...
Authors:Hoenig, D, Greifenberg, A.K, Anand, K, Geyer, M.
Deposit date:2015-10-24
Release date:2015-12-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Analysis of the Cdk13/Cyclin K Complex.
Cell Rep, 14, 2016
7PZD
DownloadVisualize
BU of 7pzd by Molmil
Cryo-EM structure of the NLRP3 PYD filament
Descriptor: NACHT, LRR and PYD domains-containing protein 3
Authors:Hochheiser, I.V, Hagelueken, G, Behrmann, H, Behrmann, E, Geyer, M.
Deposit date:2021-10-12
Release date:2022-04-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Directionality of PYD filament growth determined by the transition of NLRP3 nucleation seeds to ASC elongation.
Sci Adv, 8, 2022
4NST
DownloadVisualize
BU of 4nst by Molmil
Crystal structure of human Cdk12/Cyclin K in complex with ADP-aluminum fluoride
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
Authors:Boesken, C.A, Farnung, L, Anand, K, Geyer, M.
Deposit date:2013-11-29
Release date:2014-03-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure and substrate specificity of human Cdk12/Cyclin K.
Nat Commun, 5, 2014
1ZTO
DownloadVisualize
BU of 1zto by Molmil
INACTIVATION GATE OF POTASSIUM CHANNEL RCK4, NMR, 8 STRUCTURES
Descriptor: POTASSIUM CHANNEL PROTEIN RCK4
Authors:Antz, C, Geyer, M, Fakler, B, Schott, M, Frank, R, Guy, H.R, Ruppersberg, J.P, Kalbitzer, H.R.
Deposit date:1996-11-15
Release date:1997-06-05
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR structure of inactivation gates from mammalian voltage-dependent potassium channels.
Nature, 385, 1997
3MUL
DownloadVisualize
BU of 3mul by Molmil
Crystal structure of Brd4 bromodomain 1 with butyrylated histone H3-K(buty)14
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, Peptide of Histone H3.3
Authors:Vollmuth, F, Geyer, M.
Deposit date:2010-05-03
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Interaction of propionylated and butyrylated histone H3 lysine marks with Brd4 bromodomains
Angew.Chem.Int.Ed.Engl., 49, 2010
3MUK
DownloadVisualize
BU of 3muk by Molmil
Crystal structure of Brd4 bromodomain 1 with propionylated histone H3-K(prop)23
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, peptide of Histone H3.3
Authors:Vollmuth, F, Geyer, M.
Deposit date:2010-05-03
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Interaction of propionylated and butyrylated histone H3 lysine marks with Brd4 bromodomains
Angew.Chem.Int.Ed.Engl., 49, 2010
4YDH
DownloadVisualize
BU of 4ydh by Molmil
The structure of human FMNL1 N-terminal domains bound to Cdc42
Descriptor: Cell division control protein 42 homolog, Formin-like protein 1, MAGNESIUM ION, ...
Authors:Kuhn, S, Anand, K, Geyer, M.
Deposit date:2015-02-22
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The structure of FMNL2-Cdc42 yields insights into the mechanism of lamellipodia and filopodia formation.
Nat Commun, 6, 2015
4YC7
DownloadVisualize
BU of 4yc7 by Molmil
Crystal structure of human FMNL2 GBD-FH3 Domains bound to Cdc42-GppNHp
Descriptor: Cell division control protein 42 homolog, Formin-like protein 2, MAGNESIUM ION, ...
Authors:Kuhn, S, Geyer, M.
Deposit date:2015-02-19
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of FMNL2-Cdc42 yields insights into the mechanism of lamellipodia and filopodia formation.
Nat Commun, 6, 2015
8CMU
DownloadVisualize
BU of 8cmu by Molmil
High resolution structure of the coagulation Factor XIII A2B2 heterotetramer complex.
Descriptor: Coagulation factor XIII A chain, Coagulation factor XIII B chain
Authors:Singh, S, Urgular, D, Hagelueken, G, Geyer, M, Biswas, A.
Deposit date:2023-02-21
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:The cryo-EM structure of the plasma coagulation Factor XIII complex at 2.68 Angstrom resolution.
To Be Published
8CMT
DownloadVisualize
BU of 8cmt by Molmil
Structure of the plasma coagulation Factor XIII A2B2 heterotetrameric complex.
Descriptor: Coagulation factor XIII A chain, Coagulation factor XIII B chain
Authors:Singh, S, Ugurlar, D, Hagelueken, G, Geyer, M, Biswas, A.
Deposit date:2023-02-21
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:The cryo-EM structure of plasma coagulation Factor XIII heterotetrameric complex at 2.68 Angstrom resolution.
To Be Published
1G6P
DownloadVisualize
BU of 1g6p by Molmil
SOLUTION NMR STRUCTURE OF THE COLD SHOCK PROTEIN FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA
Descriptor: COLD SHOCK PROTEIN TMCSP
Authors:Kremer, W, Schuler, B, Harrieder, S, Geyer, M, Gronwald, W, Welker, C, Jaenicke, R, Kalbitzer, H.R.
Deposit date:2000-11-07
Release date:2001-11-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure of the cold-shock protein from the hyperthermophilic bacterium Thermotoga maritima.
Eur.J.Biochem., 268, 2001

 

12>

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon