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PDB: 119 results

8Y46
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-KDF or L-2,4-DKDF
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, L-2,4-diketo-3-deoxyfuconate, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y11
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to NAD(H) and sulfate ion
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y4B
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-2,4-DKDF and NADH
Descriptor: L-2,4-diketo-3-deoxyfuconate, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SDR family oxidoreductase
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8Y4J
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BU of 8y4j by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to D-KDP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-2-keto-3-deoxypentonate, DI(HYDROXYETHYL)ETHER, ...
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-30
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8XWK
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase from Herbaspillum huttiense (apo form)
Descriptor: DI(HYDROXYETHYL)ETHER, SDR family oxidoreductase
Authors:Akagashi, M, Watanabe, S.
Deposit date:2024-01-16
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
1Q61
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BU of 1q61 by Molmil
PKA triple mutant model of PKB
Descriptor: N-OCTANOYL-N-METHYLGLUCAMINE, cAMP-dependent protein kinase inhibitor, alpha form, ...
Authors:Gassel, M, Breitenlechner, C.B, Rueger, P, Jucknischke, U, Schneider, T, Huber, R, Bossemeyer, D, Engh, R.A.
Deposit date:2003-08-12
Release date:2003-09-30
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mutants of protein kinase A that mimic the ATP-binding site of protein kinase B (AKT)
J.Mol.Biol., 329, 2003
1Q62
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BU of 1q62 by Molmil
PKA double mutant model of PKB
Descriptor: cAMP-dependent protein kinase inhibitor, alpha form, cAMP-dependent protein kinase, ...
Authors:Gassel, M, Breitenlechner, C.B, Rueger, P, Jucknischke, U, Schneider, T, Huber, R, Bossemeyer, D, Engh, R.A.
Deposit date:2003-08-12
Release date:2003-09-30
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutants of protein kinase A that mimic the ATP-binding site of protein kinase B (AKT)
J.Mol.Biol., 329, 2003
1Q24
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BU of 1q24 by Molmil
PKA double mutant model of PKB in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, cAMP-dependent Protein Kinase Inhibitor, ...
Authors:Gassel, M, Breitenlechner, C.B, Rueger, P, Jucknischke, U, Schneider, T, Huber, R, Bossemeyer, D, Engh, R.A.
Deposit date:2003-07-23
Release date:2003-08-19
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Mutants of protein kinase A that mimic the ATP-binding site of protein kinase B (AKT)
J.Mol.Biol., 329, 2003
1SZM
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BU of 1szm by Molmil
DUAL BINDING MODE OF BISINDOLYLMALEIMIDE 2 TO PROTEIN KINASE A (PKA)
Descriptor: 3-(1H-INDOL-3-YL)-4-{1-[2-(1-METHYLPYRROLIDIN-2-YL)ETHYL]-1H-INDOL-3-YL}-1H-PYRROLE-2,5-DIONE, cAMP-dependent protein kinase, alpha-catalytic subunit
Authors:Gassel, M, Breitenlechner, C.B, Koenig, N, Huber, R, Engh, R.A, Bossemeyer, D.
Deposit date:2004-04-06
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The protein kinase C inhibitor bisindolyl maleimide 2 binds with reversed orientations to different conformations of protein kinase a.
J.Biol.Chem., 279, 2004
3P27
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Crystal structure of S. cerevisiae Hbs1 protein (GDP-bound form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota
Descriptor: Elongation factor 1 alpha-like protein, GUANOSINE-5'-DIPHOSPHATE
Authors:van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG)
Deposit date:2010-10-01
Release date:2010-11-17
Last modified:2012-03-14
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.
Nat.Struct.Mol.Biol., 17, 2010
4A9A
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BU of 4a9a by Molmil
Structure of Rbg1 in complex with Tma46 dfrp domain
Descriptor: RIBOSOME-INTERACTING GTPASE 1, TRANSLATION MACHINERY-ASSOCIATED PROTEIN 46
Authors:Francis, S.M, Gas, M, Daugeron, M, Seraphin, B, Bravo, J.
Deposit date:2011-11-25
Release date:2012-10-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Rbg1-Tma46 Dimer Structure Reveals New Functional Domains and Their Role in Polysome Recruitment.
Nucleic Acids Res., 40, 2012
3P26
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BU of 3p26 by Molmil
Crystal structure of S. cerevisiae Hbs1 protein (apo-form), a translational GTPase involved in RNA quality control pathways and interacting with Dom34/Pelota
Descriptor: Elongation factor 1 alpha-like protein
Authors:van den Elzen, A, Henri, J, Lazar, N, Gas, M.E, Durand, D, Lacroute, F, Nicaise, M, van Tilbeurgh, H, Sraphin, B, Graille, M, Paris-Sud Yeast Structural Genomics (YSG)
Deposit date:2010-10-01
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways.
Nat.Struct.Mol.Biol., 17, 2010
8CAV
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BU of 8cav by Molmil
Discovery of the lanthipeptide Curvocidin and structural insights into its trifunctional synthetase CuvL
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CuvA, MAGNESIUM ION, ...
Authors:Sigurdsson, A, Martins, B.M, Duettmann, S.A, Jasyk, M, Dimos-Roehl, B, Schoepf, F, Gemannter, M, Knittel, C.H, Schnegotyzki, R, Schmid, B, Kosol, S, Gonzalez-Viegas, M, Seidel, M, Huegelland, M, Leimkuehler, S, Dobbek, H, Mainz, A, Suessmuth, R.
Deposit date:2023-01-24
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Discovery of the Lanthipeptide Curvocidin and Structural Insights into its Trifunctional Synthetase CuvL.
Angew.Chem.Int.Ed.Engl., 62, 2023
8CAR
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BU of 8car by Molmil
Discovery of the lanthipeptide Curvocidin and structural insights into its trifunctional synthetase CuvL
Descriptor: NITRATE ION, PHOSPHATE ION, Serine/threonine protein kinase
Authors:Martins, B.M, Sigurdsson, A, Duettmann, A.A, Jasyk, M, Dimos-Roehl, B, Schoepf, F, Gemander, M, Knittel, C.H, Schegotzki, R, Schmid, B, Kosol, S, Pommerening, L, Gonzalez-Viegas, M, Seidel, M, Huegelland, M, Leimkuehler, S, Dobbek, H, Mainz, A, Suessmuth, R.
Deposit date:2023-01-24
Release date:2023-06-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of the Lanthipeptide Curvocidin and Structural Insights into its Trifunctional Synthetase CuvL.
Angew.Chem.Int.Ed.Engl., 62, 2023
3CZX
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BU of 3czx by Molmil
The crystal structure of the putative N-acetylmuramoyl-L-alanine amidase from Neisseria meningitidis
Descriptor: Putative N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Zhang, R, Zhou, M, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-30
Release date:2008-07-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the putative N-acetylmuramoyl-L-alanine amidase from Neisseria meningitidis.
To be Published
3VOT
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BU of 3vot by Molmil
Crystal structure of L-amino acid ligase from Bacillus licheniformis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ...
Authors:Suzuki, M, Takahashi, Y, Noguchi, A, Arai, T, Yagasaki, M, Kino, K, Saito, J.
Deposit date:2012-02-08
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of L-amino-acid ligase from Bacillus licheniformis
Acta Crystallogr.,Sect.D, 68, 2012
6RZ7
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BU of 6rz7 by Molmil
Crystal structure of the human cysteinyl leukotriene receptor 2 in complex with ONO-2570366 (F222 space group)
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-8-[[4-[4-(2-chloranyl-5-fluoranyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3- dihydro-1,4-benzoxazine-2-carboxylic acid, CHOLESTEROL, ...
Authors:Gusach, A, Luginina, A, Marin, E, Brouillette, R.L, Besserer-Offroy, E, Longpre, J.M, Ishchenko, A, Popov, P, Fujimoto, T, Maruyama, T, Stauch, B, Ergasheva, M, Romanovskaya, D, Stepko, A, Kovalev, K, Shevtsov, M, Gordeliy, V, Han, G.W, Sarret, P, Katritch, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
Deposit date:2019-06-12
Release date:2019-12-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.
Nat Commun, 10, 2019
6RZ9
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Crystal structure of the human cysteinyl leukotriene receptor 2 in complex with ONO-2770372
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-8-[[4-[4-(5-fluoranyl-2-methyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3-dih ydro-1,4-benzoxazine-2-carboxylic acid, CHOLESTEROL, ...
Authors:Gusach, A, Luginina, A, Marin, E, Brouillette, R.L, Besserer-Offroy, E, Longpre, J.M, Ishchenko, A, Popov, P, Fujimoto, T, Maruyama, T, Stauch, B, Ergasheva, M, Romanovskaya, D, Stepko, A, Kovalev, K, Shevtsov, M, Gordeliy, V, Han, G.W, Sarret, P, Katritch, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
Deposit date:2019-06-12
Release date:2019-12-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.
Nat Commun, 10, 2019
6RZ8
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BU of 6rz8 by Molmil
Crystal structure of the human cysteinyl leukotriene receptor 2 in complex with ONO-2080365
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-8-[[4-[4-[2,3-bis(fluoranyl)phenoxy]butoxy]-2-fluoranyl-phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-but yl)-2,3-dihydro-1,4-benzoxazine-2-carboxylic acid, Cysteinyl leukotriene receptor 2,Soluble cytochrome b562,Cysteinyl leukotriene receptor 2, ...
Authors:Gusach, A, Luginina, A, Marin, E, Brouillette, R.L, Besserer-Offroy, E, Longpre, J.M, Ishchenko, A, Popov, P, Fujimoto, T, Maruyama, T, Stauch, B, Ergasheva, M, Romanovskaya, D, Stepko, A, Kovalev, K, Shevtsov, M, Gordeliy, V, Han, G.W, Sarret, P, Katritch, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
Deposit date:2019-06-12
Release date:2019-12-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.
Nat Commun, 10, 2019
2G03
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BU of 2g03 by Molmil
Structure of a putative cell filamentation protein from Neisseria meningitidis.
Descriptor: ACETIC ACID, ISOPROPYL ALCOHOL, hypothetical protein NMA0004
Authors:Cuff, M.E, Bigelow, L, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-02-10
Release date:2006-03-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a putative cell filamentation protein from Neisseria meningitidis.
To be Published
2R5R
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BU of 2r5r by Molmil
The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718
Descriptor: IMIDAZOLE, PHOSPHATE ION, UPF0343 protein NE1163
Authors:Tan, K, Wu, R, Nocek, B, Bigelow, L, Patterson, S, Freeman, L, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-04
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718.
To be Published
2GTQ
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BU of 2gtq by Molmil
Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis
Descriptor: SULFATE ION, ZINC ION, aminopeptidase N
Authors:Nocek, B, Mulligan, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-28
Release date:2006-05-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of aminopeptidase N from human pathogen Neisseria meningitidis.
Proteins, 70, 2007
2GBO
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BU of 2gbo by Molmil
Protein of Unknown Function EF2458 from Enterococcus faecalis
Descriptor: UPF0358 protein EF2458
Authors:Osipiuk, J, Wu, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of conserved hypothetical protein EF_2458 from Enterococcus faecalis.
To be Published
2GNI
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BU of 2gni by Molmil
PKA fivefold mutant model of Rho-kinase with inhibitor Fasudil (HA1077)
Descriptor: 5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE, cAMP-dependent protein kinase inhibitor alpha, cAMP-dependent protein kinase, ...
Authors:Bonn, S, Herrero, S, Breitenlechner, C.B, Engh, R.A, Gassel, M, Bossemeyer, D.
Deposit date:2006-04-10
Release date:2006-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural analysis of protein kinase A mutants with Rho-kinase inhibitor specificity
J.Biol.Chem., 281, 2006
2GNL
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BU of 2gnl by Molmil
PKA threefold mutant model of Rho-kinase with inhibitor H-1152P
Descriptor: (S)-2-METHYL-1-[(4-METHYL-5-ISOQUINOLINE)SULFONYL]-HOMOPIPERAZINE, cAMP-dependent protein kinase inhibitor alpha, cAMP-dependent protein kinase, ...
Authors:Bonn, S, Herrero, S, Breitenlechner, C.B, Engh, R.A, Gassel, M, Bossemeyer, D.
Deposit date:2006-04-10
Release date:2006-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of protein kinase A mutants with Rho-kinase inhibitor specificity
J.Biol.Chem., 281, 2006

222624

PDB entries from 2024-07-17

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